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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000052:1717173..1722878+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00063998 ID=BlTCONS00063998|Name=BlTCONS00063998|organism=Branchiostoma lanceolatum|type=mRNA|length=5706bp|location=Sequence derived from alignment at Sc0000052:1717173..1722878+ (Branchiostoma lanceolatum)
CGCTGAGGACAGAGAAAAGGTTGGGTTTAAATTTCGTATAAACTACGGGA
ACGTTTCTTCGTATGACGTCTAAGGTGAACATTTAGTCATCCATCAGTGT
ACGGAACACGTCATGAGCACTTAGCTAAGAAACAAAACGGTGTCGAATAC
AACGTTACAAGTTATAGATAATCTGGAGAAACCTGGAGATACTGCACTAA
TCTCCTTATAGTTATACTAGTTAGTATAACGTTAGTAAACAAAATGTATT
TATATAGTAGTTGTGGCGACTGTCGCAGGGCTGTCTGTTGACTTGCCGTA
CCTTAAGCTGATGTATAACTGCAAGCAATACCACCAAATTGTTTCTAAGG
AGTTTGTAGCTGTTTGTGATGAAGTCCAGATGATATAACTGACTAAGGTT
CACCTGTTTTGATTCCAGACCCAGGAAGTGTGGGGCAGGTGCTTCTGATG
GACCGCTCTTCTGTCCGTACCAGACTACTCTGACTTGTCCAGCTGACGGA
GCTCCCCCTCTAGGACTTCCCCCTAGACCCCCCCCCCCAGCCATGGCGTC
CACGCGGAGCCGGGGGGAAGGCGGGCTGCTGTACTGGGGACTCAAGGTCT
TGGCAGGTGGGTGCCAATGTCTGGTGTTACTGTGCCGTACATGTACAAAT
TAGGGCCTTGAACATCCGTGGACCTTTCACGACGAGATGATGTGAATGTC
CAGGTAAGAGAGTAATTATAACATCCCCCCCCCCCCCCNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNCCCCCCCCCCCCCAGGCGCGGCCGGTGCAGCGGT
GGTGGGCGCGGCCGCCTGGGCTGCCAAGAACTTCTACGAGTCGTCAGACG
CGGCGCCTGGACCCCCTGCGGAGCGGGCCTGGCACGAGTCGGAGGAGTCC
AGCGACGAGGAAACACGAGAAAGGGCGAAGGAACGCCTGCCCAGGTCCAA
TGCCAGCTCCCCGTACAAAAAACCCTCCCCAAAGCAGGGCAAAATGGACA
AGAAAACTCTCCTGCACAAACTGCGCCGTTACCATGACAACCTGGCAGAG
ATTCCGCAGAACGAGATCGACATGGCAAAGGAGGTGACCCAGATCATCGC
CACGGCGATACGGGACTTCATCAAGACGAAGAAGCCGGAGCTTCCGCTGG
GCGACCTGTACGCGGACGGACGCGTGTACGACGGGATGAAGGTAACGTGA
CTTTCCCCTGGAGCGTGTTTAGTGCAGTGGTGCTGGAAGCCTGTAGTGTA
GTTAGCATGCGTAGTGTAGTGGTGCTGGAAGCCATTAGTGTAGTGTACTT
AGCATGCGTACTAGTAGTACATAGTGGTAAAACAGTAGTGTGCCTAGTCC
AGTGGTGCTGGAAGCAAAGCCGTTAGTACGATTCTGGCCGTGTCGCTCAC
CCGACATGCATGCTACCGGAAAGGGTTACAGTTTACTTAGGACGGGACCT
TAACCTGTGGACCACGCACTGTTTATTATAATTGTCGATAAGAGACAGGG
AATTTCCCTGTACAATGAACCTGTAAATACTTACATGTAGGGTCTGTCAT
GACCAGCGGAAGCACACTACTGCTCTGCAGTGAGCTAAACTGGATATCAC
TGAACAAAAAAACCCTTTTTAGTATTTTACAGAACCAAGTTTGTCTGTTT
ATTCAGTGATATCAACGGATCAATCTCACTCTCCTCCCTTCCCAGGTGAT
CCGAGCGGACCAGACGACCATCATGGCGCCCATGAGCCTGGACGTGAACA
TGTGGGAGCTGGTCCCCGGGGAGGAGACCGTCCTCTGCGTCCCCGGCTGG
TGCCTGATCCGCCGGCAGAACGTGGACTACTTCCCCATGGGCACCTCCGG
GTGGGACCACTTCGTGATCGGGGGGTACCTGTCTCCCCGCGTGGTGATGA
AGATGTTTATCAGGATGGTGCAGGAGAACATCGACTGGCCGTCCCTCAGC
CACTGCTTCGGCTTCCAGGTAGGGAACCTTATTTTGCACACACCATATTT
AGATCCTCAATTAGCTTGACATTTCAGCTATTCTTCCTGTGGTCTCTACA
TTCAGTACATTTAATACATCACATAATAGAAGGGTTGACATAACAGTACA
ATCATAGTTGATAAAAAAGACACAATTTGTTTTAAGTATCATGTATAAAA
ACTTGGAGATTCATTTAATGCCACTATGACTTTTCAGCTACTAGACTGTT
GATGAGGATGTAAAATGTACTTGTCTTAGCGGATCACAATGATGATCACA
GACAGTAAACCTTCCCTTCCTGCAGGTTCGGCCGAAGATGCGGGGCCTGA
CGGCGGCGTTGGACGTGTTCTACGGGAGCGACCTTCAGCACCGCGTGCAA
ATCTCGCTAACCCCCGCCGTTCGCTTCGAGAATCTGGAGCTGGTCGCCAG
GCCACACCCGGCAACCCTGCAGGCGGCGCGGCCAGACGGCGTGGAGAGCT
ACCAGAACCTGTGGCGGGAGTCGTTCATGGAGGCCGAGAGGATCAAGCTG
GAGACGCTCGAGGTGACTTTCATCATAGAACAACATAATCACATGCTCAT
AGCTCTCATAGTACAATATAATCTCATAGAACAACAATCACATGCTCATA
GCCCCCATTGATTGTCAACTGTATGGTGGGTAGTCCAGTGTTTAGCAGCC
TTGCCTCTGGAGCTAGAAGCCGTGAGTTCCATCCCGGCTGTGTCGCTCAC
CCCGCTACCGGAAAGGGTTGCAGTCCTTAGGACGGGACGTTAAGCTGTCG
TTCACTGTTCATTGTACTTGTTGAAAAGAGCTTTGGGAATTTACCTGGTA
CAATGAACCTGTAAATACTGTACATAGCGTACACGACACAGTAGAAGAAT
AGCTCCTCGTGAGCTAAACTGGATCGAGATCACTTTCACTTTCTTTCTTT
GTTCTTTCCAGGACGAGCTGGGCTGTCACCGGGTGTGTCTGAAGGTCGTC
AAGGCGGTGACGGAGACGAACTCGGAGCTGCGGGCGCTCAGGTACGAACA
CCTGCTGCACCTGCTGTTCCACCTGTGCGACAAGGAAACCAGGTGGGAGC
CCGACCACCTGGTGGACAGGTGAGAACAGCTTTCACTTTCACTGTGGCCA
GGGTAGACTGTACAGTTACATGTGTTAGCTCACAGTCTACACAATGTATT
ATCAGTAATAGTATTAAACACTGAAGCAACATTGGTCCAGTCAGTCTGCA
ATGTCCTCTCAGAATGTACAGTTAAGATTCCATGCTAACACAGCCACCCA
GGCCTACCTTCAGAGAGACCTGTACACTCTGACAGTAAGAGTTGTATCTG
TACACTCTGACAGTAAGAGTTGTATCTGGACACTCTGACAGTAAGAGTTG
TATCTGTACACTCTGACAGTAAGAGTTGTATCTGGACACTCTGACAGTAA
GAGTTGTATCTGTACACTCTGACAGTAAGAGTTGTATCTGGACACTCTGA
CAGTAAGAGTTGTATCTGTACACTCTGACAGTAAGAGTTGTATCTGGACA
CTCTGACAGTAAGAGTTGTATCTGTACACTCTGACAGTAAGAGTTGTATC
TGGACACTCTGACAGTAAGAGTTGTATCTGTACACTCTGACAGTAAGAGT
TGTATCTGGACACTCTGACAGTAAGAGTTGTATCTGTACACTCTGACAGT
AAGAGTTGTATCTGGACACTCTGACAGTAAGAGTTGTATCTGTACACTCT
GACAGTAAGAGTTGTATCTGGACACTCTGACAGTAAGAGTTGTATCTGTA
CACTCTGACAGTAAGAGTTGTATCTGGACACTCTGACAGTAAGAGTTGTA
TCTGTACACTCTGACAGTAAGAGTTGTATCTGGACACTCTGACAGTAAGA
GTTGTATCTGTACACTCTGACAGTAAGAGTTGTATCTGGACACTCTGACA
GTAAGAGTTGTATCTGTACACTCTGACAGTAAGAGTTGTATCTGGACACT
CTGACAGTAAGAGTTGTATCTGTACACTCTGACAGTAAGAGTTGTATCTG
GACACTCTGACAGTAAGAGTTGTATCTGTACACTCTGACAGTAAGAGTTG
TATCTGGACCCTCTGACAGTAAGAGTTGTATCTGGACCCTCTGACCTGTG
GATTTGTCTCCCTTCAGATACGAGGACATGCTGCAGTACCTGCAGGGGGC
GCTGGCCCAGGGGGCGCTGCTGCACTACTTTGATGAGAGTGTGAACCTGT
TTGCTGACCTTCCTGCAGAGACGCTGCAGACGATGCACAAGGTCGTATCG
CTCGCCGTGACACACCCGGCCACCCTCCTGCAGAGATGAGGGCACCTGTG
CACCTGTCAGACACCTGGACTCACCTGCCCTGTACTGTACCTGATGCAGG
TGACAAAGGCTTGTCAGATGCTAGCAAACCGCCACAAGTGACAATGTGTG
GGCTGGAGGTATTCCTGCTTCTAACATGGTGGAGGAGTGTCATGTTACAT
GAGGACTTTGCTAGACTGTTGCGTGCTCCAACATGGCAGAAGGGAGTCTT
GTTACATCAGAACTTCCCATGTTCCAACATGGAGGAGCAGTGTCCAGTTA
CATTAGAACTTGACAACTCAGGGGTTCTCTGTACTTCAACATGGTGGAGA
TGTGTCGGGTTACATCAGAACTTCCTGCATATTCCAATATGGCAGAAGAG
AGTCAGGTTACCTGGGAACCAGGCAGACTAGACTGGCATCAGCCCAATAT
AGAATGTTACAACAAAATACGCCCATCAGGGTCAGACATACAAGTGAAAA
TTATGTAATACAAAATAAATCAAGTAACGGGATAAGTTCTCTAAAGAGTC
GGACGTTTCAAACAGCGTCCACTGTCTTTCATTAGTGACAAAACGACTGA
AGACAAGTAGAACCTGTAATATAATAGGCTGTATATAAGTATCAAAAGGT
TGTTCCAAGTAATACAACAAATGACTGCACAGGCTGCCACAGCAGAAATT
TGGAGTACATCATCATCATCATCGTTCCTCCTCTTACGAGGTGCAGCAAG
AGAAGTTGGTCCTCCAGAATTTCTTGTCATTCATTGCAGAAAGGAGTTCC
TGTCCTTCCAAATTTGGAGTACAACAGTCTAGAATAACATCTTTTGCAAC
AAACTTATGTACACTTGAACATGAGGCTGTACTTGTTACCATAGTGATCA
CCATAGCAACATGTTCCCTTCCCTTAGCATGTGGAAGGTTAATATCTATC
CCGGTAAGAACTACATGAGAACTTTTGTGTACAGGTTATCAGAAATTAAA
TTAAAT Coding sequence (CDS) from alignment at Sc0000052:1717173..1722878+ >BlTCONS00063998 ID=BlTCONS00063998|Name=BlTCONS00063998|organism=Branchiostoma lanceolatum|type=CDS|length=1455bp|location=Sequence derived from alignment at Sc0000052:1717173..1722878+ (Branchiostoma lanceolatum)
CTGAGGACAGAGAAAAGACCCAGGAAGTGTGGGGCAGGTGCTTCTGATGG
ACCGCTCTTCTGTCCGTACCAGACTACTCTGACTTGTCCAGCTGACGGAG
CTCCCCCTCTAGGACTTCCCCCTAGACCCCCCCCCCCAGCCATGGCGTCC
ACGCGGAGCCGGGGGGAAGGCGGGCTGCTGTACTGGGGACTCAAGGTCTT
GGCAGGCGCGGCCGGTGCAGCGGTGGTGGGCGCGGCCGCCTGGGCTGCCA
AGAACTTCTACGAGTCGTCAGACGCGGCGCCTGGACCCCCTGCGGAGCGG
GCCTGGCACGAGTCGGAGGAGTCCAGCGACGAGGAAACACGAGAAAGGGC
GAAGGAACGCCTGCCCAGGTCCAATGCCAGCTCCCCGTACAAAAAACCCT
CCCCAAAGCAGGGCAAAATGGACAAGAAAACTCTCCTGCACAAACTGCGC
CGTTACCATGACAACCTGGCAGAGATTCCGCAGAACGAGATCGACATGGC
AAAGGAGGTGACCCAGATCATCGCCACGGCGATACGGGACTTCATCAAGA
CGAAGAAGCCGGAGCTTCCGCTGGGCGACCTGTACGCGGACGGACGCGTG
TACGACGGGATGAAGGTGATCCGAGCGGACCAGACGACCATCATGGCGCC
CATGAGCCTGGACGTGAACATGTGGGAGCTGGTCCCCGGGGAGGAGACCG
TCCTCTGCGTCCCCGGCTGGTGCCTGATCCGCCGGCAGAACGTGGACTAC
TTCCCCATGGGCACCTCCGGGTGGGACCACTTCGTGATCGGGGGGTACCT
GTCTCCCCGCGTGGTGATGAAGATGTTTATCAGGATGGTGCAGGAGAACA
TCGACTGGCCGTCCCTCAGCCACTGCTTCGGCTTCCAGGTTCGGCCGAAG
ATGCGGGGCCTGACGGCGGCGTTGGACGTGTTCTACGGGAGCGACCTTCA
GCACCGCGTGCAAATCTCGCTAACCCCCGCCGTTCGCTTCGAGAATCTGG
AGCTGGTCGCCAGGCCACACCCGGCAACCCTGCAGGCGGCGCGGCCAGAC
GGCGTGGAGAGCTACCAGAACCTGTGGCGGGAGTCGTTCATGGAGGCCGA
GAGGATCAAGCTGGAGACGCTCGAGGACGAGCTGGGCTGTCACCGGGTGT
GTCTGAAGGTCGTCAAGGCGGTGACGGAGACGAACTCGGAGCTGCGGGCG
CTCAGGTACGAACACCTGCTGCACCTGCTGTTCCACCTGTGCGACAAGGA
AACCAGGTGGGAGCCCGACCACCTGGTGGACAGATACGAGGACATGCTGC
AGTACCTGCAGGGGGCGCTGGCCCAGGGGGCGCTGCTGCACTACTTTGAT
GAGAGTGTGAACCTGTTTGCTGACCTTCCTGCAGAGACGCTGCAGACGAT
GCACAAGGTCGTATCGCTCGCCGTGACACACCCGGCCACCCTCCTGCAGA
GATGA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| BlTCONS00063998-exon-Sc0000052-1564993656:1717173..1717191 | BlTCONS00063998-exon-Sc0000052-1564993656:1717173..1717191 | Branchiostoma lanceolatum | exon |
| BlTCONS00063998-exon-Sc0000052-1564993656:1717591..1717778 | BlTCONS00063998-exon-Sc0000052-1564993656:1717591..1717778 | Branchiostoma lanceolatum | exon |
| BlTCONS00063998-exon-Sc0000052-1564993656:1718404..1718813 | BlTCONS00063998-exon-Sc0000052-1564993656:1718404..1718813 | Branchiostoma lanceolatum | exon |
| BlTCONS00063998-exon-Sc0000052-1564993656:1719318..1719590 | BlTCONS00063998-exon-Sc0000052-1564993656:1719318..1719590 | Branchiostoma lanceolatum | exon |
| BlTCONS00063998-exon-Sc0000052-1564993656:1719898..1720134 | BlTCONS00063998-exon-Sc0000052-1564993656:1719898..1720134 | Branchiostoma lanceolatum | exon |
| BlTCONS00063998-exon-Sc0000052-1564993656:1720534..1720691 | BlTCONS00063998-exon-Sc0000052-1564993656:1720534..1720691 | Branchiostoma lanceolatum | exon |
| BlTCONS00063998-exon-Sc0000052-1564993656:1721740..1722580 | BlTCONS00063998-exon-Sc0000052-1564993656:1721740..1722580 | Branchiostoma lanceolatum | exon |
| BlTCONS00063998-exon-Sc0000052-1564993656:1722695..1722878 | BlTCONS00063998-exon-Sc0000052-1564993656:1722695..1722878 | Branchiostoma lanceolatum | exon |
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000052 | genome | Sc0000052:1717173..1722878 + |
Properties
| Property Name | Value |
|---|
| GeneID | BlCUFF031349 |
|
