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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000098:799690..807732+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg01753.0 ID=Blg01753.0|Name=Blg01753.0|organism=Branchiostoma lanceolatum|type=mRNA|length=8043bp|location=Sequence derived from alignment at Sc0000098:799690..807732+ (Branchiostoma lanceolatum)
GCCTACAGTAGGCCAAGTCACACCTTTATGCGGCTTAGCTATACTTTTTT
CTAACATCACTTGTGTTACGTTGCTATCAGATATTGTCTCCACCTGCAAT
ACAAAGTTTATTTTCCTCAGTACGTTACTATACGTTGGAACGTACATTAC
AGGACCATTTTTGTGTGAGTCAGTCGACTATATATATGATAGTGACTATG
TTGTTACTTTGGCTTATCTGATTTGGTGGCTCCAATAGACTGTAAACTTA
AAGGTAACTCACCATAATAATTATTTCAAAATTGTTGTATATCTTCATTA
CAGTGTTGTACATGAACCATGGGGAAGATTCTAGCAATATTTGCTGTCCT
GTTGGGGACGATAAACGGGTGAGTTAACTGAATTCTTACTACTCATTCTT
AGATTCAATTTACTAAGTTTTATGAGAGCATCTTAGATTTGTTTTTCACT
GATTCAGTACGGATAGGTTTAGACAGAACACCCTTTCTGTGCCCCACAGC
AAGCTTGTAAATGTTGTGCACGGAACCCCCCGAGCGACACGTTTGCGACA
CAATAGGTTATAATGATATAGCATACCGATCTTTTCAATCCTGTGGAAGG
GCATTGATTGGTGAATTTGGAGGCCAATTACCTCGACCCCCCCTATCTTT
CTCAGCGTCATTTTCACACTTCAAGAACTTTGCACAAAGACACGTACACA
GACACACACACAGACACACACACACAAACCTACACACACATACGCAGTCA
TGATAACATCACAGAAACTCAAACACAGAGAGAGAGAGGGACAGAGTGAG
AAACACACGCGCGCGCATGCACGCAAATACAAACGTACGCAAACGCACAC
ACAACCATAGAAGCACACGCTCACACATACACACACACATATATACATGT
ACTGACATACATGTACATTCATTTAGTTACACAAAAACTACACACACACA
CACACACATATACTGACATATATGTGCATAGTTACACAAAAAATTACACA
CACACACACACACACACACACACACACACACACACACACACACACACACA
CTGCACAACTCCTGCTCACCTCAGCACACAGAGTTTAAGGAATTTCGGCG
ACACTACTGAGACATGTTGTATCTTCAGGCTAGCAGCTCTGTCGTGTTTG
GAGTGCGGCACGTACACCTGTACGCCATTGCCTCGCTGCCGCGGTGACGT
CACCAAGGGTGTGTGTAACTGTTGTGACGTGTGCGCTAAAGTAAGTTCCC
ATGGTTTAATTATCTAGTGTCTTGTATGGTAACGGTGTATAAATTGTCTT
AGCAGTTGACATCAGTCTATCAGTCAAGTTGTGCATGGACTGTTACTTCT
CTACTGCCGGCGTGTACTTCATAAGGGGGATATTTTCATTGATTTTCATA
ACGCGTTTGAAGTAAGTGCAAATGTAAATAGCCGTGTATCGCGTTACATA
AAAATTATGAGTTTCATCACCAACACCAATGTCCTTCAGAATTCTTTTTT
TTCTTCAACCGATGACGAAAACCTGGTTTATGCTTCGGCCCCAATTGGAA
AAAGGGCACCGCTGGGTAGTTCACGGGCTGTTTTTGGCACTTTCGGGCGT
GACCTCTACGTGGTCCCGTCGGACACCCTTCGGTTTCCGGGATCCCGAAT
CAATTTAACTAAGACTTGAATTGAACGCGGGAGTCGGTAACAGATGGACG
CCGTAAGCTAATCGTGCGAGTACCCATCCACCGGGACAAATTTCTGGCTC
CGGGGCCCGGCCGGGACTACACCCCCGACGGGCACCGGCCGGGATTACAC
CCCGACGGGCACCGGCCGGCGCAATTGGGACTATAAAGCATAAGTGATTA
TTTTGTTTCGCAGATTGCAGGCGAGGGCTGTGGAGGTCCCTGGGGCATCG
CTGGTACCTGCTCCCGCGGACTGACTTGTGTTAAGGACCCAAATGACCCT
TTGGAGGACTTCCAGTCCAGCGGNACACACACACACACACACACACACAC
ACACACACACACACACACACACACACTGCACAACTCCTGCTCACCTCAGC
ACACAGAGTTTAAGGAATTTCGGCGACACTACTGAGACATGTTGTATCTT
CAGGCTAGCAGCTCTGTCGTGTTTGGAGTGCGGCACGTACACCTGTACGC
CATTGCCTCGCTGCCGCGGTGACGTCACCAAGGGTGTGTGTAACTGTTGT
GACGTGTGCGCTAAAGTAAGTTCCCATGGTTTAATTATCTAGTGTCTTGT
ATGGTAACGGTGTATAAATTGTCTTAGCAGTTGACATCAGTCTATCAGTC
AAGTTGTGCATGGACTGTTACTTCTCTACTGCCGGCGTGTACTTCATAAG
GGGGATATTTTCATTGATTTTCATAACGCGTTTGAAGTAAGTGCAAATGT
AAATAGCCGTGTATCGCGTTACATAAAAATTATGAGTTTCATCACCAACA
CCAATGTCCTTCAGAATTCTTTTTTTTCTTCAACCGATGACGAAAACCTG
GTTTATGCTTCGGCCCCAATTGGAAAAAGGGCACCGCTGGGTAGTTCACG
GGCTGTTTTTGGCACTTTCGGGCGTGACCTCTACGTGGTCCCGTCGGACA
CCCTTCGGTTTCCGGGATCCCGAATCAATTTAACTAAGACTTGAATTGAA
CGCGGGAGTCGGTAACAGATGGACGCCGTAAGCTAATCGTGCGAGTACCC
ATCCACCGGGACAAATTTCTGGCTCCGGGGCCCGGCCGGGACTACACCCC
CGACGGGCACCGGCCGGGATTACACCCCGACGGGCACCGGCCGGCGCAAT
TGGGACTATAAAGCATAAGTGATTATTTTGTTTCGCAGATTGCAGGCGAG
GGCTGTGGAGGTCCCTGGGGCATCGCTGGTACCTGCTCCCGCGGACTGAC
TTGTGTTAAGGACCCAAATGACCCTTTGGAGGACTTCCAGTCCAGCGGAA
CGTGTGGTGGGTAGATCTTACAATTGGCTACTCCAGTACTCCACGTTATC
TATTTCGGCTGCATCAAATTACAAGAGTTCGGAGACCTCATACCTCCATG
AAATATTTCAATTATGCACAGACACAAACAAAATAGTGCCTCCATTTTTA
TGGAGGTGCCTCCATTTTTATGGAGGTAATGAATAAACCTTAACCAGTCT
TAATCAATAGTTGTCAAACACCAATGTATTGCTCATGGCGAGGTACTGTA
AATGCATTTAAGTTCGCGTGGGTTTTGTTTCGCGCTAAGGGGAAAATGGA
GTGTTCGCGGTAGTTTTAAGTTCGCGGCAGTGCTATAGTAGCATACTGCT
ACAGTATTGGACAAAAATATTCGCGGTGGCTTTAAGTTCGCGGTGAAAAG
TCGCCCCGAAAACATAAAACCACCGCGAACATTTCTGTATTTACAGTATA
AAGATAATCTTTACTGCTCATTGATCATTTGTTTGGACGTTCACCGTTCA
TCATCATTGATTTGAATTACTTATATACCTATATGTATGTCTGTATTTCT
GTATGTCTGTATGTCTGTTTGTCTGTATGTCTGTATGTCTGTTTGTCTGT
ATGTCTGTATGTCTGTATGTCTGTATGTATGTCTGTGTGTCTGTCTGTAT
GTCTGTATGTCTGTTTGTCTGTTTGTCTGTATGCCTGTATGTCTGTTTGT
CTGTATGTCTGTATGTCTGTATGTCTGTATGTCTGTCTGTATGTCTGTAT
GTCTGTTTGTATGTATGTCTGTTTGTCTGTATGTCTGTATGTCTGTATGT
CTGTATGTATCATTAATCGATCTTTTCCGTAGAATGTCCTGCACACAGTA
GTTGGAACCAGTGCGGCTCGGCGTGCCCGACAACGTGTGACAATCTCGAT
ACGAACGTGATCTGCCCGGAGGTCTGCGTCCCCAGCTGCACATGTGATGA
CGGGTACGCGCTGAAGGACGGGAACTGCATCCTGGAGGATCAGTGCGGGG
GGACAGGTGTGTGTGTGATCGCCTTCTGGTCTATGTATGAGCAAGGTGTG
GCTGATAGTCACTCTTCCGACCGTTCAAACTCAATGCACATAAGTGTTTT
GTACATCTAAACTTTCAATATGTCAAGGTCGCATTGTCTCATGTATTCTG
CCGTATTATTTTGTACTTGAAGGAACAGGCATGACACTAAGTGAAATAAC
AATAAGAACAAAAAACTGAGAAGGGTCCTGGTTGCCAGATTTTCTGTGGT
GTCCCAACGGTCAAATAGTTGGACTAGGGGATGAGATGATATGAGAGACA
CATACATGGGTCCTACATGTAGTCCCAGATACGCATCAAGTCGCTCGACA
AACTTCCACGTACGAGAAAGATCATACCATTGATCATACTGACTAAAAGA
TACAAATACAGACATATGGTAGCAACCTACATCAGTTACTCCAAAGTGCT
ACTCAATCATTCAATTTGAGTTTCACTGGACTTTTGGCACTGTTCATCAT
TAACCGATTTCATCCCTAGAATGCCCTGAGCACAGTAGTTGGGACCCGTG
TGGCCTGGCGTGCCCGACAACGTGTGACAATCTTGGTACAAACATACTCT
GTCCGAGGATCTGCATCGCCGGCTGCGCATGTGATGACGGGTACGTGCTG
AACAACGGAAGCTGCATTCCCGAGAACCAATGTGGGGGGACAGGTCTGTG
CGATCTAGTCTCTACCAGACTAAACTACGCTGGATTTAGGGAGAAGTTTT
GCCAGGGGAGTTTGGCCACCATAGGTTTTTCGAGCTCCGGCCGGCGAGGG
AAATGTTATCCTCAGAGTCCCGTGGACTGACTCTCCTGGCCAATTGTATC
ATTTACCCTATTTTTGCCGAATTCTGCGATCCATAACCACGTAGGGATGC
CACTGGTGGAGGCTATGTTGACAGACATATGGTGGATATCCAACATCAAC
AACCCCTTACATTGAGTGTAGCGTTATGTAATCCAATTGATTGATCAACC
AATGACAAATCGTTTGTTCCCTCCTGAACAGGACCTACAAGACGACCACC
TTGTCGACCCCACAGCGAGTGGAACGAGTGTGGTTCAGCCTGTCCCGCCA
CCTGTGCCGACCCGAACCCCGAGCAGCCGTGCTTGGCCGTGTGCGCTCCA
CGGTGCGTGTGTGTGGAGGGGTACGTGATGGACAACGGCAACTGCATCCC
GGTGGACCGATGCGGCAGCGATGGTTGCGACTATGAAGGCAACCAATATA
ATGTAAGTCACGTATAAGTTCAACTGGATTTTAAGATTTACTCATCATAA
ACTCAACTCTCCATGCAAACTCTGGACGCTAACTTAAGACGAGGATCTTA
TAAGCAATATACTACCTCTTATCCGAACACTATGATATGATATGATATTA
TATTAAATGATTTGATATGTAAAGTACACAACTCATCTAATGCGGGATTA
CGTCTAGTTACCGCATACAAGACCTGCTAGAAATTATCAAAACTAACGAC
TGATATTGATGATAATGTCATATTGTTGTGACAAAAGAATCTTCAGACCC
AGTTAACCATGATACCCATTCCACTCTGGAATACTAAAATCTATTACTTC
CCAATTTCCTTCTCTTCTTGGCTATCTCGTGAACTTACTTTCTCACAGCA
ACTGTCTTCAGATCCTCTGTCTATAGTTGGACAGTAATGATTTTGACAGA
GAAACATTTACTTTTACAAACAGCTTGGGGCACATGTACTGCGTCAACAT
TTACTGTTCAAGTTGTATCCCCTTAGTGCACACCTTTAAGTCTTACATGT
TATATGCACTATGTAACATCTCGAAATTTACATTGCGTAGGATGGAGATG
AGTGGGCTGTGCGAGAGTCTCCAGGACTAGGCTGCCAGTGTGAGGGCACA
GAGGTGGTTTGCTATGTTGTTGACTGTGCACCCGGCTACCAACACGTCAT
CGGGAGGGACGGGCTCTGGACATGCGAGCGAAAAAGTATGATATGCACAT
TTGTGAATACTAGTCATCCAGATCCAGGAAATAATGAATAGAATTAAATC
TTCACCACTGGATTACCACTTTTAATAATTATTTTCATGCATGAATTGGA
TTACATGACGCTACACTAAAATGTAAGGGGTTGCTGGTCACTGATGAAAA
GTGTTAGATGGACACCTGAAACGCGGAAAATAAAATGCGGCAATCCAGTG
GTAAAGATTCAATTCTGTTCTTCACTCATGTTATGTACAGTCTTGAAAAA
ATATATCATTCAGTAAACCTTTCGTAGTTCATGCAGGAATCTGACAGTTA
ATTCCAGAATCCCAATGATTTTTGTAAAGAAAATGTGTAGGAATGAATGT
TGACACACGAATGATAACGAAAAATGCTAACGTTGATTATCTGATTGTAC
AACGCTATGTTGTTGAATGCTCGTGTACAAAGGTCAAGGACAAAACGCAT
ATTTTGCGGGAGCGTCTGAATTGATATTCACTTCATTTTTCATCGTTCTT
AACTCATTGAAAAGACCTTATAAATGGTTAATTTTTGGTGCCTCTTTAGC
GATTACAAACTGCTTATCATGCTTCTCATTTCGCTTTAACACAGATGAGT
GCCCTCAGGGATATTTACGCCCAAGGAGAAGCGTTAGGAGGTGCTACAAG
CTGGTGACGACTGGGGCCAGTTACCAGAACGCAGAACAGCAGTGTCTCCA
GGACGGCGCTCGACTGGTCACCCTCAAGGCGAAGCAGATTAACAAGTGGC
TTAAGGCAAGGACCAGTCGTGTTGTTCATGAGATTGGAAAAGCGACTACT
TTCGTTTGTTTGCTTCTTTGTTTCACATTGTTCTATGCGGGCATTCTATT
GCTGTTTAAGCCGCGTCATCATCGGTCAGTGGTTCTCAGGAGCATCTGTA
GCATCACCGGGCATGCACCATTGATACAGAACACAGAGAATGAAAGTGAT
CGTCTGATGCTGAGTCCCGGTTACAATATATAGCCGACCATGGCCTCCCG
ACCTTCCCCCAACCATGGTTGGGAGTGGGTTGCGAGCAAGGTCGGCTGTG
GTCGGCTGGTGGTCGGCGCGGTTGGCTCGTGGTCGGCTGATAGTTAGGAC
CTGGTTGCTGCTAAAAGATAGGCGTGGCCTAAAACTAGTGTACAAAATAT
TGTGTAATCGGGCCCTAATTGAGTGCAACTTTCCACAGAACGAGGCTCGG
CGTGAAGGCTCGGACATGTGGATCGGACTGAGTTACAGGGTGACCGAAAA
GAAGCTGGTCTGGAGTGACGGCGACCAGTACAACACGAGCAAGCTTAAGC
GCAACAACTTCTGGGCCAAGGGCGCCTTTCGACAGTACACGGCTGATAAG
GACTGCGTCTACATGAGCAGGAGGGATGGATACCGCTGGCGCTTCGGCAA
CTGTGCTGATGAGCGTCTGTTTACCTGTGAGTTTGTGCTGGGTTGAGAGT
GCAATGTTCGGTGTTCCTTGATGGTCTACAGCACTTACGATTGCGTAATC
CACATTTAGGCTAAGCTGTATTTGTAAAATCGTTCTCTGTACTTGCTTAT
CTATAGCAATGTATAATAAGTCATAGGATTGCAATGTACAATGTAATATC
TATCCACCACCATCTTAATACATATGCTATACATGTAACTATAGGTACGT
CAAACTACTGTAGCTTTCTTGTGAACCTTTTCACGTCAATTTTGCTTTAA
GTCAGACTTCACAACATTCATTGGGTTTAAAGGGTACATATATTCGGAAC
TTCTGTTTTCTATTTCTATTCGGATTTCTATTGTGGTATTTTTCTTTCTG
TATTGCAATATACACTAACACGTCAATTACATGTATACAGTCCAAGACAC
GTAAAAGCAGCTTATGTTAAAATGTACAGAGTGTGTAGTGCCTAAATCAA
ATCAGGGCTAGACTCTTTTGATTCTAGCAGGTTTGTCATATAAACATATA
GAACGAGATGCTCCTATATTATGCATATTATGCCTTTGCTGCTATCTATC
TATATGTGTGGTTAAGTCTAGTCCCCGGGGATATTTGATAGCATATACTA
CTATTTGAACTGTCTGTTCTTACTCTCCAAGCAGAGGAGGGGT Coding sequence (CDS) from alignment at Sc0000098:799690..807732+ >Blg01753.0 ID=Blg01753.0|Name=Blg01753.0|organism=Branchiostoma lanceolatum|type=CDS|length=1239bp|location=Sequence derived from alignment at Sc0000098:799690..807732+ (Branchiostoma lanceolatum)
ATGGGGAAGATTCTAGCAATATTTGCTGTCCTGTTGGGGACGATAAACGG
GCTAGCAGCTCTGTCGTGTTTGGAGTGCGGCACGTACACCTGTACGCCAT
TGCCTCGCTGCCGCGGTGACGTCACCAAGGGTGTGTGTAACTGTTGTGAC
GTGTGCGCTAAAATTGCAGGCGAGGGCTGTGGAGGTCCCTGGGGCATCGC
TGGTACCTGCTCCCGCGGACTGACTTGTGTTAAGGACCCAAATGACCCTT
TGGAGGACTTCCAGTCCAGCGGAACGTGTGAATGTCCTGCACACAGTAGT
TGGAACCAGTGCGGCTCGGCGTGCCCGACAACGTGTGACAATCTCGATAC
GAACGTGATCTGCCCGGAGGTCTGCGTCCCCAGCTGCACATGTGATGACG
GGTACGCGCTGAAGGACGGGAACTGCATCCTGGAGGATCAGTGCGGGGGG
ACAGGACCTACAAGACGACCACCTTGTCGACCCCACAGCGAGTGGAACGA
GTGTGGTTCAGCCTGTCCCGCCACCTGTGCCGACCCGAACCCCGAGCAGC
CGTGCTTGGCCGTGTGCGCTCCACGGTGCGTGTGTGTGGAGGGGTACGTG
ATGGACAACGGCAACTGCATCCCGGTGGACCGATGCGGCAGCGATGGTTG
CGACTATGAAGGCAACCAATATAATGATGGAGATGAGTGGGCTGTGCGAG
AGTCTCCAGGACTAGGCTGCCAGTGTGAGGGCACAGAGGTGGTTTGCTAT
GTTGTTGACTGTGCACCCGGCTACCAACACGTCATCGGGAGGGACGGGCT
CTGGACATGCGAGCGAAAAAATGAGTGCCCTCAGGGATATTTACGCCCAA
GGAGAAGCGTTAGGAGGTGCTACAAGCTGGTGACGACTGGGGCCAGTTAC
CAGAACGCAGAACAGCAGTGTCTCCAGGACGGCGCTCGACTGGTCACCCT
CAAGGCGAAGCAGATTAACAAGTGGCTTAAGAACGAGGCTCGGCGTGAAG
GCTCGGACATGTGGATCGGACTGAGTTACAGGGTGACCGAAAAGAAGCTG
GTCTGGAGTGACGGCGACCAGTACAACACGAGCAAGCTTAAGCGCAACAA
CTTCTGGGCCAAGGGCGCCTTTCGACAGTACACGGCTGATAAGGACTGCG
TCTACATGAGCAGGAGGGATGGATACCGCTGGCGCTTCGGCAACTGTGCT
GATGAGCGTCTGTTTACCTGTGAGTTTGTGCTGGGTTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg01753.0-exon-Sc0000098-1570713199:799690..799853 | Blg01753.0-exon-Sc0000098-1570713199:799690..799853 | Branchiostoma lanceolatum | exon |
| Blg01753.0-exon-Sc0000098-1570713199:799993..800057 | Blg01753.0-exon-Sc0000098-1570713199:799993..800057 | Branchiostoma lanceolatum | exon |
| Blg01753.0-exon-Sc0000098-1570713199:801793..801904 | Blg01753.0-exon-Sc0000098-1570713199:801793..801904 | Branchiostoma lanceolatum | exon |
| Blg01753.0-exon-Sc0000098-1570713199:802528..802645 | Blg01753.0-exon-Sc0000098-1570713199:802528..802645 | Branchiostoma lanceolatum | exon |
| Blg01753.0-exon-Sc0000098-1570713199:803472..803645 | Blg01753.0-exon-Sc0000098-1570713199:803472..803645 | Branchiostoma lanceolatum | exon |
| Blg01753.0-exon-Sc0000098-1570713199:804671..804891 | Blg01753.0-exon-Sc0000098-1570713199:804671..804891 | Branchiostoma lanceolatum | exon |
| Blg01753.0-exon-Sc0000098-1570713199:805480..805624 | Blg01753.0-exon-Sc0000098-1570713199:805480..805624 | Branchiostoma lanceolatum | exon |
| Blg01753.0-exon-Sc0000098-1570713199:806234..806394 | Blg01753.0-exon-Sc0000098-1570713199:806234..806394 | Branchiostoma lanceolatum | exon |
| Blg01753.0-exon-Sc0000098-1570713199:806828..807732 | Blg01753.0-exon-Sc0000098-1570713199:806828..807732 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000098 | genome | Sc0000098:799690..807732 + |
Properties
| Property Name | Value |
|---|
| GeneID | Blg01753 |
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