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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL76831_cuf0 >transcript:BL76831_cuf0-protein ID=transcript:BL76831_cuf0-protein|Name=transcript:BL76831_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=190bp
MEAVRVWLALSVLRVVWVLLPQSGYIHPDEFFQSSEVMAGRVLDYKVHLT
WEWSEDFPARSTIFPFLTSGIPFLVLKAFNYLGLLPDSIGAYALLVAPRL
WMTILSFFIDFCLYKICSSVKEKWTGVEIDAFKCMAVFSASYVTLVFFTR
TFSNILETVLFVVIIGLVIDYIKGGEPENRQKKNGSNEVD Run BLAST on NCBI mRNA from alignment at Sc0000036:1342412..1345189+ Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL76831_cuf0 ID=transcript:BL76831_cuf0|Name=transcript:BL76831_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=2778bp|location=Sequence derived from alignment at Sc0000036:1342412..1345189+ (Branchiostoma lanceolatum)
GTTTCACTTTCGCTGATTTCATTCCAGTCAAACCGCAATTTTAGGACCTT
TTGTACACATTTTTCTGACAAATTATGTGTTTGATGCACAGTTAACAAAT
CAGACATTGCTATTGACATGAAATTTTCTTATCTTGGCTTCGTAAAGGTA
AGATTTCGACGCCCATTCAAATATTTGTCTCGATCTCAGACAAATATTAT
TATTTTGGCGGGAGGGGAGGGGGGTGAGTTGTCAATACATCATGTTAGCA
TGATTAGACAAAAAATATTCACTAACAAAAATAAAAACAGGATTGAATAT
TGCTGTATCTACTGAGTAAAATGCTTCTTACAGAACGATAAATTGTCCCA
TTATGGGACCGCTGTCGAGATACATGTACTAGTAGTAGTGTATAAAATGT
TCAGGTCTTCAGTCACGTGTTATGATTTATATTCTACTAACGTGGGGTCC
CATAACTTTGACAGTACCAAAACTTCGAACGATTTTTACTTTGTCTTATC
ATGCAGAAGAGAGACATATTTGTTTCTATCCACTGTGCTGAATAAAAACG
CTGAGAACCCAAGTTCATGCATAAAGCTGTCGTCTGAATGAAACATTGAT
TTGTGTACAGTTAACTGATTTTTGCGCCACCAAGAAAATTTGGCAATAAA
CAATGGCTACGTTGGATGCATGGTCATTGCGTAATGGCAATCTTACATAA
AGAACAGTCAACAATCGTCACGCAAACTTTCTTGTTTTACACGAGGCATA
AAGCTATACAAAAAACACAAAAAACGTACGTGTTCGTTAGTTTATGTCAC
GATTAAACTTGTCTTAAATAACGAAATAACCGCGGCTTCGAACGCCCTCC
CCCTTTACAACACGGCCATTCCGTTGACCACGATTTGAATGTGATGCTAC
AGTGTTGACATTTCACGGTAGTACATGGACTACAAAGTATGAACACTTGA
TGATTGCAATCTATGACATCACATGAATTGTGATGAACATCATTCTAAAT
TATAGGTCTATTTGAAGTACAGTATTTCTCCACCCTGAATCATATATACA
TTGTCATCACTACAGACAGGAAGATCTACAATCCAGACCTGAAGCCATTT
TAAGAAAATTGTACAATGGAGGCAGTGAGAGTGTGGCTGGCTCTATCAGT
GCTGCGTGTGGTCTGGGTTCTCCTGCCTCAGTCTGGGTACATCCACCCTG
ATGAGTTCTTCCAGTCATCGGAGGTCATGGCAGGTTAGAACTTCATCATT
TTAAATATGATGATAATATAATTATCATCATATTTAAAAAGTTACAAAAT
TCAAAAGGGTGCAGCTATATATTGTAACATCTAGGATAGCTCATCATAGC
CTAGGTACCATCCTCTGTAGTAACCACTGGCTCAATCTTTTCCGCGGTTA
GGCGAGCAAAACGACTGAGCCAGCAGCTACTACGGAGGATGGTACGTACC
CAGGCTAAGCTCATCAACTTCTAATGCTAAGGTCACAATTCCCGCCCGGG
GCCCGACCTGGCAGTTGGTGGGAGCGAAAAGTATGATATAAAAATAAAAA
AAACCAAAGAGTTGCAAAAATTCGTCATGAGCACCATTTGTGTATACTCC
TGGTATGAATTGTTCAATTTTCGTTAACGCAAACAACCTGGCCGGGGCCT
GGTTTGAAAATGTGTCCTTAGCATAAGCTGGTATGTTGATATGCTAAAGG
GTACACACATGTAGTTAGACCAGGTATACAGATACTGATACTATTGTTTT
TATGGTGCAATAGTGACTATCTGTCGTATGATGCACGTATACCAGCTGGT
GGAAACTATACTACTAGTACTTACCGTGCATTTGTGTAACATTTCAGACA
AATGTTATTCCTGTTATGATCTACGGGCAAATACTTGTGGACAGCCTCAA
GCTGACCGTACACACTCATGCCATATCTTCAGAAAAGACACTGTAGCCAC
ATATTTCCAGTTAAGAACTTTATTGGAGCCCACACTGACTAGTTTTGCCT
TGTGTGTGGCTTTTTCAAGGATCAGAGCTCGAATGAGCACAAGTACATTA
ATTTTGTGTTCTGGCTTTTATAGGCCAAAGTGCCCTAGGTGGCTTAACTA
TAAAAAGGCTTTTCAGTATATGTACTAGTATGTATATTTTGTACGCCTTG
GTGCCGTATTTACTGGTCTACAATCTCTCTGACACTAGTTGGTTGCATTG
ACGACTTAGTAAGCGACTCTGAGCATAAATTAACCGGTAGGATACCCAAG
ACTACATGTTGCTTTGTAAAAAGCTTCAGTACCTTTGATCAACTAAGATC
TTATATCGTTATCTGTTTTTACAGGAAGAGTGTTGGACTACAAGGTGCAC
CTGACATGGGAGTGGAGCGAAGACTTCCCGGCACGATCGACCATTTTTCC
TTTCCTCACCTCAGGAATACCTTTCCTTGTGCTGAAGGCCTTTAACTATC
TAGGGCTTCTCCCAGATTCTATTGGAGCATATGCACTACTGGTTGCACCA
AGGCTGTGGATGACAATTCTTTCGTTCTTCATAGACTTTTGTCTTTATAA
GATCTGTAGCAGTGTGAAGGAAAAGTGGACTGGTGTGGAGATTGATGCAT
TTAAGTGTATGGCAGTGTTTTCAGCCTCTTATGTTACTCTCGTTTTCTTC
ACCAGAACATTCTCCAACATTCTCGAAACTGTGCTTTTCGTAGTCATTAT
TGGACTTGTCATCGATTACATCAAGGGTGGCGAACCTGAAAATAGGCAAA
AGAAGAATGGATCCAATGAAGTTGACGA Coding sequence (CDS) from alignment at Sc0000036:1342412..1345189+ >transcript:BL76831_cuf0 ID=transcript:BL76831_cuf0|Name=transcript:BL76831_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=1140bp|location=Sequence derived from alignment at Sc0000036:1342412..1345189+ (Branchiostoma lanceolatum)
ATGGAGGCAGTGAGAGTGTGGCTGGCTCTATCAGTGCTGCGTGTGGTCTG
GGTTCTCCTGCCTCAGTCTGGGTACATCCACCCTGATGAGTTCTTCCAGT
CATCGGAGGTCATGGCAGGAAGAGTGTTGGACTACAAGGTGCACCTGACA
TGGGAGTGGAGCGAAGACTTCCCGGCACGATCGACCATTTTTCCTTTCCT
CACCTCAGGAATACCTTTCCTTGTGCTGAAGGCCTTTAACTATCTAGGGC
TTCTCCCAGATTCTATTGGAGCATATGCACTACTGGTTGCACCAAGGCTG
TGGATGACAATTCTTTCGTTCTTCATAGACTTTTGTCTTTATAAGATCTG
TAGCAGTGTGAAGGAAAAGTGGACTGGTGTGGAGATTGATGCATTTAAGT
GTATGGCAGTGTTTTCAGCCTCTTATGTTACTCTCGTTTTCTTCACCAGA
ACATTCTCCAACATTCTCGAAACTGTGCTTTTCGTAGTCATTATTGGACT
TGTCATCGATTACATCAAGGGTGGCGAACCTGAAAATAGGCAAAAGAAGA
ATGGATCCAATGAAGTTGACATGGAGGCAGTGAGAGTGTGGCTGGCTCTA
TCAGTGCTGCGTGTGGTCTGGGTTCTCCTGCCTCAGTCTGGGTACATCCA
CCCTGATGAGTTCTTCCAGTCATCGGAGGTCATGGCAGGAAGAGTGTTGG
ACTACAAGGTGCACCTGACATGGGAGTGGAGCGAAGACTTCCCGGCACGA
TCGACCATTTTTCCTTTCCTCACCTCAGGAATACCTTTCCTTGTGCTGAA
GGCCTTTAACTATCTAGGGCTTCTCCCAGATTCTATTGGAGCATATGCAC
TACTGGTTGCACCAAGGCTGTGGATGACAATTCTTTCGTTCTTCATAGAC
TTTTGTCTTTATAAGATCTGTAGCAGTGTGAAGGAAAAGTGGACTGGTGT
GGAGATTGATGCATTTAAGTGTATGGCAGTGTTTTCAGCCTCTTATGTTA
CTCTCGTTTTCTTCACCAGAACATTCTCCAACATTCTCGAAACTGTGCTT
TTCGTAGTCATTATTGGACTTGTCATCGATTACATCAAGGGTGGCGAACC
TGAAAATAGGCAAAAGAAGAATGGATCCAATGAAGTTGAC
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000036 | genome | Sc0000036:1342412..1345189 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL76831_cuf0 |
| Biotype | protein_coding |
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