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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL77283_cuf0 >transcript:BL77283_cuf0-protein ID=transcript:BL77283_cuf0-protein|Name=transcript:BL77283_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=143bp
MSCSKSLKATDLHSSWKVEFDWKDFPEELVQGCCAIASVLCVPTVAVLYS
LITVAAFAVSHAQVSPPDTKWRENVLLWTAICLPTGAGKSTICKWIQELV
TDVYTKLRKDHTDSGSPSAGCTEMWSAEEMTFPKLGEVMCLNG Run BLAST on NCBI mRNA from alignment at Sc0000205:100744..102002+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL77283_cuf0 ID=transcript:BL77283_cuf0|Name=transcript:BL77283_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=1259bp|location=Sequence derived from alignment at Sc0000205:100744..102002+ (Branchiostoma lanceolatum)
ATACCCAGGTCGCGTATTCCTAGGAAGATGTCGCCTAGCATGACTTTGGC
AATACATATACTACACTACGCGTCTACAAGTTTTCTGTGTTACGTTCAAA
TGTCTCAACTGTCATTTCTAGAACCTTTCTTCTAATGTTCTTATCATCTT
AGACGTCACCAACTGACGTTTACGTCACTAACTCAGGTGTGTTCGTAATT
CGAAACCGGAATGCGTTCTTAGAACGGTGTCGTTTTTCAGTCTATCAGTT
TGAAACCGTGTTGCGCTGAAGTCGCCACGGCTAATTTTTAGTCCGTGTCT
TTGACGAAATAGACTTTCTTTACGGGAGAATTACGGACAATATCATATCA
TGTCGTGCAGTAAATCTTTGAAGGCTACAGATCTACATTCGTCCTGGAAA
GTCGAGTTCGACTGGAAGGATTTTCCGGAAGAACTTGTTCAGGTGGGTTA
GTCGTATTTATTGCATCTCAATATCTTTTGCGTTCTGACTTTTGATTTAT
AAATCTTATTTCTTTAGTAATTACATCTTACCCAAACAACAGAATGTTGA
TTACGTATCTTTAGTAATAATTTTTATTATTGCTTACAGGGATGCTGTGC
TATTGCATCTGTTTTGTGCGTGCCAACGGTTGCTGTTTTATACAGCCTTA
TCACAGTCGCGGCTTTTGCTGTAAGCCATGCACAAGTCTCTCCACCTGAC
ACCAAATGGAGGGAAAATGTTCTTCTGTGGACAGCCATCTGTCTGCCAAC
AGGTAGATTTACTTCTAAACATCTTTTTTATTGTGTCAAATCAAACGTTT
TATTCAATGTAGATATGACGTTATATGTTCAAAATTGACAACCGTCATTT
CTAGAACCATACCTTGTCGAACATTCTTTTGCTTAACGTCACCAACAGAC
ATTTACGTCATTTCCTCAGGTGTTTTTTGAAATTCGAACCCGGAATGCGT
TCGTAGAATGGTGTCGTTTTTCAATCTCAGTTTGAAATAGTATTGCGCCA
CGGCTACTTTTATTTCATCTGTTCTAATCTTTCTAAACATCTATTAGTGG
GCATCAAAATGACATTTACCTGTTGTCTTGGCAGGCGCTGGGAAATCTAC
TATCTGTAAATGGATTCAAGAACTTGTGACTGATGTTTACACGAAGTTGC
GGAAAGACCATACGGACAGTGGTAGTCCGTCTGCGGGGTGTACAGAAATG
TGGAGCGCGGAAGAGATGACGTTCCCGAAGCTGGGGGAAGTCATGTGTTT
AAACGGGAA Coding sequence (CDS) from alignment at Sc0000205:100744..102002+ >transcript:BL77283_cuf0 ID=transcript:BL77283_cuf0|Name=transcript:BL77283_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=1287bp|location=Sequence derived from alignment at Sc0000205:100744..102002+ (Branchiostoma lanceolatum)
ATGTCGTGCAGTAAATCTTTGAAGGCTACAGATCTACATTCGTCCTGGAA
AGTCGAGTTCGACTGGAAGGATTTTCCGGAAGAACTTGTTCAGGGATGCT
GTGCTATTGCATCTGTTTTGTGCGTGCCAACGGTTGCTGTTTTATACAGC
CTTATCACAGTCGCGGCTTTTGCTGTAAGCCATGCACAAGTCTCTCCACC
TGACACCAAATGGAGGGAAAATGTTCTTCTGTGGACAGCCATCTGTCTGC
CAACAGGCGCTGGGAAATCTACTATCTGTAAATGGATTCAAGAACTTGTG
ACTGATGTTTACACGAAGTTGCGGAAAGACCATACGGACAGTGGTAGTCC
GTCTGCGGGGTGTACAGAAATGTGGAGCGCGGAAGAGATGACGTTCCCGA
AGCTGGGGGAAGTCATGTGTTTAAACGGGATGTCGTGCAGTAAATCTTTG
AAGGCTACAGATCTACATTCGTCCTGGAAAGTCGAGTTCGACTGGAAGGA
TTTTCCGGAAGAACTTGTTCAGGGATGCTGTGCTATTGCATCTGTTTTGT
GCGTGCCAACGGTTGCTGTTTTATACAGCCTTATCACAGTCGCGGCTTTT
GCTGTAAGCCATGCACAAGTCTCTCCACCTGACACCAAATGGAGGGAAAA
TGTTCTTCTGTGGACAGCCATCTGTCTGCCAACAGGCGCTGGGAAATCTA
CTATCTGTAAATGGATTCAAGAACTTGTGACTGATGTTTACACGAAGTTG
CGGAAAGACCATACGGACAGTGGTAGTCCGTCTGCGGGGTGTACAGAAAT
GTGGAGCGCGGAAGAGATGACGTTCCCGAAGCTGGGGGAAGTCATGTGTT
TAAACGGGATGTCGTGCAGTAAATCTTTGAAGGCTACAGATCTACATTCG
TCCTGGAAAGTCGAGTTCGACTGGAAGGATTTTCCGGAAGAACTTGTTCA
GGGATGCTGTGCTATTGCATCTGTTTTGTGCGTGCCAACGGTTGCTGTTT
TATACAGCCTTATCACAGTCGCGGCTTTTGCTGTAAGCCATGCACAAGTC
TCTCCACCTGACACCAAATGGAGGGAAAATGTTCTTCTGTGGACAGCCAT
CTGTCTGCCAACAGGCGCTGGGAAATCTACTATCTGTAAATGGATTCAAG
AACTTGTGACTGATGTTTACACGAAGTTGCGGAAAGACCATACGGACAGT
GGTAGTCCGTCTGCGGGGTGTACAGAAATGTGGAGCGCGGAAGAGATGAC
GTTCCCGAAGCTGGGGGAAGTCATGTGTTTAAACGGG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000205 | genome | Sc0000205:100744..102002 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL77283_cuf0 |
| Biotype | protein_coding |
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