transcript:BL81649_cuf0 (mRNA) - B. lanceolatum

Overview
Nametranscript:BL81649_cuf0
Unique Nametranscript:BL81649_cuf0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



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Sequence
The following sequences are available for this feature:

protein sequence of transcript:BL81649_cuf0

>transcript:BL81649_cuf0-protein ID=transcript:BL81649_cuf0-protein|Name=transcript:BL81649_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=236bp
LRVLWRKGAIPESWKRAEGVFCPKQEKAEKVDQFRTISLLSVECKIFFAV
LAKRLLNYMLANKYIDTSIQKGGVPGFSGCLEHTSIITQLIQEAKAGKKD
LSVVWLDLENAYGSVPHQLIKMALEKYHVPQQAREIIFQYLDGLQIRFTV
NGSTTAWQRLQRGIITGCTISVILFVAAMNLVMKPAIGQSRGPRGKSGVR
QQPLKAFMDDLTLTTESVLSTRWMLRSLEKSATWAR
Run BLAST on NCBI

mRNA from alignment at Sc0000029:1016611..1017319-

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>transcript:BL81649_cuf0 ID=transcript:BL81649_cuf0|Name=transcript:BL81649_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=709bp|location=Sequence derived from alignment at Sc0000029:1016611..1017319- (Branchiostoma lanceolatum)
CCTCAGAGTATTATGGAGGAAAGGAGCGATACCAGAATCCTGGAAGAGAG
CAGAGGGTGTGTTTTGCCCCAAGCAGGAGAAAGCAGAGAAAGTAGACCAG
TTTAGGACAATATCGCTACTGTCAGTGGAGTGCAAGATATTCTTTGCAGT
CTTGGCCAAGAGGCTCTTGAACTACATGTTGGCGAACAAGTACATTGATA
CATCAATACAAAAAGGAGGTGTACCAGGTTTCTCAGGATGCCTCGAACAC
ACAAGTATTATAACCCAACTCATACAGGAGGCAAAAGCAGGAAAGAAAGA
CCTTTCAGTGGTCTGGCTGGACCTTGAAAATGCATATGGCTCAGTACCTC
ACCAGTTGATAAAGATGGCTCTAGAGAAATACCATGTACCACAGCAAGCA
CGGGAAATCATATTCCAGTATCTTGATGGTTTACAAATCAGATTCACAGT
CAATGGAAGTACAACAGCCTGGCAAAGACTGCAGAGAGGGATAATAACAG
GATGCACAATCTCAGTAATACTATTTGTTGCAGCAATGAACCTAGTGATG
AAGCCAGCCATAGGGCAGAGCAGAGGGCCAAGAGGAAAATCAGGAGTGAG
GCAACAACCGCTGAAAGCCTTTATGGATGACCTGACATTAACAACTGAGA
GTGTGCTAAGTACCAGATGGATGCTGAGGAGTCTAGAGAAGTCAGCCACT
TGGGCAAGG

Coding sequence (CDS) from alignment at Sc0000029:1016611..1017319-

>transcript:BL81649_cuf0 ID=transcript:BL81649_cuf0|Name=transcript:BL81649_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=708bp|location=Sequence derived from alignment at Sc0000029:1016611..1017319- (Branchiostoma lanceolatum)
CTCAGAGTATTATGGAGGAAAGGAGCGATACCAGAATCCTGGAAGAGAGC
AGAGGGTGTGTTTTGCCCCAAGCAGGAGAAAGCAGAGAAAGTAGACCAGT
TTAGGACAATATCGCTACTGTCAGTGGAGTGCAAGATATTCTTTGCAGTC
TTGGCCAAGAGGCTCTTGAACTACATGTTGGCGAACAAGTACATTGATAC
ATCAATACAAAAAGGAGGTGTACCAGGTTTCTCAGGATGCCTCGAACACA
CAAGTATTATAACCCAACTCATACAGGAGGCAAAAGCAGGAAAGAAAGAC
CTTTCAGTGGTCTGGCTGGACCTTGAAAATGCATATGGCTCAGTACCTCA
CCAGTTGATAAAGATGGCTCTAGAGAAATACCATGTACCACAGCAAGCAC
GGGAAATCATATTCCAGTATCTTGATGGTTTACAAATCAGATTCACAGTC
AATGGAAGTACAACAGCCTGGCAAAGACTGCAGAGAGGGATAATAACAGG
ATGCACAATCTCAGTAATACTATTTGTTGCAGCAATGAACCTAGTGATGA
AGCCAGCCATAGGGCAGAGCAGAGGGCCAAGAGGAAAATCAGGAGTGAGG
CAACAACCGCTGAAAGCCTTTATGGATGACCTGACATTAACAACTGAGAG
TGTGCTAAGTACCAGATGGATGCTGAGGAGTCTAGAGAAGTCAGCCACTT
GGGCAAGG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
gene:BL81649gene:BL81649Branchiostoma lanceolatumgene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BL81649_cuf0-E1BL81649_cuf0-E1-1564476830-173216Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
transcript:BL81649_cuf0transcript:BL81649_cuf0-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000029genomeSc0000029:1016611..1017319 -
Properties
Property NameValue
Transcript idBL81649_cuf0
Biotypeprotein_coding