transcript:BL76854_cuf0 (mRNA) - B. lanceolatum

Overview
Nametranscript:BL76854_cuf0
Unique Nametranscript:BL76854_cuf0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



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Sequence
The following sequences are available for this feature:

protein sequence of transcript:BL76854_cuf0

>transcript:BL76854_cuf0-protein ID=transcript:BL76854_cuf0-protein|Name=transcript:BL76854_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=99bp
VYVCVHMCVCVCACVCVFVCACLCVYVYVCMCVSVRVCMCVCACVCVCVC
MYAQVYSVSRLLNSTALSMCSYKKVNCIFYKNHSLRGHHYIPYLLAIDS
Run BLAST on NCBI

mRNA from alignment at Sc0000006:3844136..3844924-

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>transcript:BL76854_cuf0 ID=transcript:BL76854_cuf0|Name=transcript:BL76854_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=789bp|location=Sequence derived from alignment at Sc0000006:3844136..3844924- (Branchiostoma lanceolatum)
GTGTGTATGTGTGTGTGCATATGTGTGTATGTGTGTGTGCATGTGTATGT
GTATTTGTGTGTGCGTGTTTATGTGTGTATGTGTATGTATGTATGTGTGT
GTCTGTGCGTGTGTGCATGTGTGTGTGTGCGTGTGTGTGTGTGTGTGTGT
GTATGTATGCACAGGTCTATAGTGTGTCAAGACTACTGAATTCTACTGCA
TTGTCCATGTGTTCATATAAGAAAGTTAACTGCATCTTTTACAAAAATCA
TAGTTTGCGTGGACATCATTACATACCTTACTTATTGGCAATTGACTCTT
AACGAGTATTCATAAAGATTTGGCTATTGTAATTCTAGAATATAAAATCT
TCTTGTCTGTGTTGAACTTTGTCCACTGAATCGTTTGCTTTCTTTCAACT
TAAGATTGTATGAATGAATGACGTAAGGCATGATATACATAATCACCTTT
AGAGCTGCATGTACATATGGAGATATTGTGATACTTTGTGCCTATACAAA
CGTTTTCTCTACAGCCAGGAATGCTATGTACATAGGCTTTTTATGTCTCT
CAGTGAGTAATCACGTGAGTTCTGTGGAATAAATATGTTGTAAGATTTCT
TGATCTCGTTGTTATCTCTTTCCTTTCGAAATAAGGGAAAGAACGGTTCT
TGTAAAACTAGGGACGTGCTGATTTGATTATATGGATGACATCATCTGGG
AACCCCAAAACTGGTGCGAGCTTACAAAGAAAAAAAGCCTTCATTATGAA
ATTTAAGTGGTTAGGAAGGCTGAACAAATGACTAAAGAC

Coding sequence (CDS) from alignment at Sc0000006:3844136..3844924-

>transcript:BL76854_cuf0 ID=transcript:BL76854_cuf0|Name=transcript:BL76854_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=300bp|location=Sequence derived from alignment at Sc0000006:3844136..3844924- (Branchiostoma lanceolatum)
GTGTATGTGTGTGTGCATATGTGTGTATGTGTGTGTGCATGTGTATGTGT
ATTTGTGTGTGCGTGTTTATGTGTGTATGTGTATGTATGTATGTGTGTGT
CTGTGCGTGTGTGCATGTGTGTGTGTGCGTGTGTGTGTGTGTGTGTGTGT
ATGTATGCACAGGTCTATAGTGTGTCAAGACTACTGAATTCTACTGCATT
GTCCATGTGTTCATATAAGAAAGTTAACTGCATCTTTTACAAAAATCATA
GTTTGCGTGGACATCATTACATACCTTACTTATTGGCAATTGACTCTTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
gene:BL76854gene:BL76854Branchiostoma lanceolatumgene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BL76854_cuf0-E1BL76854_cuf0-E1-1564476830-69745Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
transcript:BL76854_cuf0transcript:BL76854_cuf0-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000006genomeSc0000006:3844136..3844924 -
Properties
Property NameValue
Transcript idBL76854_cuf0
Biotypeprotein_coding