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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000051:348293..354313+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg01344.0 ID=Blg01344.0|Name=Blg01344.0|organism=Branchiostoma lanceolatum|type=mRNA|length=6021bp|location=Sequence derived from alignment at Sc0000051:348293..354313+ (Branchiostoma lanceolatum)
ATGGCGAACAAGGCCGCGGGTGAGTGAGTGTGATAACAATCGGGATACCT
ACAAAAAAGATGAATATCTGTTTCGTATTGTGTGCGTGTGTGTGGGGGGG
GGGGGTCCTTGCCATGGTTTGTAAACATACCACGTCTACCCTAACCATCG
TCNTTCATTATGAAAGTTTTATTGCAAGTTCATGCCTGAAGGCTAATTGC
AGGTACATTGTAGAAAAATAGGGAAAACATGCATGTGACAGTAAACTGTG
ATTGACACTGTTGTGTCAATAGACTACCTAATACCAGGGTTGGCTACATC
TAGACAAGCTGGGTTTGACTTCTTTTATGAATGTGGAGGCAGTGGAAGAC
GACCTTTTTCTATGGTTATTTTTTATCTTAGTTATATATATCTGTATATA
TATATATATATATATATATATATATATATATATATATATATATATATATA
TATATATATATATATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNAACGTACACATATAACGTGCACAAATATT
TTCTACGGTAGCTTTGTTCAGTTCATGGAAAAAATTGTGTCATATCTTAA
ATCATGAACATGAGGACACTTAACGCCTATTTAATGTTGAAAGCATCATC
GTCTCTCCAAAATAGTGCTTGGATCTAGTACAGCTGATCCACAGCAAAGT
ACTGCAAGTGCTACAACAACCGCAGCTCAAACAACAGAGACAGCTTGGCC
CTCGATTAGTTCAGCAACTGCAGCCCAGACAACAGAGACAAGCAGCGCGA
CACATGCAGCAGGGACGACAGACACTGCTGACACGCCGATGACCCCTGTG
ACAGCAGATGCCGTGACTTCGAGGTCAACAACTGCCGAAGAAACCAGCGC
GGAGACCTCCCCAAGTACCTCCACTCCGGGCACTACCCAAGGTAAGTGGA
ACCCTGTCGCAAGGCATCGCCCATTAGCATGCAGACATAGAAACTGATCC
TAAAAATATCAACCAGCGTGGCTTACAGAAAAACAGTCACATGTACACAG
ATTGCCAGAGAGTTAGGAAAGTCTATAGCAAGAACTGGCTATGTAATCTG
CCTCCAAGAGCTTACTTACGCCTGAGACTTCCAACACTATGTTCTATTTC
AGACATAGACGAGTGCTCGACCGGAAGCCACAACTGCGACACCAACGCCG
CCTGTATCAACACCGTTGGTGGCTTCGGGTGCAGCTGTAACACTGGCTTC
CGGGGCAACGGAACAACTTGTGCAGGTGAGAAGGTGCTCTAGTTTAGAGG
TTGCACCACAAGCTTTAGGAATTCAAAGAGTCGGTATCCCAAGCCAGATT
TGTACATTTCATGAGAAAAATAATTTCACGAAATGACAAAAAAGTAAACA
AGTAACCAAGATGTTTACAATTCTTTGAGGTGTCGTATATTGTGCCTTTA
GTGTTCAATGACATTTGAAAAAAAACTAAGAAGTAAATCCTATGTTGTAT
ATAGATGTGGATGAGTGACGACCAAGATATTAACAGTTTTTCTGATGTAT
CATTTTGCTCTTTTATTTTTAGATTATATTTGAGATAACTGAGTGACAAA
TCCTTTGTTTACCTCAGATGTTGATGAGTGTACCGATGGGACCCACGACT
GTCACGTGACCGCCGCCTGCCAGAACACACACGGGTCATTCACCTGCACC
TGTCGTGACGGTTACCAAGGGAACGGCGTCACATGCACAGGTGAGAATCG
TGCATACCTGAGGTCATACATACCTGCCATCGTCAGTACCTTAGAGTGAT
ATGTTTCAGTTGATGTGAACTTTTGTGCGCGTGATAACGTAACGAAAGGA
ATTGTCTGAGGTGCAAGTCTTCATCACTTTTCAACCTATTTGTACGCGAC
TTAGTTAAAATGTTATATTAGGTAGTCCGAAATGTGCCCCACCCGCTCTG
CATCATTTATTTTTTTCCTGCTAACCCTATGCAGATCATGTTGTCATCTT
CATTGCTAATATCAGTTGGGTGATTCTTTTTGTATTGTATTGCCGATGTT
TATCTACTTTATCATAAGTATGAATATTGAATGCAGATGGATAGTCCCCT
TGGTCAAATGGGGTTGATTTCTAAGGGACCCCAAGACAGTGAAACAGAAA
ACAAACTTGGGATGTCATGAATAAAAACTGTTTTAAAACATGCAAGAAAT
AGCGAAATACGCACCTCCAAATTTTCGACGTCTCCTGTTCGTCTTGTTCA
CGGAGTGGCCTTGTCTCGCGAGAACACGAGACTAGGCCGAGACTTGTCGA
CAATTTGGAGGTGCGTATTTCGCTACCCTTTTTTAAAGTAACTGTTTGAG
GAATGTTCTTGTAACTGTTGAATTACACGTGACTGATGAATTTATTCAAC
GATGCAAGAAATACCCTTTACCTATCCCACAAACTAGCCCGTCCGCTCCA
CCACTGTCTCGCTCTGTGAACAAATGAGTCCACCAACACTATGCTGTATT
TCAGACATAGACGAGTGCTCGACCGGAACTCACAACTGCGACAGCAATGC
AGCCTGTAGCAACACCGCGGGAAGCTTCGGCTGCAGCTGTAACAATGGTT
TCCAAGGCGACGGAACAACTTGTGCAGGTGAGAAGGTCTTCTGGTCTAGA
GGTTGCAAACAATTTTCTGAAGCGTGGGCGTTCAAAGCAAACTAGCAAAT
TATACAATGTGAATGAACAACGATAATGGTAAATAATAACCATGTCAATT
ATAAATCATGTGTATTTTTTATGATTTGTTTTCCACGAGCCATTGGTTGT
AGACATGTCACATTTGCAAGGTAGGAAGCACACACCTGCACCTCCACTGT
CTTTCCAAGATGATTCCAACACTATGCTGTATTTCAGACATAGACGAGTG
CTCTGCCGGAACCCACAACTGTGACCCGGACGCCGCCTGTAGCAACACCG
TGGGAAGTTTCAGCTGCAGTTGTAACACTGGTTTCCAAGGCGACGGCACA
ACTTGTGCAGGTGAGAGAGATTTCAGGGATAAGTCTTGCTTTGTTTTAGC
TTCCGGGGCGACGTCGCAAATTGTACATGTGACAGTGATTTCAAGCACAT
TTGGTACATATTCCAATGAAAGGAAAGTCTACTTTTTCCAAGTGTTTCGT
ATACGCCTAATCTCCAATCAGATCTATCGGTGGCAATGACAGTATCCAAA
GGGCAAAAGCAGCATTATTGGCCGAGGTGATTTTGCCCTTTGCAAACTGT
CATTGCCACCGACAGATCTGCTTGGAGATTAGTATACGCCCAACCTTGTT
CCGATACGTAAAATGGAAAGTTGAGCATGATAATGTATAAGTTTCATAAC
TGTTAAATCTGATCCATTCCTGGAATCTGCTTGTTAGGTCATGTCCTGGA
AGTAAAGATTCATTTATCTTATCAACTTGGAGACTTAACATGCATTATTC
ATGGGTACAAATGATAAGTTTGTTTTATAAAATGGCACAGAAGCCCAATC
TATGTGAAACTGTGTTAACACAGATGTGAACGAGTGTGCTGAAGGGTCTC
ACACCTGCCACGCCCGTGCGACCTGTCTGAACACACCGGGGTCCTTCTCT
TGTGCGTGTGCGGACGGTTTCCAAGGCAACGGTGTCGACTGCACAGGTGA
AACTCAAGTTGAAACATATTACCATTATGGACATTAATGTTTGGTGTTGC
ATGATATTCTGACAGACGCTTTACAGTAGTCTCCAAGCAGACCTACGAGT
TGGCAAAGTCCAGTTGGATACGGTCTTTGCAATCTATTGGGTCTGGTTGG
AGACTAGCTTTACAGACCAGGTATGGCGTATGGCGTGTGGGATTGCTTTA
CCTTCACTTAGCTTCAGATCTAGATTGTCATCATCATCATCATGTCGGAC
GGATTGTCATGATTGCCAGTTATTGAAGTTAATTGTGAACCTCTAGATCC
GGGCCACGCGGTGGTCTAAAATGGACCAATTTTACCGACGCATGTATGTT
GACGACGATAAGATGGCAGCTGTCCACGATTGGTTCACAGACATCACGCA
ATGTCTGCTGTTAACAAGAAATTATATCAATAGACCTGTGATATAAACTT
GCAGTCATGATAACACTATCATTTGACAAACCTTGACCTTTCCCCGTTGT
TTCAGACATAGAAGAGTGTTCTGCCGGAACCCACAACTGTGACCCGGACG
CCGCCTGTAGCAACACCGAGGGAGGATTCAGCTGCAGCTGTAACACTGGT
TTCCGGGGCGACGGCACAACATGTACAGGTGAGAATGATTTCATAGATTT
AAAAGTCTAACTTTACTACGTGACAAGTAGCCGGAAAACATACTTGCAGT
ATCCTAAATTCGCGTTTGATGGTTCCATTTTTGAACCAAAAAAAACGCGA
AAATAAAACCACTCCGAAATTTCAAGATTTACAGTTTTAAGATTCACAGT
TGGTCCCTTCATTACACTATCAAAAAGCAAAGATAAGGAAAAAAAGTTTT
GTTGAATTCTTTCCTGTGTCGTGAAGACGTTGACGAGTGTGCGGAGGGGT
CACACAACTGCCATGCCGACGCCACTTGCACCAACGTCGCGGGATCCTTC
AGCTGCACCTGTAACTACGGCAGCGAGGGGGACGGAACGTTCTGCACAGG
TACGTGTGCTGTAAACCACACACGAGGGTCTGCATGGGGCTCCCGACAAA
TATTTAAGCTCCCTCACACTTGTGCGTCTGTGCATGCCCGCATGAGTTGC
GTATACTAACATGTTTTTGGTTTAGGTTACGTTTGCAGCCGAGGAAGTCA
TCTCTTTAACTATTTAACTAAGCTGTGCAACGGTGGGTCAAAGTAGNACA
CGAGGGCCTGCATGGGGCTCCCGACAAATATTTAAGCTCCCTCACACTTG
TGCGTCTGTGCATGCCCGCATGAGTTGCGTATACTAACATGTTTTTGGTT
TAGGTTACGTTTGCAGCCGAGGAAGTCATCTCTTTAACTATTTAACTAAG
CTGTGCAACGGTGGGTCAAAGTAGAAAACAACTTCTTCCCAGCAAACTTT
ACTTAAACCCACAAATGACAATGCGCAACTCATACGTACTTGATTATACG
CAAAAGGGTCCCATTTCACAAGACGGCGATTTCGCTACGATCTTGGCTGG
GACCTTAATTGGATGTGTACAAGAGAAGCTGTGTAGTATTGTTTTATTGA
GACGTGTAATGAAACCAATGTATATTCTTATCGAAACGCGTGATAAAACC
GGCGGATGCTAATTGTGAAATGTGAAATGTGTTACTGACTAAAATCAGTG
TATTATTTGTCTTGAAGTGTCTTGAAGTTTGTAATGAAACCAATGTATAT
TTTTTCGTCGAAGTGTTATATATATATTTCTTTGCTGAAGCATGTGATAA
AACCGATATATATTTGTCTTATTGATGTGTGTACTAAGTCCAAAACATAG
TCTGTTCTTCTTGTTGTGTTACAACAACAGACATCTGTTCGGACACGTGG
ACGTACTACGAGCAGTCGTGCTACCTGAGTTCGCTGGAGATCGCCGCCGT
CTACTCCCGTGACGACTACGACCGGACGTCGTGGCCCAGCGCACGGACCA
TGTGCCAGGCGCTGCAGGGGGACCTAGCCGTCACTCCGGAGTCCGCGGAA
CAGGTCTTGTTCTCTAGCTAA Coding sequence (CDS) from alignment at Sc0000051:348293..354313+ >Blg01344.0 ID=Blg01344.0|Name=Blg01344.0|organism=Branchiostoma lanceolatum|type=CDS|length=1071bp|location=Sequence derived from alignment at Sc0000051:348293..354313+ (Branchiostoma lanceolatum)
ATGGCGAACAAGGCCGCGGACATAGACGAGTGCTCGACCGGAAGCCACAA
CTGCGACACCAACGCCGCCTGTATCAACACCGTTGGTGGCTTCGGGTGCA
GCTGTAACACTGGCTTCCGGGGCAACGGAACAACTTGTGCAGATGTTGAT
GAGTGTACCGATGGGACCCACGACTGTCACGTGACCGCCGCCTGCCAGAA
CACACACGGGTCATTCACCTGCACCTGTCGTGACGGTTACCAAGGGAACG
GCGTCACATGCACAGACATAGACGAGTGCTCGACCGGAACTCACAACTGC
GACAGCAATGCAGCCTGTAGCAACACCGCGGGAAGCTTCGGCTGCAGCTG
TAACAATGGTTTCCAAGGCGACGGAACAACTTGTGCAGACATAGACGAGT
GCTCTGCCGGAACCCACAACTGTGACCCGGACGCCGCCTGTAGCAACACC
GTGGGAAGTTTCAGCTGCAGTTGTAACACTGGTTTCCAAGGCGACGGCAC
AACTTGTGCAGATGTGAACGAGTGTGCTGAAGGGTCTCACACCTGCCACG
CCCGTGCGACCTGTCTGAACACACCGGGGTCCTTCTCTTGTGCGTGTGCG
GACGGTTTCCAAGGCAACGGTGTCGACTGCACAGACATAGAAGAGTGTTC
TGCCGGAACCCACAACTGTGACCCGGACGCCGCCTGTAGCAACACCGAGG
GAGGATTCAGCTGCAGCTGTAACACTGGTTTCCGGGGCGACGGCACAACA
TGTACAGACGTTGACGAGTGTGCGGAGGGGTCACACAACTGCCATGCCGA
CGCCACTTGCACCAACGTCGCGGGATCCTTCAGCTGCACCTGTAACTACG
GCAGCGAGGGGGACGGAACGTTCTGCACAGACATCTGTTCGGACACGTGG
ACGTACTACGAGCAGTCGTGCTACCTGAGTTCGCTGGAGATCGCCGCCGT
CTACTCCCGTGACGACTACGACCGGACGTCGTGGCCCAGCGCACGGACCA
TGTGCCAGGCGCTGCAGGGGGACCTAGCCGTCACTCCGGAGTCCGCGGAA
CAGGTCTTGTTCTCTAGCTAA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg01344.0-exon-Sc0000051-1570713199:348293..348311 | Blg01344.0-exon-Sc0000051-1570713199:348293..348311 | Branchiostoma lanceolatum | exon |
| Blg01344.0-exon-Sc0000051-1570713199:349795..349917 | Blg01344.0-exon-Sc0000051-1570713199:349795..349917 | Branchiostoma lanceolatum | exon |
| Blg01344.0-exon-Sc0000051-1570713199:350260..350382 | Blg01344.0-exon-Sc0000051-1570713199:350260..350382 | Branchiostoma lanceolatum | exon |
| Blg01344.0-exon-Sc0000051-1570713199:351147..351269 | Blg01344.0-exon-Sc0000051-1570713199:351147..351269 | Branchiostoma lanceolatum | exon |
| Blg01344.0-exon-Sc0000051-1570713199:351530..351652 | Blg01344.0-exon-Sc0000051-1570713199:351530..351652 | Branchiostoma lanceolatum | exon |
| Blg01344.0-exon-Sc0000051-1570713199:352166..352288 | Blg01344.0-exon-Sc0000051-1570713199:352166..352288 | Branchiostoma lanceolatum | exon |
| Blg01344.0-exon-Sc0000051-1570713199:352798..352920 | Blg01344.0-exon-Sc0000051-1570713199:352798..352920 | Branchiostoma lanceolatum | exon |
| Blg01344.0-exon-Sc0000051-1570713199:353169..353291 | Blg01344.0-exon-Sc0000051-1570713199:353169..353291 | Branchiostoma lanceolatum | exon |
| Blg01344.0-exon-Sc0000051-1570713199:354123..354313 | Blg01344.0-exon-Sc0000051-1570713199:354123..354313 | Branchiostoma lanceolatum | exon |
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000051 | genome | Sc0000051:348293..354313 + |
Properties
| Property Name | Value |
|---|
| GeneID | Blg01344 |
|
