BlTCONS00160035 (mRNA) - B. lanceolatum

Overview
NameBlTCONS00160035
Unique NameBlTCONS00160035
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



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Sequence
The following sequences are available for this feature:

mRNA from alignment at xpSc0039740:15436..16579+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>BlTCONS00160035 ID=BlTCONS00160035|Name=BlTCONS00160035|organism=Branchiostoma lanceolatum|type=mRNA|length=1144bp|location=Sequence derived from alignment at xpSc0039740:15436..16579+ (Branchiostoma lanceolatum)
CGGTACGGGTGTGGTCACCATGGAAACTGGGACATCCAGCCATTCTTTGG
ACGAACTGCAGCCGGCAATATGCTATTGTCAGCTGCAATCTTGTTCAGCG
GGGCAACTGCAACAAAAGTGCTCAGAGTATTGTCGCACATGGGCGTAGCT
GTGATCTCTGTCCGTTCCTTCTTTCGCCACCAAAAGCAAGTGCTATTCAC
AGCTGTGGAGCGCCTGTGGGGGGAGCGGCAGCTCTCCATGCTGAACGTTC
TACAAGCAGAGGGACAACCTATTGTCTGTGGTGGTGATGGCAGGGCGGAT
ACTCCGGGCCACTGTGCCAAATATGGTACATATACCACGATGGAGCTACG
GAAGACAGCCATCATCGATGTGCAACTTGTGCAGGTATGTTGCATGCAAT
ATATCCTCCTGGGATACTTGCTTCATATTGATAATTGACTCTTTGTTCAA
AGTTGCCGACCATGTGAAGTTGATCTGTTTCTTGTACCAATTTTAGATAC
CAACTAGTTTGACCAGTCCAGTGTAAATAAACGTGTGTACTGTAATAGCT
GATATGTTCTTGAGACTATCTAATGCCTATGACTGAATATTTTTTGTTTT
AGAGCAATGAAGTGGGAGGTAGCTACCATATGGAGCAAGAGGGGCTGCGA
CGGTCCTTGGCAAAGGTAGAAAACTATGTGGATGTAGGAACCCTTGTCAC
AGACCGCCATCTTGGAATTAACAAGATGGTGAGAGAGGACTACCCCCACA
TCACACATTTCTTCGACATATGGCATGTTGCTAAAGGTAAGTACAACTTG
TTCTAGGATGTTTATTACTTCAACTGTGAGACATGCATGAGAGATTGTGC
ACTTCATGTTTTGATACAGGTCTCTGGCCTTTTGTGTATGTGTGTGTGTG
TGTGTGTGTGTGTGTGTCTGTGTGTGTGTGTGTGTGTGTGTGCCCGTGCG
CGTTTTTGTTTGTGTGTTGAGGAAAGGACATGTTTTTTTTTTCCTGAATA
GCAATTTATTACATTACATGCATTGGGTACAAGGTTCTTAGACCTAATAT
CATTTCACATATATGTTTATTCAGGTGTCAAGAAGAAGCTTCAAAATCTA
GCCAAGTTGAGGGACGGTCAGGCCCTGAAGCCTTGGATTTCTAG

Coding sequence (CDS) from alignment at xpSc0039740:15436..16579+

>BlTCONS00160035 ID=BlTCONS00160035|Name=BlTCONS00160035|organism=Branchiostoma lanceolatum|type=CDS|length=636bp|location=Sequence derived from alignment at xpSc0039740:15436..16579+ (Branchiostoma lanceolatum)
CGGTACGGGTGTGGTCACCATGGAAACTGGGACATCCAGCCATTCTTTGG
ACGAACTGCAGCCGGCAATATGCTATTGTCAGCTGCAATCTTGTTCAGCG
GGGCAACTGCAACAAAAGTGCTCAGAGTATTGTCGCACATGGGCGTAGCT
GTGATCTCTGTCCGTTCCTTCTTTCGCCACCAAAAGCAAGTGCTATTCAC
AGCTGTGGAGCGCCTGTGGGGGGAGCGGCAGCTCTCCATGCTGAACGTTC
TACAAGCAGAGGGACAACCTATTGTCTGTGGTGGTGATGGCAGGGCGGAT
ACTCCGGGCCACTGTGCCAAATATGGTACATATACCACGATGGAGCTACG
GAAGACAGCCATCATCGATGTGCAACTTGTGCAGAGCAATGAAGTGGGAG
GTAGCTACCATATGGAGCAAGAGGGGCTGCGACGGTCCTTGGCAAAGGTA
GAAAACTATGTGGATGTAGGAACCCTTGTCACAGACCGCCATCTTGGAAT
TAACAAGATGGTGAGAGAGGACTACCCCCACATCACACATTTCTTCGACA
TATGGCATGTTGCTAAAGGTGTCAAGAAGAAGCTTCAAAATCTAGCCAAG
TTGAGGGACGGTCAGGCCCTGAAGCCTTGGATTTCT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00160035BlTCONS00160035-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00160035-exon-xpSc0039740-1564993656:15436..15819BlTCONS00160035-exon-xpSc0039740-1564993656:15436..15819Branchiostoma lanceolatumexon
BlTCONS00160035-exon-xpSc0039740-1564993656:16038..16221BlTCONS00160035-exon-xpSc0039740-1564993656:16038..16221Branchiostoma lanceolatumexon
BlTCONS00160035-exon-xpSc0039740-1564993656:16510..16579BlTCONS00160035-exon-xpSc0039740-1564993656:16510..16579Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
xpSc0039740genomexpSc0039740:15436..16579 +
Properties
Property NameValue
GeneIDBlCUFF086019