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Sequence
The following sequences are available for this feature:
mRNA from alignment at xpSc0040137:54..5756+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg01638.0 ID=Blg01638.0|Name=Blg01638.0|organism=Branchiostoma lanceolatum|type=mRNA|length=5703bp|location=Sequence derived from alignment at xpSc0040137:54..5756+ (Branchiostoma lanceolatum)
CAATATTTGAAAACAGAAACGTCGTCAACAAGCTAATCCATTAAGCGTCT
TTGATCGTCTCTACTTTACCTTTACAGCGTCTGACCACAAGACATGGATA
AGCTGGGCACGGATTGGTTCAAGGATGTGGAGAACATCCGACAAACTAAA
GAAGAGCTGGAGGAGATTGCGAAGAGCAAGTGAGTTGCAAATCATGTTCA
AATATTCGCGATAGTCACACACTACATAGGTCTTGGACATACGCGATAAA
CAAATCACTAACATTTTGATTGCCCCAGGTTCTAATCATGTGCATTTCGT
CGGCGTATTTATTTGTGACATTTGTATGAATATTGTCATAGATTGTTATG
TTGTGCCTGTCTAATTCTATCGTGATGCCTTGTGTAATGCCCACAGGCTA
GCCACAGGCTAGCTGGAGTCTTGAACAGCTTAACCAATTAAATGTATAAA
TACTTTTTCAGTTTTTCGTTTATTAGATAGCTATATGTCAGATGCATCCA
TGCATGATCGCTATCATTTTATAACACTCTATAATCTGCTGTTTATTGCA
GAGATAACAAAGCATTCCGTGCCGTGGTAGACTTCCTGTGCGCATGTCTG
GACTGTTCCACAACAGAACACCTGGAAGCTTTCAAAAATGTTCTTAGTGA
CAACCTGGTAAAGTGGAAGGTATGGATCATTCAGTCTGTTCCTACGCGGG
AGTGAGGGTCAGTAGTATATAGATGTGAGAGAAAATAAGCGATTATTGTT
GCCTACAAAACTCTGCAACATTGAGTGAAATCATACGTAAATATGGGAGA
CTTACTTATAGACTTAGGGGCTCCCGTGTCGTCCGACACATGAGGCAGTC
ATGGGAAAAAGACAGCAAAATTTAGTTCACTTCTCCTTTATGGACATCTT
TTGATAGCATTCAACGGAATGATTTGAAAACATTCAAATAAAAAGACCAT
TTGTTTTGTTTTGTTTTGTAACGTTTCTACATTCCGAACACATTTGACAG
GGTCATGACAAGGATGTGTGCGAAATTCTGGACAAATTCCGAGTTCTTGA
AGAGAAAACGGACGATGACGACACGTGGTACAACTCACGGGTGGATGATG
CAGTCGAAGAACTGCTGGAGAGGTCAAAGTAGGTCACAGTTACATTATAC
CATTGACAGGAAGTTTAACTGGTGTGTCACGCCTGCTATATAGATACAGA
TACAGATACAGATTTGATTTGATTTTGTTAGAATTGTGACAGTACAATAC
ACGTGGGACACAGGCAGCTATTGCTGGTGTCGTGATCCACACATAAACCC
GTTTTTACACCGGAGTGGAGTGTAAAGTGCCTTTCCCAAGGGCACAACAT
CGTTGGCGTCAGGGGATTCGAACCCGGAACCGCTTGGGCCGAAAACCCTG
CCATTACACCATACGACCCCACGATCTGTACTATCATGATGAGTTGTCAG
CTGGTTTGCCTTTTGCATCAAATTGACAGGAAGTTAGAATGGTGGCCACC
TCTACAACGATAATGTCATCTCACTTCACACGTACATTCAACGTGTGGAA
GAGCTGATGTTTCGAATAGTTATATCATATATGGACATGTGTACTTATTT
TGCATTAAGCATTTACTCATATACTTGTTTAATCTACGGCATGCTTTCAG
AACCTGCCATAAGAAGATCCGACCCAACGTGGTTAGTCTCCTTGTGTTCG
CCCTGAAGAAAGGCACGGAGACACATCTGAACCTGGCGAATGGAATCACG
TCGGCTGATGGCATCGACGACATGCTAAACAAGGTGAGTTCGAAGGAGTT
GTCACCATTCTTCTTTTAGCAATTTTTCATTATTTTTACAATTTGTAGCA
CTTTGAGGCCCGCCCACCGTAACTCCTAAACAACTTATCGTATGACCACC
AAATTCTAGAGCCATGTGTATCGGTCTGCTGTGTTTGACAGGAGCCTCTG
TAGTGCTTATAACTAGGTACAAACTTAGATCGAGCTATGAAGTCACTCAT
CAGGGCTCGAAATACTGGGTGCATGTGCACCTGTGTGCACCCAAAATTGG
AGCTGTGCACCTAATTTTTGACTGTGGGTGCACCAGTGCACCTAGAAATT
TTTGTAAGCTATAGGATAAGGTTACTATTATACGCTAAGTAAGTATACAG
GATATTCTACCAGAAAAAGAAATATAACCTTTTAAAATGTGTTGTACTTT
ATTTGATGTATCACTTTTATAAAATTTTAAGGTTAGCTATAGAATTACAG
ATTGAAGTTCTTAAGAGCGTTAAACATTGTAATTCTGTTTTGCTGGCATT
CAACTTTATTCTATGTGGTGCACCCAAAATTCTTTCTGTGCACCTAATTT
TTAGGGTTGGGTGCATCAGTGCACCTATTTCCAAAAATGAATTTCGAGCC
CTGCTCATGGTCACTCAGCAATTGTATATACTGAACGAAAGGTTTATATT
GATGGCTACTCTTCAAAATACGCCAGTTGATGGATATTACTTGTCCTTTT
GTCTGGTATACTTCTCTCATCTTTTCTCAACGCTCATCTGTATTGGTACA
TCTAGAACTCATGGTGAGAGAAAGGATTTTAGCAACTGTTGACAACTGAT
TTTATCTTTCATTAAGATGAATGATGAGGAGTCGAAGAGTATGCTCGACG
CCTACTTTGGGATGATAAAGGCGGAGACGTTTGATCCCAACTCATCAACT
GCCATCGCAGTTACGTCTGGGCTAAGTTCGAACCTAACAGAGTAAGTTAC
CCTTACACGACTATCTGTCAGACAGAACTGGTGCATCCCATATTCATTTT
TATTGATCAATTATTCTTTGTTTTGTGAGGATTTTCGAAACTTTGAATAC
ATAGAATACAAATTCAAAGACTTGAAGTTTCGATGCTGAGCTTCTTCGGG
TGCTTGATAGGAAACATTTTTTTTTCTATCCTTACTGAATGAATAACTTC
AAAGTAAAGCACATGGGAAACTTTATCAAACCATGTTGCTTGAACGAAAA
TTGTTTTGAAAATACAAGCGAATAGATTATACAGGTTTAGAAATATGTCC
TTTCTGTTTTCAGGAGTGCAAAGAGTACAGAAAATGTAAAAACGCTGTCG
GAGATTATCAACTACTGCTCAGAGAAGGAGCTGTACAATGAAGACGAGCC
AGACCAAGCAACTGCATACGGCATTGCAATCCAGACCTTGATGGTTATTT
TTCTCAGCAAGGTGCCTCTTCCTTTTTTCTATGGTGTATTTGTTTTACCT
GTGAAATATCAATTAATTTCTAACCACGTCAGATTGCAAAGAAAGCACCA
AAAACATAAATTCTCCAGTTTTGTGCAAAAGAGGACGAAACAACAAAACA
CATATTTTGTGATTGCGGAAAGGTGTTTGAATTTTGGCTTAGTGTACAAA
AATGGTAAAGCCAAAAAACAGGGCTCTAATTCAATATATACATTCTGTTG
GGGGATCACTCTGAAGCAGTACCGATACTATGTAATCTTATTTATTTGGG
TAAGGTATAGATTTATTTCATTTGTTAATGATTTCAAGCTTCAGGAAGAA
AATATTGCACGAAAACAGTACAATTTAATTAGTCACAACAGAAAATGGGG
GGGATCTTGAAAATGCATTTACATAGTGTACGAAAATTCAGTGTGCGTGT
GTAATCTTATGTTATATTGCTGTCTTTGTTTTTGTTTTTTAATTCTGTTG
AATTGAAAAAATATTGTTACAAAAACAAATATTACGTTCCTTGCGGTTTA
TACTGCAATAGGTTGAAGCAAAATGCTGTACATTTTCAATATTGTCACAT
TTGAAACATCAAACTGTATTTCAAAGGAAAGAGAACGTCTTCCAAAGAAA
TAGATTGAGCAGGATGCTAACATTTCATAATTGCTAAAGACTGGTTCTAC
GCACAGAACATGAGTAATCCTGAGCACCTCATGTTGGTGACGCCTGGCTT
CATCCGTCTCCTTGGCAACGAAGAGGTGTCCGAGCAGATGGGCCTGTCCA
GCTACGTCAGCATGTTCATGCAGCAGGGGGAGGTCCTGGCTCCACACGCC
GATCCACTCCTGGACGCCTTCATCAACAACGACGCCAATGAAATCTCAAG
TCAGTCATTGCACTTTTTTTCACTTCTGTTTTATGGAGAGACTGCCATAT
GATGTTTTCAAAGGGGTGATGTCTTGGTAGTTTTTTCTATGCCTTCATCC
CTTTATCATATGTTCAAGAGTACAAGTAGGTACTGTACACAGAATCACTG
ATGTAAAAAGACTGCTTTGTTTTATGAAAAATATATTTTGTTGCATGTGA
ATGACCTAATGATTATTTTTGCTTATTAATGTTGTCTCAGATGTGCTGCC
TGCCGTGTACAAGCACAACCCTGAAACATTCCACAAACGCCTTCCTGAAA
TCGTCGAAAAAATGGACGACATTTCTGCTGACCAACATTACGGCTTCTAC
CACCTTTTCCACGAGATATCAAAGTCTGAGCCACAAGTAAGTATGTCTCT
CATCCCTTCGCCAAGCTGCAACATGATATTGCAGGAAGCAAATAATTCAG
CACTGGTGTTCGCCTATTCTCGTCGAAAAAACACTAAAAGCGACATAGAA
AACGCATCTGCTAGAAGTAAGTACTTGATTAATTCCAAGGAATGCTTAGG
TCCCAATTGCGCCGGGTTCCCGAAAGGGGGTGTAGTCCAAACCGGGCCCC
AAAATCACAAAGGTGTCCCGGTAGCCTGCCGTAGGCGTCATGACGCCCGA
AAATGAAAACAAAAATAAGCCCGCCAAGTACCCAGCGTGGTCCCTTCATC
CAATTATAATATAGAAATGATGTTACACCTCCAATCTACAGCTCCTCATG
CCATACGTGGAAAAGTTGGAAGAGGGTTTCGACAACATGTCCTCCATGTC
ATATGCACTACAAACCATGAAAGAGCTCTGCAAATACGACACCAAGCCCT
TCCTGGACAAGATAGACACCTTGGAGAAGGTGTACAAGTCTCAACCGATG
ATGTGCTACTTCATCTACGAGGTGGAGTCTATCATAGGATTATATAATGA
GGTAAGTGGAGACAAGGCATTTAATCTATCGATATTGTGGGTTCTATTGG
AAACTGTTTTGCACTATTCTTTCATGCTGTGCAACGGTGGCGGCGCAGAT
TTAAGTTGCACAGCTTTATTCCGTTGTTACTTTGCCTTGTCTACGTATGT
ATTTCGAATGAATGAATACAAAATGTAATTCTTGGGCCACCGTTGACAAT
TCCCGTTCTCCGTGCAATATGAGAAAAAGTTTCCATGACATTATTGTAAA
AGCATGTTCAACTTCATACATATTTTAAAACTACATGTATATACAAATCG
CGATCATTAAGTACTACATTCATTCCGCCAAAACGAGATATTGAGAGATT
TTATCATGTCTTTCAATTCCTTTACACAGGAGTATGCAGAGCGAGTAATG
GCCCTGTTGACGGACAAGCTCAACACAGGNCGCGAGCTGGAAGTCAACAA
AAGTCACACAGGTCACGTGACACAAGGGTATTGTAGATGGCAGTGGCGGC
CTTGATCGAGGTTTAGATAATTGAACATGCATATAGGATTTCTATACCCA
AAATACTTCTCTTTGCTCAACATCATCAACAAGCCATTATGACAAACTGC
AATTCTATTTTTTTACCGGTTTTGTGATAAGGTTGAGCTCAAAAAAATAA
ACT Coding sequence (CDS) from alignment at xpSc0040137:54..5756+ >Blg01638.0 ID=Blg01638.0|Name=Blg01638.0|organism=Branchiostoma lanceolatum|type=CDS|length=1413bp|location=Sequence derived from alignment at xpSc0040137:54..5756+ (Branchiostoma lanceolatum)
ATGGATAAGCTGGGCACGGATTGGTTCAAGGATGTGGAGAACATCCGACA
AACTAAAGAAGAGCTGGAGGAGATTGCGAAGAGCAAAGATAACAAAGCAT
TCCGTGCCGTGGTAGACTTCCTGTGCGCATGTCTGGACTGTTCCACAACA
GAACACCTGGAAGCTTTCAAAAATGTTCTTAGTGACAACCTGGTAAAGTG
GAAGGGTCATGACAAGGATGTGTGCGAAATTCTGGACAAATTCCGAGTTC
TTGAAGAGAAAACGGACGATGACGACACGTGGTACAACTCACGGGTGGAT
GATGCAGTCGAAGAACTGCTGGAGAGGTCAAAAACCTGCCATAAGAAGAT
CCGACCCAACGTGGTTAGTCTCCTTGTGTTCGCCCTGAAGAAAGGCACGG
AGACACATCTGAACCTGGCGAATGGAATCACGTCGGCTGATGGCATCGAC
GACATGCTAAACAAGATGAATGATGAGGAGTCGAAGAGTATGCTCGACGC
CTACTTTGGGATGATAAAGGCGGAGACGTTTGATCCCAACTCATCAACTG
CCATCGCAGTTACGTCTGGGCTAAGTTCGAACCTAACAGAGAGTGCAAAG
AGTACAGAAAATGTAAAAACGCTGTCGGAGATTATCAACTACTGCTCAGA
GAAGGAGCTGTACAATGAAGACGAGCCAGACCAAGCAACTGCATACGGCA
TTGCAATCCAGACCTTGATGGTTATTTTTCTCAGCAAGAACATGAGTAAT
CCTGAGCACCTCATGTTGGTGACGCCTGGCTTCATCCGTCTCCTTGGCAA
CGAAGAGGTGTCCGAGCAGATGGGCCTGTCCAGCTACGTCAGCATGTTCA
TGCAGCAGGGGGAGGTCCTGGCTCCACACGCCGATCCACTCCTGGACGCC
TTCATCAACAACGACGCCAATGAAATCTCAAATGTGCTGCCTGCCGTGTA
CAAGCACAACCCTGAAACATTCCACAAACGCCTTCCTGAAATCGTCGAAA
AAATGGACGACATTTCTGCTGACCAACATTACGGCTTCTACCACCTTTTC
CACGAGATATCAAAGTCTGAGCCACAACTCCTCATGCCATACGTGGAAAA
GTTGGAAGAGGGTTTCGACAACATGTCCTCCATGTCATATGCACTACAAA
CCATGAAAGAGCTCTGCAAATACGACACCAAGCCCTTCCTGGACAAGATA
GACACCTTGGAGAAGGTGTACAAGTCTCAACCGATGATGTGCTACTTCAT
CTACGAGGTGGAGTCTATCATAGGATTATATAATGAGGAGTATGCAGAGC
GAGTAATGGCCCTGTTGACGGACAAGCTCAACACAGGNCGCGAGCTGGAA
GTCAACAAAAGTCACACAGGTCACGTGACACAAGGGTATTGTAGATGGCA
GTGGCGGCCTTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg01638.0-exon-xpSc0040137-1570713199:54..232 | Blg01638.0-exon-xpSc0040137-1570713199:54..232 | Branchiostoma lanceolatum | exon |
| Blg01638.0-exon-xpSc0040137-1570713199:605..722 | Blg01638.0-exon-xpSc0040137-1570713199:605..722 | Branchiostoma lanceolatum | exon |
| Blg01638.0-exon-xpSc0040137-1570713199:1054..1181 | Blg01638.0-exon-xpSc0040137-1570713199:1054..1181 | Branchiostoma lanceolatum | exon |
| Blg01638.0-exon-xpSc0040137-1570713199:1704..1836 | Blg01638.0-exon-xpSc0040137-1570713199:1704..1836 | Branchiostoma lanceolatum | exon |
| Blg01638.0-exon-xpSc0040137-1570713199:2670..2794 | Blg01638.0-exon-xpSc0040137-1570713199:2670..2794 | Branchiostoma lanceolatum | exon |
| Blg01638.0-exon-xpSc0040137-1570713199:3117..3264 | Blg01638.0-exon-xpSc0040137-1570713199:3117..3264 | Branchiostoma lanceolatum | exon |
| Blg01638.0-exon-xpSc0040137-1570713199:3960..4152 | Blg01638.0-exon-xpSc0040137-1570713199:3960..4152 | Branchiostoma lanceolatum | exon |
| Blg01638.0-exon-xpSc0040137-1570713199:4394..4539 | Blg01638.0-exon-xpSc0040137-1570713199:4394..4539 | Branchiostoma lanceolatum | exon |
| Blg01638.0-exon-xpSc0040137-1570713199:4895..5104 | Blg01638.0-exon-xpSc0040137-1570713199:4895..5104 | Branchiostoma lanceolatum | exon |
| Blg01638.0-exon-xpSc0040137-1570713199:5483..5756 | Blg01638.0-exon-xpSc0040137-1570713199:5483..5756 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| xpSc0040137 | genome | xpSc0040137:54..5756 + |
Properties
| Property Name | Value |
|---|
| GeneID | Blg01638 |
|
