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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL71083_cuf0 >transcript:BL71083_cuf0-protein ID=transcript:BL71083_cuf0-protein|Name=transcript:BL71083_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=440bp
AKHVVRTSYACGECEYKSQHRSALTRHMKRHPGKNTYICAECGYRTARKS
RLCEHMGKHTGEKPYKCDQCDYSTVRKCDLDKHIFKHTGEKPYMCDECGH
RSAFKSNLSVHMRKHTGEKPYKCDQCNYSAASKYNLDQHMETHTRKKLMC
GECDYWTTLESHLSNHLIKHTGERPFKCDQCDYSTARKCDLDRHIFKHTG
DKPFKCDQCDYSAVQKCDLAKHKFKHTGEKPYMCDECGHRSAFKSNLSVH
MRKHTGERPYKCDQCNYSAASKYNLDQHMETHTRKKLFICGECDYWTTLK
SHLSNHLIKHTGERPFKCDQCDYSTARKCDLDRHIFKHTGDKPFKCDQCD
YSAVQKCDLDKHVFKHTGEKPYMCEECGYRSNFRSNLSVHMRKHTGEKPY
KCDQCDFTASANYNLDEHMAKQTGEKPYKCDQCDYSTVRK Run BLAST on NCBI mRNA from alignment at Sc0000155:692525..694832+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL71083_cuf0 ID=transcript:BL71083_cuf0|Name=transcript:BL71083_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=2308bp|location=Sequence derived from alignment at Sc0000155:692525..694832+ (Branchiostoma lanceolatum)
TGGCAAAACACGTTGTACGTACCTCCTACGCATGTGGGGAGTGTGAGTAC
AAATCACAACATAGGTCTGCACTGACCCGACATATGAAAAGGCATCCAGG
CAAGAATACCTACATTTGTGCGGAGTGCGGTTACAGGACGGCTCGGAAGT
CTCGCCTTTGTGAACACATGGGAAAACATACCGGTGAGAAACCGTACAAG
TGTGACCAGTGTGACTATTCAACTGTACGAAAATGCGACTTAGACAAACA
CATCTTTAAACACACTGGTGAGAAACCTTACATGTGTGACGAGTGCGGGC
ACAGGTCAGCTTTCAAGTCCAACTTATCTGTACATATGAGAAAACATACA
GGTGAAAAACCGTACAAATGTGACCAGTGCAACTATTCTGCTGCCTCAAA
ATACAATTTAGATCAACACATGGAAACACACACCCGAAAGAAATTAATGT
GTGGGGAGTGCGATTACTGGACGACTCTAGAATCTCATCTGTCCAACCAT
CTGATAAAACACACCGGTGAGAGACCTTTCAAATGTGACCAGTGCGACTA
TTCTACTGCAAGAAAATGTGACTTAGACAGACACATCTTCAAACATACCG
GTGATAAACCTTTCAAGTGTGACCAGTGTGACTATTCTGCTGTACAAAAG
TGTGACTTGGCTAAACACAAGTTCAAACACACTGGTGAGAAACCTTACAT
GTGTGACGAATGCGGGCACAGGTCAGCTTTCAAGTCCAACTTATCCGTAC
ATATGAGAAAACATACAGGTGAAAGACCGTACAAATGTGACCAGTGCAAC
TATTCTGCTGCCTCAAAATACAATTTAGATCAACACATGGAAACACACAC
CCGAAAGAAACTGTTTATTTGTGGGGAGTGTGATTACTGGACGACTCTAA
AATCTCATCTGTCCAACCATCTGATAAAACACACCGGTGAGAGACCTTTC
AAATGTGACCAGTGCGACTATTCTACTGCAAGAAAATGTGACTTAGACAG
ACACATCTTCAAACATACTGGTGATAAACCTTTCAAGTGTGACCAGTGTG
ACTATTCTGCTGTACAAAAGTGTGACTTGGATAAACACGTTTTCAAACAC
ACTGGTGAGAAACCTTACATGTGTGAAGAGTGCGGGTACAGGTCAAATTT
CAGGTCAAATTTATCTGTACATATGAGAAAGCACACAGGTGAGAAGCCTT
ATAAATGTGATCAGTGTGACTTTACCGCTTCAGCAAATTACAATTTAGAT
GAACACATGGCAAAACAAACCGGAGAGAAACCCTACAAGTGTGACCAGTG
TGACTATTCAACTGTACGAAAATAACATTTGGACAGACACGTTTTCAAGC
ACACTAGAGAGAAACCCTACATTTGTGCGGAGTGTGGTTACAAGACGGCT
TGGAAGTCTCACCTACATGTATGTGCACACATGAGAAATCATACCGGTAA
GAAACCGTACAAGTGTGACCAGTGTGACTATTCTACTGTAAGAAAATATG
ACTTAGCCAAACACTTCGTCAAACATACCGGTGAGAAACCTTACATGTGT
GAAGAGTGCGGGTACAGGTCAGCTTTCATGTCAAACCTATCCGTACATAA
GAGAAAACATGCAAAGACCACAGAAATGTGACCAAAACGTTAACGACTAT
TCTGCTTTTGAAATTGCAACTTTGTGACAAACGCTTTCTCAAACAGGCAG
ATTAGAAACATTACACATGTGCAGATTGAGGGTCCTTGGCGGCTTATAGG
TCTAACATATCTGTACGTACGTGAAAGCACACTGCAGAAAAGGGTAGTTT
TATCAGCGCAGGTGGAGGAAGGACGGTCAATGGGAGCTGAAGAGATTTAC
TTATTGTATCAATTGGAATATGTGCAAGTGACAAAATTCTCAACAATGGG
AGTATGCTGACAAATGTCGGAGAACATTGGCGAGGAACTATAGTACTATG
CTGTACTATTGTACGTGTGGATATGGTTGGCTGAAAAGATGCTGTATGGC
TTCTCTGCCACCTGTCCCGGCAACGGACGCTCTATCGTATATTGTTTAAC
TTGTAAGTTTTTTTATTGTTATTATAAACATACTATCTGTTCAACTAACA
CTCGATGGGTAGACTATAGTAATATACTAACGCAGTGCTCTATAATGTTT
TTAATGAAGTAGTTTTGTCTCTTTTAATTACTTGATTACAAGATTTCTGT
AATTTCGTTTTTTTAACCACAATTCAAATTTCTGTATGTACATTATGGTT
ACACATTGAGGTATCCGTTCCAGTTTGATGCTTTTCAGATAAAGGCAATA
AATCAACA Coding sequence (CDS) from alignment at Sc0000155:692525..694832+ >transcript:BL71083_cuf0 ID=transcript:BL71083_cuf0|Name=transcript:BL71083_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=1323bp|location=Sequence derived from alignment at Sc0000155:692525..694832+ (Branchiostoma lanceolatum)
GCAAAACACGTTGTACGTACCTCCTACGCATGTGGGGAGTGTGAGTACAA
ATCACAACATAGGTCTGCACTGACCCGACATATGAAAAGGCATCCAGGCA
AGAATACCTACATTTGTGCGGAGTGCGGTTACAGGACGGCTCGGAAGTCT
CGCCTTTGTGAACACATGGGAAAACATACCGGTGAGAAACCGTACAAGTG
TGACCAGTGTGACTATTCAACTGTACGAAAATGCGACTTAGACAAACACA
TCTTTAAACACACTGGTGAGAAACCTTACATGTGTGACGAGTGCGGGCAC
AGGTCAGCTTTCAAGTCCAACTTATCTGTACATATGAGAAAACATACAGG
TGAAAAACCGTACAAATGTGACCAGTGCAACTATTCTGCTGCCTCAAAAT
ACAATTTAGATCAACACATGGAAACACACACCCGAAAGAAATTAATGTGT
GGGGAGTGCGATTACTGGACGACTCTAGAATCTCATCTGTCCAACCATCT
GATAAAACACACCGGTGAGAGACCTTTCAAATGTGACCAGTGCGACTATT
CTACTGCAAGAAAATGTGACTTAGACAGACACATCTTCAAACATACCGGT
GATAAACCTTTCAAGTGTGACCAGTGTGACTATTCTGCTGTACAAAAGTG
TGACTTGGCTAAACACAAGTTCAAACACACTGGTGAGAAACCTTACATGT
GTGACGAATGCGGGCACAGGTCAGCTTTCAAGTCCAACTTATCCGTACAT
ATGAGAAAACATACAGGTGAAAGACCGTACAAATGTGACCAGTGCAACTA
TTCTGCTGCCTCAAAATACAATTTAGATCAACACATGGAAACACACACCC
GAAAGAAACTGTTTATTTGTGGGGAGTGTGATTACTGGACGACTCTAAAA
TCTCATCTGTCCAACCATCTGATAAAACACACCGGTGAGAGACCTTTCAA
ATGTGACCAGTGCGACTATTCTACTGCAAGAAAATGTGACTTAGACAGAC
ACATCTTCAAACATACTGGTGATAAACCTTTCAAGTGTGACCAGTGTGAC
TATTCTGCTGTACAAAAGTGTGACTTGGATAAACACGTTTTCAAACACAC
TGGTGAGAAACCTTACATGTGTGAAGAGTGCGGGTACAGGTCAAATTTCA
GGTCAAATTTATCTGTACATATGAGAAAGCACACAGGTGAGAAGCCTTAT
AAATGTGATCAGTGTGACTTTACCGCTTCAGCAAATTACAATTTAGATGA
ACACATGGCAAAACAAACCGGAGAGAAACCCTACAAGTGTGACCAGTGTG
ACTATTCAACTGTACGAAAATAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000155 | genome | Sc0000155:692525..694832 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL71083_cuf0 |
| Biotype | protein_coding |
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