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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL81825_cuf0 >transcript:BL81825_cuf0-protein ID=transcript:BL81825_cuf0-protein|Name=transcript:BL81825_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=505bp
PSCDPVMLGDTPISSLLWADDLVLVSKSEQGLKECLERMDKFCTRWKLSI
NRDKTKVMIFSKNARTGNSRNHSFQSQGQTLNITNFYTYLGVDITPSGSF
HRATKQLRIKALRASFKLKSILMSNHNPSIPLALDLFNSLVKPILLYCSE
ILGTNVQSRDLILHGITENPNENIRKSVSDIISPVLGSDVSIRKATRVGK
KTEPSSTRPVLLRLSRYSDKLNIIYRSSDLANQNITVVQPSISYEISDLE
YVLLNFCKILLRVPKSSVNAAVRGELGMYPLYIDTQTQMVKYWIRLNSMP
NDRIVKKAYDEAVRQEQDWVVHIRDTLCRHGLQSIWLNPTVDAKYFGEMF
KERLKGEFLSSWRQTIRSFKKLETYSKIKTDFHIENYLQSVQNKSFITHT
TKLRIGAHCLEIEKGRHRNVPANQRFCPTCKENVEDEYHFLMECPTYKDE
RVKLLQTIKCKTNVTLPQSKTETFRVLMSCPETISIYLGQYIFTSMQKRI
REISI Run BLAST on NCBI mRNA from alignment at Sc0000250:339006..340806+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL81825_cuf0 ID=transcript:BL81825_cuf0|Name=transcript:BL81825_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=1801bp|location=Sequence derived from alignment at Sc0000250:339006..340806+ (Branchiostoma lanceolatum)
CACCATCATGCGACCCCGTAATGCTTGGAGACACTCCGATAAGCAGCCTT
CTCTGGGCGGACGATCTTGTACTCGTCTCAAAATCTGAGCAAGGGCTAAA
GGAGTGTCTCGAAAGAATGGATAAGTTCTGCACACGTTGGAAGCTTTCAA
TCAATAGAGACAAAACTAAAGTTATGATATTTTCTAAAAATGCGCGAACA
GGTAATAGCCGAAACCATAGTTTCCAATCACAGGGACAAACTTTAAACAT
AACTAACTTCTATACATACTTAGGGGTAGATATAACACCCTCTGGTTCTT
TTCATCGAGCAACAAAACAACTTAGAATAAAAGCCCTCCGGGCTTCTTTT
AAACTAAAGTCCATCCTCATGTCAAATCATAACCCATCCATACCTCTGGC
ACTTGATCTATTTAATAGCCTAGTTAAACCAATCCTGCTATATTGTAGTG
AAATATTGGGAACAAATGTTCAGTCACGAGACCTCATACTTCATGGAATA
ACTGAGAATCCAAATGAGAACATTAGGAAATCTGTATCCGACATAATATC
TCCGGTTTTAGGATCAGATGTGAGTATCCGTAAGGCAACCCGTGTCGGGA
AAAAAACCGAACCATCTTCTACTCGACCTGTTCTTCTACGACTTAGTAGA
TACAGTGACAAGCTAAATATTATATATCGATCTAGTGATCTAGCAAACCA
AAATATAACAGTGGTCCAACCATCAATTTCGTACGAAATTTCCGATCTAG
AATATGTTTTACTAAATTTCTGCAAGATACTCCTTCGCGTCCCCAAAAGT
TCGGTTAACGCTGCTGTGAGAGGCGAATTGGGTATGTATCCATTATACAT
AGATACTCAGACTCAAATGGTTAAATACTGGATAAGATTAAACAGCATGC
CGAACGACAGAATTGTTAAAAAGGCGTATGACGAAGCCGTTAGACAAGAA
CAAGACTGGGTTGTTCATATACGTGATACACTTTGCAGACATGGACTCCA
AAGCATTTGGTTGAACCCTACCGTCGATGCCAAATATTTCGGAGAAATGT
TTAAGGAGCGCCTGAAAGGCGAGTTTCTGTCAAGCTGGCGGCAAACGATA
AGAAGCTTTAAGAAACTTGAAACATATTCAAAAATAAAAACCGACTTTCA
TATAGAGAACTACCTCCAGTCAGTCCAAAACAAATCCTTCATAACACACA
CAACAAAACTCCGTATTGGAGCACACTGTCTTGAAATTGAAAAAGGCAGA
CACCGAAATGTCCCAGCCAATCAGAGATTCTGTCCTACGTGTAAAGAAAA
TGTCGAAGACGAATACCACTTTTTAATGGAATGTCCAACATATAAAGATG
AAAGAGTGAAGTTATTGCAGACAATCAAGTGTAAAACAAATGTAACATTA
CCTCAGTCGAAAACAGAGACGTTCCGTGTACTTATGTCATGTCCTGAAAC
AATATCTATATATCTAGGCCAATATATTTTTACATCTATGCAAAAAAGAA
TCCGTGAAATATCGATTTAGTTGTATAAGACATTCATCTCTTCGCCATGT
TATTGTATAATTGACATATACGGCTCCATATTGTATCACCTGTTGATATT
TTCTACCTCTGATAATATTATATAGATAGTGCTTTCTTGTAGTTTGAAAT
GGAACATTGTACAGCCTAGAACCTAATCATTGTATAGCATTGAACCTTCC
TGTAGCTTTTAGTAGTTTGATATAAGTAGCCAGTAGCATTTTATCTTTGC
CTTACATTGTACCTGTTACAATCGTTGTGCAATAAACTTTGACTTGACTT
G Coding sequence (CDS) from alignment at Sc0000250:339006..340806+ >transcript:BL81825_cuf0 ID=transcript:BL81825_cuf0|Name=transcript:BL81825_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=1518bp|location=Sequence derived from alignment at Sc0000250:339006..340806+ (Branchiostoma lanceolatum)
CCATCATGCGACCCCGTAATGCTTGGAGACACTCCGATAAGCAGCCTTCT
CTGGGCGGACGATCTTGTACTCGTCTCAAAATCTGAGCAAGGGCTAAAGG
AGTGTCTCGAAAGAATGGATAAGTTCTGCACACGTTGGAAGCTTTCAATC
AATAGAGACAAAACTAAAGTTATGATATTTTCTAAAAATGCGCGAACAGG
TAATAGCCGAAACCATAGTTTCCAATCACAGGGACAAACTTTAAACATAA
CTAACTTCTATACATACTTAGGGGTAGATATAACACCCTCTGGTTCTTTT
CATCGAGCAACAAAACAACTTAGAATAAAAGCCCTCCGGGCTTCTTTTAA
ACTAAAGTCCATCCTCATGTCAAATCATAACCCATCCATACCTCTGGCAC
TTGATCTATTTAATAGCCTAGTTAAACCAATCCTGCTATATTGTAGTGAA
ATATTGGGAACAAATGTTCAGTCACGAGACCTCATACTTCATGGAATAAC
TGAGAATCCAAATGAGAACATTAGGAAATCTGTATCCGACATAATATCTC
CGGTTTTAGGATCAGATGTGAGTATCCGTAAGGCAACCCGTGTCGGGAAA
AAAACCGAACCATCTTCTACTCGACCTGTTCTTCTACGACTTAGTAGATA
CAGTGACAAGCTAAATATTATATATCGATCTAGTGATCTAGCAAACCAAA
ATATAACAGTGGTCCAACCATCAATTTCGTACGAAATTTCCGATCTAGAA
TATGTTTTACTAAATTTCTGCAAGATACTCCTTCGCGTCCCCAAAAGTTC
GGTTAACGCTGCTGTGAGAGGCGAATTGGGTATGTATCCATTATACATAG
ATACTCAGACTCAAATGGTTAAATACTGGATAAGATTAAACAGCATGCCG
AACGACAGAATTGTTAAAAAGGCGTATGACGAAGCCGTTAGACAAGAACA
AGACTGGGTTGTTCATATACGTGATACACTTTGCAGACATGGACTCCAAA
GCATTTGGTTGAACCCTACCGTCGATGCCAAATATTTCGGAGAAATGTTT
AAGGAGCGCCTGAAAGGCGAGTTTCTGTCAAGCTGGCGGCAAACGATAAG
AAGCTTTAAGAAACTTGAAACATATTCAAAAATAAAAACCGACTTTCATA
TAGAGAACTACCTCCAGTCAGTCCAAAACAAATCCTTCATAACACACACA
ACAAAACTCCGTATTGGAGCACACTGTCTTGAAATTGAAAAAGGCAGACA
CCGAAATGTCCCAGCCAATCAGAGATTCTGTCCTACGTGTAAAGAAAATG
TCGAAGACGAATACCACTTTTTAATGGAATGTCCAACATATAAAGATGAA
AGAGTGAAGTTATTGCAGACAATCAAGTGTAAAACAAATGTAACATTACC
TCAGTCGAAAACAGAGACGTTCCGTGTACTTATGTCATGTCCTGAAACAA
TATCTATATATCTAGGCCAATATATTTTTACATCTATGCAAAAAAGAATC
CGTGAAATATCGATTTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000250 | genome | Sc0000250:339006..340806 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL81825_cuf0 |
| Biotype | protein_coding |
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