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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL76829_cuf0 >transcript:BL76829_cuf0-protein ID=transcript:BL76829_cuf0-protein|Name=transcript:BL76829_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=269bp
NSSSKKQMRQGKNELKTKGIHKKSCQELDMELFFLLCYFIPIFIMSLVAH
HEPRYISPCIVPLVLAYHSNFEWKAGKKLLFVGFVVGNVLGGVLFGVLHQ
GGVVRSLLHLHDLVHQQQSTTTMHIIYFHTYTPPGHLLGIHSNQRANQSI
DMVQMVTNDNKGPQVHLHALEGAPINVLFDKLRILYQQKQVSSNTHVTYI
VSPSTLHSTFYKHGTDMKIVIVLREVFFPHLSMEDPPKVQDIVQTQSEED
STLLERLRFTFGLNLYEVM Run BLAST on NCBI mRNA from alignment at Sc0000036:1345712..1347388+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL76829_cuf0 ID=transcript:BL76829_cuf0|Name=transcript:BL76829_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=1677bp|location=Sequence derived from alignment at Sc0000036:1345712..1347388+ (Branchiostoma lanceolatum)
CAATTCTAGCAGTAAGAAACAAATGAGACAGGGAAAAAATGAGTTAAAAA
CAAAAGGGATTCATAAGAAGTCTTGCCAAGAACTTGATATGGAGCTGTTC
TTCCTTCTGTGTTATTTCATTCCAATTTTTATCATGTCGTTGGTAGCACA
CCATGAACCAAGGTACATTTCTCCTTGCATTGTCCCGCTTGTGTTAGCAT
ACCACAGTAATTTTGAATGGAAAGCTGGCAAGAAGTTGCTTTTCGTAGGG
TTTGTAGTTGGCAATGTTCTGGGTGGCGTTTTGTTTGGTGTTCTGCATCA
GGGAGGGGTAGTGCGATCATTGCTGCACTTACATGATTTAGTGCACCAGC
AACAAAGTACAACTACAATGCACATCATCTACTTTCATACTTACACACCT
CCCGGACATCTGCTTGGAATCCATAGCAACCAAAGAGCCAATCAGAGCAT
AGACATGGTACAAATGGTGACCAATGACAACAAAGGACCCCAGGTTCATT
TGCATGCCTTAGAAGGTGCACCAATCAATGTCCTTTTTGATAAATTGAGA
ATTCTGTACCAACAGAAACAAGTTAGTAGCAATACTCATGTCACATACAT
AGTCTCTCCATCCACTTTGCATTCTACATTCTATAAGCATGGGACTGACA
TGAAGATAGTTATAGTTTTGCGAGAAGTTTTCTTCCCACATTTAAGTATG
GAGGACCCCCCTAAAGTGCAGGATATTGTACAGACTCAATCGGAAGAGGA
CAGTACATTGCTAGAGAGGCTAAGATTTACATTCGGACTAAACCTCTACG
AGGTTATGTGAACATTTCCAGATTAACTGTTGTATTACACATATTGGTGA
TGGTAAGATTCTGTATTATTGTCAAGTCAAAGTCGAAGCCTTAATTTTTC
TTATTGTATTCTGGTTATCAGGAATATCTGTACATTGTTGTACTGTACTT
AAATGGATTTATTCATGTTAGGATGTTAACAATGTAAGTGTATTGTAAGT
ATGTACATTGTAAGTGTGGTGGCTGGTTTGCCTATTATCCATGTTGCGCT
ATTGGTTCAAAGTGAGCTTAATATGATGTTTTGATTGACTGTCTTCATAT
ATACATGTACATGAGGTTAACAAGTTTAAGATTTATTTTTGTGACAAATG
TATGACTCTTGTTATCCTTTACAATAAATCGACAATTCTTAGCAAACTTA
TATGTTCTGTTGCAAGTATATTTTTTTATTGTGAACGTTTTTGGCCATTC
ACCCAAAATGGAAGTGTAAAGCATTTGTATCAGACGATGCACTTGCAAGT
TTATGATTTATGTTTGTGACCAATGTATGGCTCATGTTATCCTTTACAAT
AAATCAATAATTCTAAGCAAAGCTATATGTTCTGTTGCAAGCATATTTGT
ATTTCTTATGAAAGTTTTTGGCCATTCACCAAAAATGAAAATTGGAAGGC
CCTTGTTAACTTCTACCAAAAGGAATTTGCCAAATAAACAGATAACATGC
CAGAGGAATACTCCCTGGCCAGCTAACTCCTCTGGCATGTTATCTGTCTA
TTTGGCAAATTTCTACTATCTTTCCAGCGACATGTGGAGCCTGGTAGAGG
CTAGGCCCTTGTATCAGACGATGCACTTGCAAGTTTAAGATTTATTTTTT
GTTACTAATGTATGACACTTGTTGTGC Coding sequence (CDS) from alignment at Sc0000036:1345712..1347388+ >transcript:BL76829_cuf0 ID=transcript:BL76829_cuf0|Name=transcript:BL76829_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=810bp|location=Sequence derived from alignment at Sc0000036:1345712..1347388+ (Branchiostoma lanceolatum)
AATTCTAGCAGTAAGAAACAAATGAGACAGGGAAAAAATGAGTTAAAAAC
AAAAGGGATTCATAAGAAGTCTTGCCAAGAACTTGATATGGAGCTGTTCT
TCCTTCTGTGTTATTTCATTCCAATTTTTATCATGTCGTTGGTAGCACAC
CATGAACCAAGGTACATTTCTCCTTGCATTGTCCCGCTTGTGTTAGCATA
CCACAGTAATTTTGAATGGAAAGCTGGCAAGAAGTTGCTTTTCGTAGGGT
TTGTAGTTGGCAATGTTCTGGGTGGCGTTTTGTTTGGTGTTCTGCATCAG
GGAGGGGTAGTGCGATCATTGCTGCACTTACATGATTTAGTGCACCAGCA
ACAAAGTACAACTACAATGCACATCATCTACTTTCATACTTACACACCTC
CCGGACATCTGCTTGGAATCCATAGCAACCAAAGAGCCAATCAGAGCATA
GACATGGTACAAATGGTGACCAATGACAACAAAGGACCCCAGGTTCATTT
GCATGCCTTAGAAGGTGCACCAATCAATGTCCTTTTTGATAAATTGAGAA
TTCTGTACCAACAGAAACAAGTTAGTAGCAATACTCATGTCACATACATA
GTCTCTCCATCCACTTTGCATTCTACATTCTATAAGCATGGGACTGACAT
GAAGATAGTTATAGTTTTGCGAGAAGTTTTCTTCCCACATTTAAGTATGG
AGGACCCCCCTAAAGTGCAGGATATTGTACAGACTCAATCGGAAGAGGAC
AGTACATTGCTAGAGAGGCTAAGATTTACATTCGGACTAAACCTCTACGA
GGTTATGTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000036 | genome | Sc0000036:1345712..1347388 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL76829_cuf0 |
| Biotype | protein_coding |
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