transcript:BL73271_cuf0 (mRNA) - B. lanceolatum

Overview
Nametranscript:BL73271_cuf0
Unique Nametranscript:BL73271_cuf0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

protein sequence of transcript:BL73271_cuf0

>transcript:BL73271_cuf0-protein ID=transcript:BL73271_cuf0-protein|Name=transcript:BL73271_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=211bp
TRAQQVLTLRGLATKSSTPEAGEVDRILSDLGLDRKDLSTDQRRRVYRTV
DRFQHDIVFSRGPLDLGRTDKVKHKIDTGSARPVKLAPRRYSPHQREEMA
RCLQGMREIGIIRESHSPWGAPVVLVKKPDGSTRFCVDYRKLNDCTLKDA
YPLPRIDDALDALGGAKFFSTLDLVSGYHQVEVEESSKEKTAFTTPLGLW
EFNTLPMGLCN
Run BLAST on NCBI

mRNA from alignment at Sc0000232:425337..425971+

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>transcript:BL73271_cuf0 ID=transcript:BL73271_cuf0|Name=transcript:BL73271_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=635bp|location=Sequence derived from alignment at Sc0000232:425337..425971+ (Branchiostoma lanceolatum)
GCACAAGGGCACAGCAAGTGTTGACGCTGAGGGGTCTGGCCACCAAGAGT TCTACTCCCGAGGCAGGAGAGGTGGATCGCATCCTGTCAGACCTTGGTCT GGACAGGAAGGACTTGAGCACAGACCAGCGTCGGCGTGTGTATAGGACAG TTGATCGATTTCAACATGACATTGTGTTCTCACGTGGGCCGCTGGACTTG GGAAGAACTGACAAGGTCAAACACAAGATTGACACCGGTAGTGCCAGGCC AGTGAAACTTGCACCTAGACGGTACTCACCCCACCAGCGAGAAGAGATGG CGCGCTGCCTCCAGGGCATGCGAGAGATAGGCATCATCAGGGAGTCACAC TCTCCCTGGGGAGCTCCTGTAGTCTTGGTAAAGAAACCTGATGGGTCAAC ACGATTCTGTGTGGACTACAGAAAGCTCAATGACTGTACACTGAAGGATG CATATCCCCTACCTAGGATAGACGACGCCCTGGACGCTTTGGGTGGAGCA AAATTCTTCAGTACCCTTGATCTGGTGAGCGGTTACCACCAAGTAGAAGT AGAGGAAAGTAGCAAAGAGAAGACAGCGTTCACTACACCTCTAGGATTGT GGGAGTTCAACACCCTTCCCATGGGCCTTTGCAAC

Coding sequence (CDS) from alignment at Sc0000232:425337..425971+

>transcript:BL73271_cuf0 ID=transcript:BL73271_cuf0|Name=transcript:BL73271_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=633bp|location=Sequence derived from alignment at Sc0000232:425337..425971+ (Branchiostoma lanceolatum)
ACAAGGGCACAGCAAGTGTTGACGCTGAGGGGTCTGGCCACCAAGAGTTC
TACTCCCGAGGCAGGAGAGGTGGATCGCATCCTGTCAGACCTTGGTCTGG
ACAGGAAGGACTTGAGCACAGACCAGCGTCGGCGTGTGTATAGGACAGTT
GATCGATTTCAACATGACATTGTGTTCTCACGTGGGCCGCTGGACTTGGG
AAGAACTGACAAGGTCAAACACAAGATTGACACCGGTAGTGCCAGGCCAG
TGAAACTTGCACCTAGACGGTACTCACCCCACCAGCGAGAAGAGATGGCG
CGCTGCCTCCAGGGCATGCGAGAGATAGGCATCATCAGGGAGTCACACTC
TCCCTGGGGAGCTCCTGTAGTCTTGGTAAAGAAACCTGATGGGTCAACAC
GATTCTGTGTGGACTACAGAAAGCTCAATGACTGTACACTGAAGGATGCA
TATCCCCTACCTAGGATAGACGACGCCCTGGACGCTTTGGGTGGAGCAAA
ATTCTTCAGTACCCTTGATCTGGTGAGCGGTTACCACCAAGTAGAAGTAG
AGGAAAGTAGCAAAGAGAAGACAGCGTTCACTACACCTCTAGGATTGTGG
GAGTTCAACACCCTTCCCATGGGCCTTTGCAAC
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
gene:BL73271gene:BL73271Branchiostoma lanceolatumgene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BL73271_cuf0-E1BL73271_cuf0-E1-1564476830-400674Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
transcript:BL73271_cuf0transcript:BL73271_cuf0-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000232genomeSc0000232:425337..425971 +
Properties
Property NameValue
Transcript idBL73271_cuf0
Biotypeprotein_coding