Blg01039.3 (mRNA) - B. lanceolatum

Overview
NameBlg01039.3
Unique NameBlg01039.3
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



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Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000003:2246936..2248374+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg01039.3 ID=Blg01039.3|Name=Blg01039.3|organism=Branchiostoma lanceolatum|type=mRNA|length=1439bp|location=Sequence derived from alignment at Sc0000003:2246936..2248374+ (Branchiostoma lanceolatum)
CTGGCCTGGCTTATGAAAAATACTGAATTTAAATGTCCAACAATAGAAAA
TAATTAGATTGAAAGATTTATGCAATTTTCCTTAACCAGACTTTTTCAGA
ACTTGATCTTCAGATATCTGCAAAACGTAAGTACACATTAGAACGTCAAT
GATAATCTTTTTCAAGTGCCATTTGTCTTTCAGTACTGGCTGCATATCTT
GACTTCTTCTTTTATAAACCATTATTGTTATAATTGTATCATGGCAATTA
TCACAAAGATGATTTGTTTCCATATCATCTAAGAAGAAGCTGAACAGTCT
GACCTGTGCATGCTTTACAGTTCACAACTGTAGTGGTCCAATTGCAACTT
CAATGTACATGAGAAGAGCATTTTTTTTCTCTCTCTGATTCAGTCTGAAG
TGGTTAAGAAGACTTTATTTTTATATCATCCTGCAGCGCTCACGTATCCA
GATCTGGCTGTACGAGCAGACCAACATGAGAATCGAGGGACACATCATCG
TAAGTTGGGGAACCTCCAGATAGATCATAAACTCATTCCAATAATGACAT
TGACAAATTATGTGCTACCAACCATTTAGCAACAGCCACCCCCCGCACAC
ACACCCAACTACTGCTACATGTAGGTACAACAGTATCATACCATTATCAA
TTAACATTAGTATGAGTTGATGAAGCTTACCCATTTATGTGAACCACAGC
AATCATTTTCAGTTAATTTTATTCCTTCAGTTTGTCTTTCCCTGTAATGT
TTTTGCCTCTCTCCCTTGATTTCATTGTAATGTCTTTTCTTTGTTAGCAA
CAGGCTTGGTCAGCCCTGGCTGCGTGTGCTGAACAGCCAAGGCAATGAAT
GAATAACTTTTGCCTCTCCTCGCAGGGTTTTGATGAGTACATGAACCTGG
TTCTGGACGATGCTGAGGAGATTCACCTCAAGACAAAGAACAGGAAGCCG
CTGGGTAAGGAACCAAGTCTTCTGTGTCTTTGATTTATTTCCTCCACTCT
TCACGTTTTCTCCTTGTTTTCTCTTTCTTCACTCCATCTTTTCTATCTCT
TCATCCCACCTTACTGGTCACTCTTTCATACTTAGTATTCTCCAAACTAA
GAAGCTTGGCAGAGAGCAACATACATGTGAATGTTTCCAACTAACTTTCT
TTTTGTATTTTTCTCATTACTTCTCTGAAAAAAGGTGATAAGTTGCTTCT
GTCATTTTCATACTACATGTACCTCTATTATCTTCTTGGTAGACCTCTGC
CTGTCACAAGCAATGATGTGCTTTTATTTGTTCACCAACAGTTTTGTGTA
GACTGTAGATGATTATTTCTTGTGTTTTTTTGTTCTCTTTAAAGATATAA
ACATTTATTTTTCAGGTCGGATCCTTCTGAAAGGAGACAACATCACCTTG
ATACAGAGTGTCAACACACCTTGATACAGAGTGTGGACA

Coding sequence (CDS) from alignment at Sc0000003:2246936..2248374+

>Blg01039.3 ID=Blg01039.3|Name=Blg01039.3|organism=Branchiostoma lanceolatum|type=CDS|length=258bp|location=Sequence derived from alignment at Sc0000003:2246936..2248374+ (Branchiostoma lanceolatum)
ATGCAATTTTCCTTAACCAGACTTTTTCAGAACTTGATCTTCAGATATCT
GCAAAACCGCTCACGTATCCAGATCTGGCTGTACGAGCAGACCAACATGA
GAATCGAGGGACACATCATCGGTTTTGATGAGTACATGAACCTGGTTCTG
GACGATGCTGAGGAGATTCACCTCAAGACAAAGAACAGGAAGCCGCTGGG
TCGGATCCTTCTGAAAGGAGACAACATCACCTTGATACAGAGTGTCAACA
CACCTTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg01039.3Blg01039.3-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg01039.3-exon-Sc0000003-1570713199:2246936..2247061Blg01039.3-exon-Sc0000003-1570713199:2246936..2247061Branchiostoma lanceolatumexon
Blg01039.3-exon-Sc0000003-1570713199:2247372..2247434Blg01039.3-exon-Sc0000003-1570713199:2247372..2247434Branchiostoma lanceolatumexon
Blg01039.3-exon-Sc0000003-1570713199:2247811..2247889Blg01039.3-exon-Sc0000003-1570713199:2247811..2247889Branchiostoma lanceolatumexon
Blg01039.3-exon-Sc0000003-1570713199:2248301..2248374Blg01039.3-exon-Sc0000003-1570713199:2248301..2248374Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000003genomeSc0000003:2246936..2248374 +
Properties
Property NameValue
GeneIDBlg01039