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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL77315_cuf0 >transcript:BL77315_cuf0-protein ID=transcript:BL77315_cuf0-protein|Name=transcript:BL77315_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=214bp
MLSKENHKNLPALPEKKLVNQRTTEINTQKKPNSIRNTSITXIRKKNQLY
TKYVLNPTPVNHSVYKKYRNKLNHLLRTTKKEYYHRKFTDATSNIKKIWK
LINEELNRDKGPQKIQIGNETTQNKNEICDKFNDFFVDIGPSLESKIPKA
PKDPLSYITLQVDSTLSNFVPPTNAEISDIVKSLKDSAAGHDEISAKVLK
LSLPYIIDPLTHIL Run BLAST on NCBI mRNA from alignment at xfSc0001104:1119..2422- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL77315_cuf0 ID=transcript:BL77315_cuf0|Name=transcript:BL77315_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=1304bp|location=Sequence derived from alignment at xfSc0001104:1119..2422- (Branchiostoma lanceolatum)
CTGTAGCTGGTAGAAACGCTTCTAATCGCTTATATGAGATGGTCTCTTTA
ATATACTCATGGAAATCAGATCACGTTAATTAAAGCCATTTTGTTCCGCT
TTCTACCAGTAGAACATAATTTTACGTCAGTAATTTACAGACAATTATCA
CCTAGAACGCACGAAGGGCCGTATGTAATTACCATCCTTTTGTCATCCAT
TTTCCACTACACGTCAAGTATAAGGATTCCGTACATTCCCATGCACTTTC
CAAGTCCAGGTGTGTAAGAAAAAATCTAGGACCGGACACGGCGATCCCTG
AAATCCATGGACACAACCATTACACGGTGAATTTGACGGGTGTGTAAGGG
CCCTGATACTCCCTGAAATTCGACTTTCCGAGCAGTGTTCACAACATTTA
TACCAACTCTCTAAGTACAGACTATAAAGTAGGCATCCTTATTACTGATA
TATCAAACCATTTTCCGCTATTTCTTATATCTGATGTGGAGGCGCCAACT
AAGGAAACTGAAAATATATATTACCGACAAATTAACACAAAGAATACCCA
GAAGTTCACAGAATCCCTATCAGGAGCAGTTTGGAATGACATACCAAACG
AAACTGACACAGAGAAAGTTTACAACCGTTTTCTTGCAAAATATGGATCT
ATATACGATAAATGCTTTCCAAAGAAAATCACAAAAATCTACCAGCACTG
CCTGAAAAAAAATTGGTTAACCAGCGGACTACTGAAATCAATACGCAAAA
AAAACCCAACTCTATACGAAATACGTCAATAACCNCAATACGCAAAAAAA
ACCAACTCTATACGAAATACGTCCTTAACCCCACACCTGTCAACCACAGT
GTGTACAAAAAGTACCGAAATAAGCTTAATCACCTTCTGAGAACTACGAA
AAAAGAATACTACCACAGAAAGTTCACTGATGCTACTAGTAATATCAAGA
AAATATGGAAACTGATTAATGAAGAACTAAATCGTGACAAAGGCCCCCAA
AAGATTCAAATTGGTAATGAAACTACCCAAAATAAAAATGAAATCTGTGA
TAAATTTAATGATTTCTTTGTTGATATTGGGCCTTCTCTAGAAAGTAAGA
TTCCAAAAGCTCCAAAAGACCCTTTGAGCTATATCACATTACAAGTAGAC
TCTACCTTATCGAACTTTGTACCACCAACCAATGCCGAAATTTCAGACAT
TGTCAAAAGCTTAAAGGATTCAGCCGCTGGCCATGATGAAATAAGTGCGA
AAGTCCTGAAGTTATCTTTGCCCTATATTATTGACCCTCTCACACATATT
CTTT Coding sequence (CDS) from alignment at xfSc0001104:1119..2422- >transcript:BL77315_cuf0 ID=transcript:BL77315_cuf0|Name=transcript:BL77315_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=642bp|location=Sequence derived from alignment at xfSc0001104:1119..2422- (Branchiostoma lanceolatum)
ATGCTTTCCAAAGAAAATCACAAAAATCTACCAGCACTGCCTGAAAAAAA
ATTGGTTAACCAGCGGACTACTGAAATCAATACGCAAAAAAAACCCAACT
CTATACGAAATACGTCAATAACCNCAATACGCAAAAAAAACCAACTCTAT
ACGAAATACGTCCTTAACCCCACACCTGTCAACCACAGTGTGTACAAAAA
GTACCGAAATAAGCTTAATCACCTTCTGAGAACTACGAAAAAAGAATACT
ACCACAGAAAGTTCACTGATGCTACTAGTAATATCAAGAAAATATGGAAA
CTGATTAATGAAGAACTAAATCGTGACAAAGGCCCCCAAAAGATTCAAAT
TGGTAATGAAACTACCCAAAATAAAAATGAAATCTGTGATAAATTTAATG
ATTTCTTTGTTGATATTGGGCCTTCTCTAGAAAGTAAGATTCCAAAAGCT
CCAAAAGACCCTTTGAGCTATATCACATTACAAGTAGACTCTACCTTATC
GAACTTTGTACCACCAACCAATGCCGAAATTTCAGACATTGTCAAAAGCT
TAAAGGATTCAGCCGCTGGCCATGATGAAATAAGTGCGAAAGTCCTGAAG
TTATCTTTGCCCTATATTATTGACCCTCTCACACATATTCTT
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| xfSc0001104 | genome | xfSc0001104:1119..2422 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL77315_cuf0 |
| Biotype | protein_coding |
|
