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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000052:569590..576317+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00063876 ID=BlTCONS00063876|Name=BlTCONS00063876|organism=Branchiostoma lanceolatum|type=mRNA|length=6728bp|location=Sequence derived from alignment at Sc0000052:569590..576317+ (Branchiostoma lanceolatum)
GAAGCGTATGAAAATGTATCGCGCGTGGCATGAAGCGCCACCTGTTGATT
AGCCTGGTATAACAGGTGCTCTGACGTCAATTTTGAGGGTCAAAGTTGAA
CCACTCAAGATGGCGGACGTTCCCGAAAATGCGCCCGATCGTGAGTCTTT
TCAAAAAGTTGTAGACTGTAAAAAGTTTCGTTTACGTTCGTCTACAGGAC
TGCAGTAAGTGGTGTATCTTAGATTGAATACCTGTCTTAAAAATGCTGAG
GTTTCATCGGGTTTAAAAAGTATTTCAAGACATAATCGTGACACAAGGGG
GAGGGTGACGCAATTTTTTTCTGACAGAAGTTTTAGACTTTGCACTAATT
ACAGTAACCCGTTACCGTAACCTTGTTTACCCCGTACAAAGGACAACACA
TACTTGTGGCTTTATGTGTGTGTGTGTGTATGTGTGTGAATGTAACTGTG
GGTGGGTGTGTCTGTGAGTATGTGGTGTGTGGATGTGTGGGGTGGGTTGT
TACTATCATGATACCATGTTATAATACTGTGTCACTGTTACACTGCACTA
TCCCCCCAGACTGCCCAGGCACAGACAGTGAGGATGCGGGTAAGACGTCG
GCCTGCCAGGGCTGCCCTAACCAGGCTGTATGTGGGAGGGGTGTGTGTGG
GAGGGGTGTGTGTGGGGGAGGGGGGGTGTATTATATGTGTGTGTAATAAC
AACACCGCTGCTACCCCCCCAGACTGCCCGGGTACAGACAGTGAGGATGC
GGGTAAGACGTCGGCCTGCCAGGGCTGCCCTAACCAGGCCGTCTGCGCCA
GCGCCTTGCCCAAGGCTCCAGACCCAGGTTGGGTGTTCTGCTAGACTTAT
AAACACATTCACTCACTCTCCATTTCAATGAAGCAGGCAGATGATGACTG
CCATCTATATATATATATATAGTACTGGGCAAAACCCGGTGTGGGTGTAG
CGCCCAGGGTGCACGCCTAAGGCGGCCGGTGGTGGTGGTGCTCCACAAAA
AAAGTGCAGAATTTAAACTAAACTAACAGTAATAAGCATGACCAATATAA
TATAGAGAAAAAAAAGTAAAAAAAAAAGTGCCACGTTGGTGATTTTTCAT
TCAGAATGATCGCAGCTCAAACGTATGTTTTTGGTATTCTCTTCCTTGAT
GAGCTACTAGTAAAGACACTAAAATGATAAACAATCAGGGATCTGTCCAG
AAATACAGTCAAACCTGCCTAGGCGACCACCTTTTCAACGCGACCACCTG
GTCATGGCGACCACTTTTTCTCGGTCCCGAAAATTTTCCCCATAGGCACA
AGCATTAAGCTGCCTGCCCAAGGCGACCACCTGTCCAACGCGACCGCGAC
CGCCACGAATTGGGACCGCACAGAGCACAATCCCTGCCCATGGCGGCCGC
CTAATTTTCAAGCGTGTGGTGACATCGGATCATTTTGCTGTCGGATTTCA
CGGAAATGTTTTNGGCCATGGCGACTGCCTAATTTTCAAGCGTGTGGTGA
CATCGGATCATTTTGCTGTCGGATTTCACGGAAATGTTTTCAAGACTTTG
AAGGACAAAAATAAGGACAAAAATATATGGAATAGCAATGTTATAGCATC
GATTCCTCCATGAAGTGTTTTAATAAAACGTTCCCCCTATAAACATTGTA
AAGACAAATGTTTGTGATGTTGTTGTGCCTATCGTAATCTTATAGTTTAA
CGCAAACTCAGTTCGGTTTAAACTCAATTTTCAAAACGAATACGTAGTGC
ATGGCGTCAAAAAGTCAGATTTCACAGAAATTACTATCTATTTCTTGTAT
TTTCAACAAAAATGTGTCTGTGTCTTACTAAATTTCGTCGAAAAATGACT
TCGCGGCGGGCAAAACGTCGGGCGAGAAATGTTGTTCCTTGGTCCCGACG
CCATCTTGGATTTGGCGCGGCCCGGATTTGGCGTACCGCTGACCTTTCTA
AAACACGATGCTTTTGTGTATGAACATTTACGAATACTCTAGTTATTGAT
GAAAATTAATATTCTTATTTTCTTTTTATTTCCATGAATCTCACAAACCT
TTATTGGACGCTGTGCGTTCTGCTGCACTGACTTACCTTTCGATGCGGCG
CGGCACGACGAAATCACACCGTTCCGTTTTCAGCTTTAGTTGTCAGNAAA
CTTTTTGCCCCTTTTATCCAGCGGTCGGCGCCCCAAAAAAGGCTGGGGTC
AGCAGGTTTTTTCTAGGGATTTGTCTTAGGCCTTAAAACTCCGATGATGT
GCGTGTGTGTGAGTGTGTACTATTTAATGTAACCTGTGAATGCGGGAGGG
CGCTGCGATCATCGAGGCAACCATTGTTTTGTAGTCAAAATTACGACAAA
ACTGTGTACACGATGTAGCGGTATACAATTATTACGACGATAACGGAAAA
TGTAATTTTTGTAGGATCTTTCTGTCAATGAGAATTGAACCTGGCGGGGG
TCTAAATTCACATAATTTTCCATCCATTTATGTACTGTATTGAAAACCTC
GACCTGGAAACATGTGAGTGGAATTCTCTTCATGGCGACCACCTGTCCAT
CGCGACCGTTTTTGCTCGGTCCGCCGGGTGGTCGCCTTGGGCAGGTTTGA
CTGTATAGAGCAGGATGGGGGTAGGGTGCGAAGTACCGAAATTGATTGTT
GCAAAGGTGAGGGGGCTAGGGGGTCCTGGAGAGGGGCGTACACGCCTGGA
GTGGCTGCCGTTACAACCGTGCTAGGCAAGGCATTCCACTGTGGCATGGG
ACGTGGGGAAAAATGAGTATTTGTATGTGTCTGTCCTAGCGTTTATAGTT
TGCAGTTTGAGATGGTGGCTCCCCCGGGTGCGCCTCTGGTTTAAGTAGAC
TGTCATTTTTTATATCAATATGGTTGTATACAAGCTTGTAAAACGTATGT
CTTAACTTTCTCCCCCCAGCCGTTGAAGAAATCCGTGAGCGACTTTCCTC
GGTGAAACACAAGCTACTAGTGCTGTCTGGGAAGGGGGGAGTCGGGAAGA
GCACGGTCACTGCACAGCTGGCCTTTGGACTGGCCAGGCACGAGGACACA
CAGGTAACAAACAAACAAACAAACAAACAAACAAATGTAAGAGTATGTTA
GCTATACTGCTGGCCTTCCGAGCTAGTTGGTTTGAGCCGCTGCACATTGT
TTGATAACCCTCTACTCTTGTCAAACGAGTGATGTAGGGGTAGGATGTGG
TCTTTGTGATGACATATCTTTGTGACAAACGACTTCCGACAAGTGACAAA
CCAAGTGTGTATGGGGGCACCTACCAGTGAATCATCCAACCTCTGCATGT
AAGAACCCAACACACTTATCAAGAAGAGTAGGCCTGGGTTAACCTGCTGT
GCTGAGGGTTAACTTGGAAATCAGGGAATTACGGGCCCATGCCCTCTCCC
ATCGCTCCGGGACCAAAAACTGTGCTGAGAAAAACATATATATATTTGGA
CGCCTCATTATCATCAAACAGGCTCAAACCTCTGCACATAAAAGAACCCA
ACACACTTAACAAGAAGAGTAGTGGTCATGTGTGCTTGACTGAATGCTCC
TCTCTCTTCACCAAAAAATGTATGTGCTGAGTATGTGTTTTTGTGTTTAC
CCTGTTCCCAGGTGGGTGTGCTGGATGTGGACATCTGTGGACCATCCATC
CCCAGGGTAATGGGGTTGGAGGGAGAGCAGGTGATGTTTTTTTGTGCGAT
TCTTCTAGAAATACCATTTTTAGCATAATGTTATGAATAAAGCAAAGCAA
TGTTAGATTGAGCATGTAAGGTTGCATTGTTCTGTGTGTGATTTTTGCTA
TAGGCTTTGATGTACAGTCAAACTTGGTATCGACAACCACTCAAGGAACT
GAGGAGAAATTAGTGCTGCGTACCGGTACTGTACCGTAAAAACGGATTAG
GTACAGGTCCAAATTACCGGATCATGAAGTACCGGTACTGTACCGATATA
GATTTACACCAAGTATGTGCTTGTATTGTGATTGATCTCCTGCATGACCT
CATGGCCTCATACAACACCAAACCTGACCAGTGATACCTTGGAACAGCGT
AACTAATATGCAATAGATCATTCAGGCAGGCCAGAAGTTATGACAGCAAG
GCCAAGGGAGTTTGGCGGTAGGAAACCTAGTTGTTTTCTTTGACTAAAGA
TACTGAAATTATTCAGGTACAGGTACAAGTCCGGACCTGTACCTAAACCT
CTGTACCGGTACCTGTACCTGTACCTGATGCTACATTTAGGTACGCAGCA
CTAGGAAAAATGGTTAATTGCTCTAGAAAATGCCAGAGGGTCTTAACTAG
TATGCATAGTTGTAGAAGACCTCACGAAAGTCGCTGTACTTTTGTCGTGT
CAATAAAGATTGTATGTAAAAATCGGACGAGGCTATTATAGCATGCTAAA
GTAGCCGTTTGGTACCCCATTCTCTATCGGTTATAGGGTTAGGGAGAAGG
TTAATATGGCTGTGACTGGGGATGGTTTTTTTGGCCAGGGTTTACTGTAT
CTTGGTAATGTAGGGATTGCAGGCTTTTTTTTTCTTTGTTTATGATGATA
ACCTCTATTTCTAGTAGTAGAACTTCAGATAAATGGTTCGATGAAACACT
TAAAGAAGCACAAAGCAGTGCTGGCTTTGTGTCAATAAGAGCCCTCATAC
TCAAAGGGCTCTCACTGCTCTTTTCAAGTTCTCAGTCATTCTCTTCAAAC
ATTATTCTCTAACAGAAAAAGTGCCCTTGAATTACTACTGCAAAATCTGA
AGAAAAGGTCCCTTTAACTAGTGTTTCAAAAGAGGAAAAGGCACTTGAAC
TACGATTATGAACAGAAAAAATGGATTGATTTCAAAAAAACAATGGAACA
GCTTTCCATATCCGCTATCCGTTCCTATGTTAGACCCCCTCCCCATTCGG
TATAATAACCATGTAAGAATCAGACTCTATACAATGTACAGTTACTGTAG
TAACCTCTAAAGTTCTACCAGGGTTTTGTCAATGTTGACAGGAATATGTT
ATTTGTTATCATACATTCTTTGATTACATGCTTTGAAATTGAATCATATT
TTCAGATCATGTATACTGCTTCATAAGTATGTGTCTACATGTACTGTTAC
AGTAGGTTATCAATTTTTCTGAAATGAAACAATAAGAATGAAATCTCACC
CCTGGTCCTCCTGTTTTTGAACCTGCTGATGTCGACCCCTACAGGTGCAC
CAGAGCGGCTCCGGCTGGTCACCTGTGGTGAGGAACGCTGCATCTTGTCT
TCTCCTTCTTCTCTAGATGTCTTAAAGAAAAAGCAGTCCTCCTTCTAACT
CCAGTAGCCTGTAGACACCTGTAGAGCAGCGGTCTCCTGTGTGTGGCTGC
CTGGTCTCTGGTTGTTAGGGAATACAGACTGGAGTTCTAGAACATGTGTT
TGACCTTTCACCCTGATGACAGTTAGGTTGCCATGGGGATGTTCTAGAAC
CTGATTAGGGCTGGAAGGGGGGCACCCAAGGGTGGGGTCAGGGGTCATGG
GTGGGGTGTTCCAGAATATGGTAGATTTTATTTTGGTAAGGTTTAATTAC
TAATAGGTGAATATTAATTAATTGATTGATTGATTACCACAGCCATGAAG
ACTTTGTCCACGTGTAACATGCGTTTGTAGGTTGGTTCATTTGTAAGCAG
AATAAGTTAGTCTAAAATGGATTTTGTGTGGATTTCGTGGGCCAAATTTC
AGATGATTTGGGGAAGCATCTCAACTACAGATTTAAGATTGATTCTATTG
CAAGTGGAACCATTCTTAGATGATTGAAGGTGTAGACATGTAGGGTCTTC
CTAGTGGTATCTGCTACATATAATAGATAACTTAAAACTTGTCGGAACCC
ACATGTACTCTTCATGTCAGAAACTACATGTCGTATACCACGTGATTCTG
CTTTGTATATATAATATATACAATGTGACACCCTGGGGTGATGTCTGTGT
GGTGTAGGGTAAATATGTTTAAGTGTCTGTGTATGAATAAGGTTGGTTTG
TCGTTTTTCTCGTCAGTACCTTGAAGACAACCTGGGGGTGATGTCTGTCG
GGTTTCTCCTTGCTTCACCCGACGATGCTGTCATCTGGAGAGGACCCAAG
AAAAACGGTAACATTCCCCTTTGTTCCTTGTATCAAGATCATCATCATCA
TCATCATTTTATATCAAGATACCCTTTAGCCTTTGACCCTGCTGCAATCT
TTAGGTTTCAGAATTTTCCCATTTTGTGCGTAGTCTTGAATTTTGATGTT
TTTGTTTATTCTTTGCGTCAGGAGAGTGCGATGAAAAACATGCAAGTCCT
GTGTTTGTTTTAATTCAGAATTTCTGCATACAAGAGGGAGGGTAGACTAT
CTGAATGCATAGTGGTAGGCACAGCCTATTGTAATTAGACAAACGCCTGT
CCATCGTGCAGTCTCCCCCCTAACTCTCAGTGCCCCCCTAACTCTCAGTA
CCCCCCTAACTCTCAGTACCCCCCTGAGGGATGTAGACTGGGGGGATGTA
GACTACCTGTAGACTACCTGGTGGTCGACACCCCCCCCCCCGTGCACCTC
AGACGAACACCTGTCCATCGTTTAGTACCCCCCTAACTCTCAGTACCCCC
CTAACTCACAGTACCCCCCCTTCAGGGTTGATAAAACAGTTCCTGAGGGA
TGTAGACTGGGGGGAGTTGGACTACCTTGTGGTCGACACCCCCCCTGGCA
CCTCAGACAAACACCTGTCCATCGTGCA Coding sequence (CDS) from alignment at Sc0000052:569590..576317+ >BlTCONS00063876 ID=BlTCONS00063876|Name=BlTCONS00063876|organism=Branchiostoma lanceolatum|type=CDS|length=564bp|location=Sequence derived from alignment at Sc0000052:569590..576317+ (Branchiostoma lanceolatum)
ATGGCGGACGTTCCCGAAAATGCGCCCGATCACTGCCCAGGCACAGACAG
TGAGGATGCGGGTAAGACGTCGGCCTGCCAGGGCTGCCCTAACCAGGCCG
TCTGCGCCAGCGCCTTGCCCAAGGCTCCAGACCCAGCCGTTGAAGAAATC
CGTGAGCGACTTTCCTCGGTGAAACACAAGCTACTAGTGCTGTCTGGGAA
GGGGGGAGTCGGGAAGAGCACGGTCACTGCACAGCTGGCCTTTGGACTGG
CCAGGCACGAGGACACACAGGTGGGTGTGCTGGATGTGGACATCTGTGGA
CCATCCATCCCCAGGGTAATGGGGTTGGAGGGAGAGCAGGTGCACCAGAG
CGGCTCCGGCTGGTCACCTGTGTACCTTGAAGACAACCTGGGGGTGATGT
CTGTCGGGTTTCTCCTTGCTTCACCCGACGATGCTGTCATCTGGAGAGGA
CCCAAGAAAAACGGGTTGATAAAACAGTTCCTGAGGGATGTAGACTGGGG
GGAGTTGGACTACCTTGTGGTCGACACCCCCCCTGGCACCTCAGACAAAC
ACCTGTCCATCGTG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| BlTCONS00063876-exon-Sc0000052-1564993656:569590..569729 | BlTCONS00063876-exon-Sc0000052-1564993656:569590..569729 | Branchiostoma lanceolatum | exon |
| BlTCONS00063876-exon-Sc0000052-1564993656:570149..570213 | BlTCONS00063876-exon-Sc0000052-1564993656:570149..570213 | Branchiostoma lanceolatum | exon |
| BlTCONS00063876-exon-Sc0000052-1564993656:570377..570416 | BlTCONS00063876-exon-Sc0000052-1564993656:570377..570416 | Branchiostoma lanceolatum | exon |
| BlTCONS00063876-exon-Sc0000052-1564993656:572509..572642 | BlTCONS00063876-exon-Sc0000052-1564993656:572509..572642 | Branchiostoma lanceolatum | exon |
| BlTCONS00063876-exon-Sc0000052-1564993656:573201..573269 | BlTCONS00063876-exon-Sc0000052-1564993656:573201..573269 | Branchiostoma lanceolatum | exon |
| BlTCONS00063876-exon-Sc0000052-1564993656:574784..574816 | BlTCONS00063876-exon-Sc0000052-1564993656:574784..574816 | Branchiostoma lanceolatum | exon |
| BlTCONS00063876-exon-Sc0000052-1564993656:575606..575696 | BlTCONS00063876-exon-Sc0000052-1564993656:575606..575696 | Branchiostoma lanceolatum | exon |
| BlTCONS00063876-exon-Sc0000052-1564993656:576215..576317 | BlTCONS00063876-exon-Sc0000052-1564993656:576215..576317 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000052 | genome | Sc0000052:569590..576317 + |
Properties
| Property Name | Value |
|---|
| GeneID | BlCUFF031269 |
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