transcript:BL76393_cuf0 (mRNA) - B. lanceolatum

Overview
Nametranscript:BL76393_cuf0
Unique Nametranscript:BL76393_cuf0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

protein sequence of transcript:BL76393_cuf0

>transcript:BL76393_cuf0-protein ID=transcript:BL76393_cuf0-protein|Name=transcript:BL76393_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=201bp
NGKLVSEKCIQESCREHEFSDLTPDSNYRISAVTKIDDVTSEPFEVGAKT
TVPCPKNLHVLEVGEDYIIVQWSAVSSDITGYDVHIKAVAHDDESFKHHC
DATGTTCKLTQLISGREYLISVLALSGNDRSQSRNTKQYTKVRPPVNVEV
NPGTDFIRIDWTPPDGDVKWYDLEIADTLGNRVLESIEGDIKPYTETVGK
L
Run BLAST on NCBI

mRNA from alignment at Sc0000106:736251..736855+

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>transcript:BL76393_cuf0 ID=transcript:BL76393_cuf0|Name=transcript:BL76393_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=605bp|location=Sequence derived from alignment at Sc0000106:736251..736855+ (Branchiostoma lanceolatum)
CAAATGGTAAACTTGTCTCTGAAAAATGTATACAGGAAAGCTGTCGTGAA CATGAATTCAGTGACCTAACACCTGATAGTAACTACAGAATTTCGGCTGT CACCAAGATCGATGATGTCACGAGCGAGCCATTCGAAGTAGGTGCGAAAA CTACGGTTCCGTGTCCTAAGAATCTACACGTGCTTGAAGTTGGAGAGGAC TACATCATCGTGCAATGGTCTGCAGTTAGCAGTGATATAACAGGTTATGA CGTACATATCAAGGCAGTGGCACATGACGATGAATCATTCAAACATCACT GTGATGCAACAGGCACGACTTGTAAACTCACCCAACTGATCTCAGGGCGG GAGTACCTCATATCAGTATTGGCTCTGAGTGGAAACGATAGAAGTCAGTC GCGAAATACCAAACAGTATACGAAAGTACGCCCTCCAGTCAATGTAGAAG TTAACCCGGGCACTGACTTCATTAGGATTGATTGGACGCCTCCCGATGGA GATGTTAAATGGTATGACCTTGAGATTGCCGACACATTAGGAAACCGTGT TCTAGAAAGCATAGAAGGTGACATCAAACCTTACACGGAGACTGTTGGTA AGCTG

Coding sequence (CDS) from alignment at Sc0000106:736251..736855+

>transcript:BL76393_cuf0 ID=transcript:BL76393_cuf0|Name=transcript:BL76393_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=603bp|location=Sequence derived from alignment at Sc0000106:736251..736855+ (Branchiostoma lanceolatum)
AATGGTAAACTTGTCTCTGAAAAATGTATACAGGAAAGCTGTCGTGAACA
TGAATTCAGTGACCTAACACCTGATAGTAACTACAGAATTTCGGCTGTCA
CCAAGATCGATGATGTCACGAGCGAGCCATTCGAAGTAGGTGCGAAAACT
ACGGTTCCGTGTCCTAAGAATCTACACGTGCTTGAAGTTGGAGAGGACTA
CATCATCGTGCAATGGTCTGCAGTTAGCAGTGATATAACAGGTTATGACG
TACATATCAAGGCAGTGGCACATGACGATGAATCATTCAAACATCACTGT
GATGCAACAGGCACGACTTGTAAACTCACCCAACTGATCTCAGGGCGGGA
GTACCTCATATCAGTATTGGCTCTGAGTGGAAACGATAGAAGTCAGTCGC
GAAATACCAAACAGTATACGAAAGTACGCCCTCCAGTCAATGTAGAAGTT
AACCCGGGCACTGACTTCATTAGGATTGATTGGACGCCTCCCGATGGAGA
TGTTAAATGGTATGACCTTGAGATTGCCGACACATTAGGAAACCGTGTTC
TAGAAAGCATAGAAGGTGACATCAAACCTTACACGGAGACTGTTGGTAAG
CTG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
gene:BL76393gene:BL76393Branchiostoma lanceolatumgene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BL76393_cuf0-E1BL76393_cuf0-E1-1564476830-308039Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
transcript:BL76393_cuf0transcript:BL76393_cuf0-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000106genomeSc0000106:736251..736855 +
Properties
Property NameValue
Transcript idBL76393_cuf0
Biotypeprotein_coding