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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000003:4941078..4948250- Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg01023.5 ID=Blg01023.5|Name=Blg01023.5|organism=Branchiostoma lanceolatum|type=mRNA|length=7173bp|location=Sequence derived from alignment at Sc0000003:4941078..4948250- (Branchiostoma lanceolatum)
GCTGTGTCTTTTGAGTGGTGATATTTCAACGTATTTTACCCCTACTGTTG
AAATGGGTTTTCCAGGAAGTTACTTGGGTGAGAGACCATGTGCTGATCAG
TGATCACAGACGATATTGCGACATTTGTGGATCGATCAGCCGGCTATACT
TTGACCAGCTGTTTATCGATTAACCGGATGTAAGTGTCGATTGCATCGTT
CAGTTTTATTTCAATATTTTGTGCTGAACGTAGCTGACGGTGCTGTGATA
TTACTCAGTGCATGATTCAATACTGTAGCTATAGGTAAGTTAAAGTTCAC
AGATTTTTAAATGCCCTGAAATCTTTTGTCTTTTGTCACTTACAATACGT
ATGTTGAAATAATTTTGTTTCAGAGATTGATCAAGATATAATTACCATAT
GATAGCTAACTATTACAGCCTTACACAATGCTCAAAAGCAACAATCTAGA
CAGTGTGCCATATTCTCTACTCATATTCAACAGTTTTGTATACTGTAAAA
CGTTAGCGTAATGGAGAGTTATAAAACGTATTTTCAATAAAGAAATAAAC
TTAGAAAAGTTGGAAAATATAAGGAATACTAAAGGCACAGTTTAGAGAGG
GCGAATCAGTTATGTCAATTGAGTCGCGATTGGCTACTTAACTTGATAAC
TTGATAGAAATGCAATAACTGATATATTCATGTATATTCCTTTCAGTATC
ATATAACATGGCAGACACTGGTGACTCTAAGGGGGCGACGTCTGAATCTG
CTGCTGCGGAATCGGATGCTATGGACTGTCCCAGCCTGGAGGGTTCCGAT
GACTCGGACTGGGAGGAATGCGACGACGACGAATCAGGAGGCAGCGTTCT
CGATCTGTTCAGCAAGGAGGAACTCTCATCAGCTGAAGACGTGTTTCAGC
ACTGCAAAACAGTACATCAGTTTGATGTGCAAAAATTTGTTGTCAAAAAT
AGTGAGTATTATACCTGATTTTCATATCCTGGATAATCATTAAGAGCAAC
AATGTAAATATTCTGGGAATTTCAATCATAAAGTTGTTAGTTGGAATGAC
CATTATGTACTTGTAAGCTGTTATTCTGAATCAAACTTGCTGTTTGAACA
TCAAACAGCTGATCTTGTTCTTAGGTTACTTCCTTTTGTTTAATTGCTAT
AAATAGTATAATTTGATGACAAGCATTTAACGAGTGCAAAATTCCTTCGT
TTTTCTTGTCTCTTTGATACTGGTATTAACTTTAATGTTGTCTGTTCCAT
TTTTGTACTTCATTTCATTGCATTTTTCTTGTTGCAGAGTTGGACATGTA
CGGGTACATCAAGTTCATCAACTACGTACGCAGCAAGGTAAAACAACTTT
ATGCGTATCGATCACTTCTGTCATTTTTCAGAGTAAATAGAACACTTATC
TACGCTAAAAATAGTTACTCAAGCCACTGGATGAAATTTTGAAACAGTCA
GACGTTTCAGACAGCATCCGCTGTCTTTCGTCAGTGAATAACGATAGGAC
TGGAAAACCAGATTTTGTACCAAAACTCTGAATAGATATGTTATTGAGTT
TTGGTATGAAATCTGGTTTTCCAGTCCTATCGTTAGTCACTGACGAAAGA
CAGTGGATGCTGTCTGAAACGTCTAATAATAACTGTTTCAAAATTTTATC
CAGTTGCTTGAGTAACTATTTTTGGCGTACCTTACTACCTGAATGTCTAA
CCTTCATCAACGCAGTAGAACACTTGTCTGATTCCTCCACATAGAATTGA
AAACAGAATATGTGTTCATTTGATAGGAATACCGATGATTGTCCTTTTCA
GAACCCCTCTCCCACAGATATTAGTGATTCTTGCCAAGCTAAAGAGGCAC
CCTGGGATAGTGACCAGTACTTACAACCAGTCCTACAAGATGACCCCCTT
CTCTTCTATGGTGAGATCATGTACTTCTAGTAATCACTAACTCTGTTTAC
ATTAGTGACATCGATACCCAAGTGGTTAGGCTAGTGGACACCCGACAGGT
CATAATCCTGGCATTCCTGGCTAAACATTGTACCCTTTGGAAAGACACTT
TAAATGAATTTCCTCACCTCACCTAAGTTTAAAAATGGGTACCTGACATC
AGTTGGGGTGGTAGATTGGTGCACATGATGGAAGGAGAGGTATGACCGTA
TGGGCTTTGTCTTGCCCTTAGGGCTAGGGCTCTGGATAACAACCTACTGA
TCCTACAGCTTCTCAAAGGCTATGGTACTTTTTGTTGCTGTATTTACCTT
AATTTTTTCAAAACTGTATGTTTAAGGTACATGTATGTTTTGTGAAAGAA
TAAATCAAATGTAGTACCAACACACAAGGCAAGTTATTGAAGGAAAGAAG
AAAAAAGCAACTACCACAGTCATGAGTTAACAGTCTGGACTGGTGACATT
ACCCACAGATGTGGAGGAGTGGACGACTCAGTCTCCTGTTGCCATGGAGA
CAGAAGACAGTGACATCACATTGCCAGGACAACAGTACAGAGCTCTGCTG
GAGAGACTGCACCAAGCTGAGGCTAGGTCAGAGGTCACTGAGGGGCAGCT
GCATGATGCGCTGAAGGACATTGATCGGCTCAGGTATGTTAACCCTCAAC
CTGCCGAGGTAGCTATAGCATTTTGGCACCAAATTTGTATCTCTTATGGG
GTTAGATAGCCGATAGAAGGTTAACACTGGAGGACTTGAATTCATTAGAA
ATTGAACTACTTACTGTAGGCTAGGTCTCAGATGTATGTGTGTGTTTGTA
GTGTGTGTGTATTCAAAACATTCCATCCCTTCAGCCAATGCTAATATTGT
GCATGTCTGCATACATGCGTACCTGCAAGTGAAGTCCTTATTTGCATACT
TGATAAGAAAATAAGTATTCCTAGTGGTGAATGATTGGAATTTCATTCTT
GCAGCATTTATGTATTACAGTTCATGTAATTTTGTATCAACATATAAATC
TTCAATTCTATATCAACAGGCAAACAGCAAAGAGCTTCATCTTGTCAGAC
CAGAATGCCTTGCGTCCTTCCCATGGTGCAGTAGCACAGTTGAGGGAAGA
TGAAGATGCGGCTTACTTCAGTTCCTACTCCCACTTCAGTATACACATGG
ACATGCTGCAGGTGTGCCCTTGCAGAAACTGTAAAATTTTCTTACGGTTC
TGTTTTGCTGTTTTAGTATCAAATAAAATATATAGTGCTTATTTGATGTT
TAAGATTACATCATTTCACAGAACATGAATGTTCTGGGCTTGCAAGTAAA
TCTATGGTGTACATTGTAGACATAAGAAGAAATATTGTGCCTTACAAATT
GTCTTTATCTTGGCCAGGACAAGGTCCGGACAGAGAGTTACAGGGATTTC
ATCCTGACCAACCAGCATCTTTTCAAGGACAAGGTATTACTAGTCTCTTC
AGAACCTGATTATTATGGTAAAAGAAGGCTGATGCTGTATTGTAGAGCAG
AACAAATACATGTACTAGTAGTTTTCTGCTACCTTATCTTTGCTGTTTCA
GAACAATTCTTCAGACAATGTGAAAACAAAGGTACATTGTTGTCAGCCAA
ACTTCATGACAAAGCCTGATTGTGCTGGAATTTGTGGTTGCCAACAATCC
AAACTAAAGTGTGGTGCAACATTGCTAGTATATGGTAGGACTTAGGAGGG
GAGTTGCTTGTTTACATATAAGTTATCAAGTCAGACAATTGACGCAAAAA
AATATGTTGTTTTCTTTGGTGAAAAATTGATGTTTACAGTGAAACCTGAA
TGTGTCCCCAGGTTGTTCTGGATGTTGGGTGTGGTACAGGGATTCTCTCC
ATGTTTGCTGCCAGAGCTGGAGCTAGTCAGGTGATCGCTGTGGACCAATC
AGAGATCATCTACAAAGCCATGGATATTGTCAGGTATTACATGTAGCTGT
CATTGTGTGTGTCAAACATTTTTTGTTTTTTTCCGTCCAAAATTTGTGTT
TATTCTTTTTGTTCTGAAATCCATAGATTATTATTGCTTTGTCACGTTGA
CAACAAGAGTTTTTTCTCTGTCCCTCCAGGGAAAACCATCTAGATCACAT
CATCAAGTTGGTGAAAGGTCGGGTGGAGGACATTCAACTACCAGTTGAGA
AGGTTGACGTTATCATCTCTGAGTGGATGGTGAGTTGATGTATTACTGTT
GGTTAAATATGGTTTTAAATATCTCGGTCTACGTAATGTTACCCCAATCT
GTGTAACACCCCCTTTTCGCTAGAGACTGTGACTGCTGAGCGACCCAAGA
TTTGACAGGTCGCTAAACAAATTTCATAGACAAAGAACAAATCTTTTTAC
ATTTTGTGGATTTTGTGGTCTTTCAAACCATACTTTGCATATGAAATACG
GTCACACAAATCAAATTTTATCCAGCATTTGCCGTTTAGTGGAAAAGGGG
TCCAAGCAAACTCTATTGGTTATGATAACTTATTACTACACTAGCATATG
TAAGTATAGGGTGGATTGGTAGCTAGTACTTACACATGTGTTTGTATTTT
ACCAGGGTTATTTCCTGCTGTTTGAGTCCATGTTGGACACAGTCCTGTAC
GCTCGGGATCGCTGGCTGGCACCCGATGGCTCAGGTGAGCAATTTTTTTT
TCTAATTCTAATCAGTACATAGATCTGTATGGATGCTATGAAAGCTCTAC
CCAACAGTATTATACCGGTAGTAAAGACTTTAGGATTGCTCTGTGGAAAT
GATATTTCATGAAGACAGTATGCTTTTAGTAGAATTCTAAAACAATTAGT
ATTAGAGTAAAACTCTCAAACTACTGTTCTTTTATTTTCATCCCTATTGT
ACAGGGAGATGGTCAAAAATATGCAAAGTGACAAGAATAGAATAATGGGA
CTAGGACCAACTGTGAACCATCAATGTAGAAACACCTCTAGATAATGTTT
CACATACATATTTATTTGTAATTTTCTGTCTTTCCGTGTGCTTCTTGTAA
CATCTAAGGTGGATATACCTTTATTCCATACACTTTTGCAGTTTACCCTG
ACAGATGTACACTCAGTCTGGTTGCCATTGGTAACGCAAAGATGCACAGC
AACCGAGTTGCATTCTGGGACGACGTCTACGGCTTCAAGATGACCTGCAT
GAGGTCAGAGGTCACCAGGGAGGGGTCGGTTGAGGAGATTGACCCAGAAA
CTGTGATGTCAGAGCCTTCTCTAATCAAGGTGAACAACAAACTGCAATTT
AACCTTGGAGAAACTCCTGTACATGCATCCTTTTGTTGCTATATTTTACA
TTGACACTATGATTGAATACTCTAGCCTCCATCGTACAGTATAGACTCTA
CAGTACAGGTCAGGCTTTTTTTGCTATAATGTGCTTTTTTTTTGTTATGT
ACTAGTTTCGATTGTACTCGGTAGGAGATGGCTTACAAGAAACCTCAGGT
ACAATCATCAGAGCTAATATACATAGTAGAAGTAGGGTAGGAGTGACCAA
CACTGTTGTAGGGATCCCTTCCAAGCAGCTCTGTCCAGTGGGTCCACGCT
GGTTATAAGGCCGCACACCATTGAAATGTCCCTCCTGACACACTCCAACC
AAGATACAACATAAAGAAACACATTATAAGCACGAAAACAGCCTTACCAT
ACAGCCTGGTAAGGAGGCTAGAGCACTCCTTCTTTTGAATAGTTCTTTAT
GTCTGACATCACAATCATGGTTTTCTCACAGATGGTGGACTGCTGCTCGG
TGTCAGTAGCTGAGTTGGATTTTACAGCTGACTTCAGTTTAACAGCCACC
AGAGATGGGACATGCACGGTTAGTGGGTTATTAGCATCTGCACAGAGATA
CATGATGAGAAGCAGTTTTGTATCTGATAGCTAATCAAATTAAAACAGTC
ATGATTGCATTTGCATTTGCATTTTGCAAAATGAGGGAGGATGGGAAATA
TGAGGATCGTGTCATGTATTTCACTGTTATTTTTTTTCTTTTAAGAAATA
TGATTTATTGAGTAAAGAATAGGACCTAGTATGAAAATGGCTTTCAGTGA
AATCTACTTTTAAAGATTACATTTGCATCAAAACTTTTTCACTGCTTCCT
TTGCAAAGGGTATTGGTGGCTACTTTGACATCATGTTTGAGAAAAACTGC
AACAACAAGGTGAGTTTGCTATTGAACCTCAGAGCGACAGGAAATCTTTG
TTCTTAGGATGAATGGATTTGTTGAATACGGTTTAATGAATAACTGCACT
TTCTAGCCTCGTTTGAAATTTCATTGCCTCTTCTGCATGTTTTGACAAAG
TTTTATATCAAAATTTAGTGGAGTTACTGACTTATTTTTCCTTCTCAGGT
GTACTTCTCCACTGCCCCCAACTGTATGAAAACACACTGGAAACAAACTC
TGTTTCTACTGGAGAAACCAGTGGAGCTGAAACAAGGTATTTGTTTCTTT
TAGATAGATTTCATGACATAGTGGTTTATCTTACGTTGTCTCTACCTTTA
TAACATTGGCCATAAAGATTACAGAATTTTTATGAGCTAGATCCAAGACT
GGTTGTGGAAAGAGTAGCACAATTGTTTGTTTTCTGGCAGATACAATAAT
ATGGCTCATTTCCAAAGATGTCAGATAACGAAATAATGTTGCTTTTACAT
ATGGATGTCATAATAGCAATGTGGTATCAAATATGTTATCACAGTTTTCT
TAAAAACAATGTACAGTGTATCTATGTTTTTTACTCTCATGTTTTTGTTA
GCCATGTTTTTCACAGAGTTGAGCTGACAGATGCATGATTGTCGAAAAAA
AAATCTTAACTTTTAGTATCTTTTTTTTCTTTCTTACAGGGGACCTTCTC
AGTGGAAAGATCTCTGTGAAGAAGAATAAGAAAGATCCAAGAGCTCTCGT
AGTTAGAATAGAAATCACAAACTCTGGGCAAATGTTAGATTTCCAGTTGC
AATAACCCTTCAGTCTTTTTAATTTCGAAATAGTAGTAAACTCACCCTCA
GCTATCAATAAAAGCATTTTCTCCTATTTGAAATATTTTCCCCATTGTTG
TTGTGAGTTGACATATGACAATGATGTGTTAGAAAAAAGTGCCAACAAAG
AACATAATTATATGTTATACTTTAGATCCCAATTTCAAGAAAGGTAACCA
TACATTTGTCATGATGATATCAATTTCTAATCCACTGGGGCTTGTGTCCC
ATGTGTTATAGTTTAGAATAGCT Coding sequence (CDS) from alignment at Sc0000003:4941078..4948250- >Blg01023.5 ID=Blg01023.5|Name=Blg01023.5|organism=Branchiostoma lanceolatum|type=CDS|length=1617bp|location=Sequence derived from alignment at Sc0000003:4941078..4948250- (Branchiostoma lanceolatum)
ATGGCAGACACTGGTGACTCTAAGGGGGCGACGTCTGAATCTGCTGCTGC
GGAATCGGATGCTATGGACTGTCCCAGCCTGGAGGGTTCCGATGACTCGG
ACTGGGAGGAATGCGACGACGACGAATCAGGAGGCAGCGTTCTCGATCTG
TTCAGCAAGGAGGAACTCTCATCAGCTGAAGACGTGTTTCAGCACTGCAA
AACAGTACATCAGTTTGATGTGCAAAAATTTGTTGTCAAAAATAAGTTGG
ACATGTACGGGTACATCAAGTTCATCAACTACGTACGCAGCAAGAACCCC
TCTCCCACAGATATTAGTGATTCTTGCCAAGCTAAAGAGGCACCCTGGGA
TAGTGACCAGTACTTACAACCAGTCCTACAAGATGACCCCCTTCTCTTCT
ATGATGTGGAGGAGTGGACGACTCAGTCTCCTGTTGCCATGGAGACAGAA
GACAGTGACATCACATTGCCAGGACAACAGTACAGAGCTCTGCTGGAGAG
ACTGCACCAAGCTGAGGCTAGGTCAGAGGTCACTGAGGGGCAGCTGCATG
ATGCGCTGAAGGACATTGATCGGCTCAGGCAAACAGCAAAGAGCTTCATC
TTGTCAGACCAGAATGCCTTGCGTCCTTCCCATGGTGCAGTAGCACAGTT
GAGGGAAGATGAAGATGCGGCTTACTTCAGTTCCTACTCCCACTTCAGTA
TACACATGGACATGCTGCAGGACAAGGTCCGGACAGAGAGTTACAGGGAT
TTCATCCTGACCAACCAGCATCTTTTCAAGGACAAGGTTGTTCTGGATGT
TGGGTGTGGTACAGGGATTCTCTCCATGTTTGCTGCCAGAGCTGGAGCTA
GTCAGGTGATCGCTGTGGACCAATCAGAGATCATCTACAAAGCCATGGAT
ATTGTCAGGGAAAACCATCTAGATCACATCATCAAGTTGGTGAAAGGTCG
GGTGGAGGACATTCAACTACCAGTTGAGAAGGTTGACGTTATCATCTCTG
AGTGGATGGGTTATTTCCTGCTGTTTGAGTCCATGTTGGACACAGTCCTG
TACGCTCGGGATCGCTGGCTGGCACCCGATGGCTCAGTTTACCCTGACAG
ATGTACACTCAGTCTGGTTGCCATTGGTAACGCAAAGATGCACAGCAACC
GAGTTGCATTCTGGGACGACGTCTACGGCTTCAAGATGACCTGCATGAGG
TCAGAGGTCACCAGGGAGGGGTCGGTTGAGGAGATTGACCCAGAAACTGT
GATGTCAGAGCCTTCTCTAATCAAGATGGTGGACTGCTGCTCGGTGTCAG
TAGCTGAGTTGGATTTTACAGCTGACTTCAGTTTAACAGCCACCAGAGAT
GGGACATGCACGGGTATTGGTGGCTACTTTGACATCATGTTTGAGAAAAA
CTGCAACAACAAGGTGTACTTCTCCACTGCCCCCAACTGTATGAAAACAC
ACTGGAAACAAACTCTGTTTCTACTGGAGAAACCAGTGGAGCTGAAACAA
GGGGACCTTCTCAGTGGAAAGATCTCTGTGAAGAAGAATAAGAAAGATCC
AAGAGCTCTCGTAGTTAGAATAGAAATCACAAACTCTGGGCAAATGTTAG
ATTTCCAGTTGCAATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg01023.5-exon-Sc0000003-1570713199:4948072..4948250 | Blg01023.5-exon-Sc0000003-1570713199:4948072..4948250 | Branchiostoma lanceolatum | exon |
| Blg01023.5-exon-Sc0000003-1570713199:4947300..4947554 | Blg01023.5-exon-Sc0000003-1570713199:4947300..4947554 | Branchiostoma lanceolatum | exon |
| Blg01023.5-exon-Sc0000003-1570713199:4946914..4946963 | Blg01023.5-exon-Sc0000003-1570713199:4946914..4946963 | Branchiostoma lanceolatum | exon |
| Blg01023.5-exon-Sc0000003-1570713199:4946341..4946449 | Blg01023.5-exon-Sc0000003-1570713199:4946341..4946449 | Branchiostoma lanceolatum | exon |
| Blg01023.5-exon-Sc0000003-1570713199:4945668..4945842 | Blg01023.5-exon-Sc0000003-1570713199:4945668..4945842 | Branchiostoma lanceolatum | exon |
| Blg01023.5-exon-Sc0000003-1570713199:4945140..4945281 | Blg01023.5-exon-Sc0000003-1570713199:4945140..4945281 | Branchiostoma lanceolatum | exon |
| Blg01023.5-exon-Sc0000003-1570713199:4944868..4944933 | Blg01023.5-exon-Sc0000003-1570713199:4944868..4944933 | Branchiostoma lanceolatum | exon |
| Blg01023.5-exon-Sc0000003-1570713199:4944368..4944489 | Blg01023.5-exon-Sc0000003-1570713199:4944368..4944489 | Branchiostoma lanceolatum | exon |
| Blg01023.5-exon-Sc0000003-1570713199:4944122..4944221 | Blg01023.5-exon-Sc0000003-1570713199:4944122..4944221 | Branchiostoma lanceolatum | exon |
| Blg01023.5-exon-Sc0000003-1570713199:4943667..4943745 | Blg01023.5-exon-Sc0000003-1570713199:4943667..4943745 | Branchiostoma lanceolatum | exon |
| Blg01023.5-exon-Sc0000003-1570713199:4943072..4943259 | Blg01023.5-exon-Sc0000003-1570713199:4943072..4943259 | Branchiostoma lanceolatum | exon |
| Blg01023.5-exon-Sc0000003-1570713199:4942483..4942569 | Blg01023.5-exon-Sc0000003-1570713199:4942483..4942569 | Branchiostoma lanceolatum | exon |
| Blg01023.5-exon-Sc0000003-1570713199:4942142..4942192 | Blg01023.5-exon-Sc0000003-1570713199:4942142..4942192 | Branchiostoma lanceolatum | exon |
| Blg01023.5-exon-Sc0000003-1570713199:4941865..4941952 | Blg01023.5-exon-Sc0000003-1570713199:4941865..4941952 | Branchiostoma lanceolatum | exon |
| Blg01023.5-exon-Sc0000003-1570713199:4941078..4941461 | Blg01023.5-exon-Sc0000003-1570713199:4941078..4941461 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000003 | genome | Sc0000003:4941078..4948250 - |
Properties
| Property Name | Value |
|---|
| GeneID | Blg01023 |
|
