BlTCONS00065623 (mRNA) - B. lanceolatum

Overview
NameBlTCONS00065623
Unique NameBlTCONS00065623
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000055:839481..841001+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>BlTCONS00065623 ID=BlTCONS00065623|Name=BlTCONS00065623|organism=Branchiostoma lanceolatum|type=mRNA|length=1521bp|location=Sequence derived from alignment at Sc0000055:839481..841001+ (Branchiostoma lanceolatum)
AGCAGTTATGTGCCCACAACTACCCAGTCAAGTGGGCAGCTAACGCCTAC CAAGCCTGGGCAGAGCAGGAAAACAGAAAACTGTCAGCAAAACAACCGGC GGAAAAGTTCCTCGCTCCCACCGATTGGTCAAAAGCCACCCCAGAAGAGG CAAACTTCTGGGTCAGCAAGTATCTCACTGAAGTGAGGAAGCAAGATGGG ACACCGTACACTCCTAGTACGCTGCAAACCCTCGCCCATGGGCTTGACCA TCACATCAAGGAAGACCTGGGAATCAACTATTTAGACCTGATGTCAAACA ATCTCCAGTTTGCAGATGTGCGCAATGCTCTTGTCAACCAAAAACAACTC TTCGGCCACTTGGAGGGGATATCGAAGTACGGAGTGAAGGAGTTCACCCA GCAAGATGAGGTAAAACTGTGGAGAACGGTTTTCGACTTAAACACTCCAC AGGGACTACTGTACGCTGTGTACTACCATAACTGCAAGTTATTTGGTGTC TGGACAGGCGAAGAGCATCACAGCTTGACCGTGTCGCAGTTCAGCTTCGG CCAAGACAACAAAGGGCAGTTTGTCAAGTTCATTCGACAAGGACGGAGGA AAAAAGACCAGGGGAAAGCGTATACTTACCATGCAGTTCCAGGAAACCCG TGGTGCGTGGTTGGCCTGTACCGGCTGTACCTCAGTAAGATTCCGCCAGG GGGACATTTCTACTTCAGACCTGCAGCGAACCAGAACCCTGTTAGTTATG GCAGCCATTGGTACAGTACGCAGCCCATCGGACACAACCATTTTGCCACC ATTATGGCAAAGTTGGCAGAGATGATTGGACTAGAGGGGCGCTACACCCC TGCTTCTGCCTGCAAGGTGAGTGGAACATGATTTAGTAACCTTGAAATGC ATGTACACCGGAAGGTCAAATACAATGTATAGTGATGAGAATGTTGATTA ATTAAGTCACTGCAGTTGTTGCAAATGGAAAAAAAATATGTAACCATACT TTGTATGCTAAGAACTAATTTCATATAATTATGTCGTGAAACGTTTTGAG TAAAAGCAATTTGCAACTGTTATACAAAATTACAAAGCTGTTGAAAAGTG GCTTGGCTATCAGGCAAAATATTAAGAGGTCACCGGTTCAATTCCTGGCA TCCCTGGCTAGACGTTGTGTCCTTGAGAAGGCATTTTAAATGGCTTTCCT CACTCCAACCTGGTGTAAAAATGAGTACCTGACTTTGCTAGGGGAGGTAA AAGGCGGTGGAAGGAGAGGGTTGGACTCCGTCTTCCAATACCGTGCCCTA GACACAGTGGGCCAGTGGATAACAATCCACTGCTCCTAAGGCCTCCCTAT TACAGGGAGTAGTAAGTAAGAATATCTTTTTTTTTTAATTGTTGTTGTAG TACTAGTAGGGAAATGGAAAGGATTCTTATTTCTGTATTTCTCTTATTTT TACAGAAAAGGCCTTTACGTGGAGACCTGCCCAGCTGTAAGAGACTGTGT TCCCATGAACACGTGCCAATT

Coding sequence (CDS) from alignment at Sc0000055:839481..841001+

>BlTCONS00065623 ID=BlTCONS00065623|Name=BlTCONS00065623|organism=Branchiostoma lanceolatum|type=CDS|length=930bp|location=Sequence derived from alignment at Sc0000055:839481..841001+ (Branchiostoma lanceolatum)
CAGTTATGTGCCCACAACTACCCAGTCAAGTGGGCAGCTAACGCCTACCA
AGCCTGGGCAGAGCAGGAAAACAGAAAACTGTCAGCAAAACAACCGGCGG
AAAAGTTCCTCGCTCCCACCGATTGGTCAAAAGCCACCCCAGAAGAGGCA
AACTTCTGGGTCAGCAAGTATCTCACTGAAGTGAGGAAGCAAGATGGGAC
ACCGTACACTCCTAGTACGCTGCAAACCCTCGCCCATGGGCTTGACCATC
ACATCAAGGAAGACCTGGGAATCAACTATTTAGACCTGATGTCAAACAAT
CTCCAGTTTGCAGATGTGCGCAATGCTCTTGTCAACCAAAAACAACTCTT
CGGCCACTTGGAGGGGATATCGAAGTACGGAGTGAAGGAGTTCACCCAGC
AAGATGAGGTAAAACTGTGGAGAACGGTTTTCGACTTAAACACTCCACAG
GGACTACTGTACGCTGTGTACTACCATAACTGCAAGTTATTTGGTGTCTG
GACAGGCGAAGAGCATCACAGCTTGACCGTGTCGCAGTTCAGCTTCGGCC
AAGACAACAAAGGGCAGTTTGTCAAGTTCATTCGACAAGGACGGAGGAAA
AAAGACCAGGGGAAAGCGTATACTTACCATGCAGTTCCAGGAAACCCGTG
GTGCGTGGTTGGCCTGTACCGGCTGTACCTCAGTAAGATTCCGCCAGGGG
GACATTTCTACTTCAGACCTGCAGCGAACCAGAACCCTGTTAGTTATGGC
AGCCATTGGTACAGTACGCAGCCCATCGGACACAACCATTTTGCCACCAT
TATGGCAAAGTTGGCAGAGATGATTGGACTAGAGGGGCGCTACACCCCTG
CTTCTGCCTGCAAGAAAAGGCCTTTACGTGGAGACCTGCCCAGCTGTAAG
AGACTGTGTTCCCATGAACACGTGCCAATT
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00065623-exon-Sc0000055-1564993656:839481..840346BlTCONS00065623-exon-Sc0000055-1564993656:839481..840346Branchiostoma lanceolatumexon
BlTCONS00065623-exon-Sc0000055-1564993656:840936..841001BlTCONS00065623-exon-Sc0000055-1564993656:840936..841001Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00065623BlTCONS00065623-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000055genomeSc0000055:839481..841001 +
Properties
Property NameValue
GeneIDBlCUFF032077