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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL81542_cuf0 >transcript:BL81542_cuf0-protein ID=transcript:BL81542_cuf0-protein|Name=transcript:BL81542_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=170bp
QHIEVTLCSCEPPSCTLLRYGLWASTVSDPQTAISTSLLEWLVMSTLEAQ
VSVEAFCRIVRYQSHLSYSEGKTLYKALIGQPISEFRHLQYRLRTMKDLC
PSLDNGTACPACSKAEGTQIISLDGNFGLVRKKSSGTSSAPPLHGTSVFL
DDDVVQAFMATYGDASKPDE Run BLAST on NCBI mRNA from alignment at Sc0000656:67488..68723+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL81542_cuf0 ID=transcript:BL81542_cuf0|Name=transcript:BL81542_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=1236bp|location=Sequence derived from alignment at Sc0000656:67488..68723+ (Branchiostoma lanceolatum)
TCCAGCACATTGAAGTGACCCTCTGCAGCTGTGAACCACCCAGCTGCACA
CTCCTTCGATATGGACTGTGGGCATCGACTGTCTCAGACCCACAGACTGC
AATTTCTACGTCGCTACTCGAGTGGCTAGTCATGTCGACCCTGGAGGCCC
AGGTGTCGGTGGAAGCATTCTGCCGGATTGTCCGGTATCAAAGTCATCTA
TCCTACAGTGAGGTGAGTAATGATGCCTAGCTGAGTACAAATTTATACTA
TGAATTAGGTACAGTAGCAATAGTGACACAGTCTAACTTTAATGCATCGT
ATGTATCATTGTTTTAATTTCATAGACTCTTTGATTAATACAGGATGTCA
GATCAGAAATACAGCATAAAACTAGTATATCAGTTGTAATGTATTGTCAC
TGGTTAAAAAAAAAGAATGAGTCCTTGAAGTGAATTGACAAATCCCAGGA
TATGTTGTGGATCCATCCTGATCTGCTTGTCATTTGCACAGAAAGTGTGA
GATTGGCTTGTCTAAACTCCAATCACACTTGTCTCAGATTTGTGAAATTC
TTTATTTTACAGGGCAAAACACTGTACAAGGCACTCATCGGACAACCCAT
TTCGGAGTTCCGACATCTCCAGTACAGGCTGAGGACAATGAAAGACCTTT
GTCCATCACTGGACAATGGAACCGCTTGCCCTGCATGTTCCAAGGTATAT
GGTTTTTCTCATTTGGCCACAGCAAGTAAATCGTATGGAAGACATCAGCA
CGCTCATCAAATTTCGCCCTTCCAAGATTGTCAACATGGCAAGAATAAGT
ACCAAAATGGGAAAATCTGTAGTGTTATAGCCTTGATTGTACTTGTAGAA
GTGACACAAGTGAGGTAGCCATGACTGAAGTAGAGGTGAAACTTAATCAC
TGCAGTGAGTGGTAGGCCTGGAGAATAAGAAATTGTTACAAACATATTCA
TTGTCAAGGAATTAAGAACAAGAAGTCGGCTTAATCAACATAGTTATAAT
TTTGCTAATGTTGCATAAAACTCATAATATACATGAAATTGACATTCTCT
CCCTTTCTCCCTTCAGGCTGAGGGTACCCAAATTATTTCATTAGATGGGA
ACTTTGGTCTTGTTAGAAAGAAGTCATCTGGGACCAGTTCTGCACCACCC
CTGCATGGGACCTCTGTCTTCCTTGATGATGATGTTGTCCAGGCCTTCAT
GGCAACATACGGTGATGCAAGTAAACCAGACGAGGT Coding sequence (CDS) from alignment at Sc0000656:67488..68723+ >transcript:BL81542_cuf0 ID=transcript:BL81542_cuf0|Name=transcript:BL81542_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=1530bp|location=Sequence derived from alignment at Sc0000656:67488..68723+ (Branchiostoma lanceolatum)
CAGCACATTGAAGTGACCCTCTGCAGCTGTGAACCACCCAGCTGCACACT
CCTTCGATATGGACTGTGGGCATCGACTGTCTCAGACCCACAGACTGCAA
TTTCTACGTCGCTACTCGAGTGGCTAGTCATGTCGACCCTGGAGGCCCAG
GTGTCGGTGGAAGCATTCTGCCGGATTGTCCGGTATCAAAGTCATCTATC
CTACAGTGAGGGCAAAACACTGTACAAGGCACTCATCGGACAACCCATTT
CGGAGTTCCGACATCTCCAGTACAGGCTGAGGACAATGAAAGACCTTTGT
CCATCACTGGACAATGGAACCGCTTGCCCTGCATGTTCCAAGGCTGAGGG
TACCCAAATTATTTCATTAGATGGGAACTTTGGTCTTGTTAGAAAGAAGT
CATCTGGGACCAGTTCTGCACCACCCCTGCATGGGACCTCTGTCTTCCTT
GATGATGATGTTGTCCAGGCCTTCATGGCAACATACGGTGATGCAAGTAA
ACCAGACGAGCAGCACATTGAAGTGACCCTCTGCAGCTGTGAACCACCCA
GCTGCACACTCCTTCGATATGGACTGTGGGCATCGACTGTCTCAGACCCA
CAGACTGCAATTTCTACGTCGCTACTCGAGTGGCTAGTCATGTCGACCCT
GGAGGCCCAGGTGTCGGTGGAAGCATTCTGCCGGATTGTCCGGTATCAAA
GTCATCTATCCTACAGTGAGGGCAAAACACTGTACAAGGCACTCATCGGA
CAACCCATTTCGGAGTTCCGACATCTCCAGTACAGGCTGAGGACAATGAA
AGACCTTTGTCCATCACTGGACAATGGAACCGCTTGCCCTGCATGTTCCA
AGGCTGAGGGTACCCAAATTATTTCATTAGATGGGAACTTTGGTCTTGTT
AGAAAGAAGTCATCTGGGACCAGTTCTGCACCACCCCTGCATGGGACCTC
TGTCTTCCTTGATGATGATGTTGTCCAGGCCTTCATGGCAACATACGGTG
ATGCAAGTAAACCAGACGAGCAGCACATTGAAGTGACCCTCTGCAGCTGT
GAACCACCCAGCTGCACACTCCTTCGATATGGACTGTGGGCATCGACTGT
CTCAGACCCACAGACTGCAATTTCTACGTCGCTACTCGAGTGGCTAGTCA
TGTCGACCCTGGAGGCCCAGGTGTCGGTGGAAGCATTCTGCCGGATTGTC
CGGTATCAAAGTCATCTATCCTACAGTGAGGGCAAAACACTGTACAAGGC
ACTCATCGGACAACCCATTTCGGAGTTCCGACATCTCCAGTACAGGCTGA
GGACAATGAAAGACCTTTGTCCATCACTGGACAATGGAACCGCTTGCCCT
GCATGTTCCAAGGCTGAGGGTACCCAAATTATTTCATTAGATGGGAACTT
TGGTCTTGTTAGAAAGAAGTCATCTGGGACCAGTTCTGCACCACCCCTGC
ATGGGACCTCTGTCTTCCTTGATGATGATGTTGTCCAGGCCTTCATGGCA
ACATACGGTGATGCAAGTAAACCAGACGAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000656 | genome | Sc0000656:67488..68723 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL81542_cuf0 |
| Biotype | protein_coding |
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