|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000050:806965..814758- Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00063135 ID=BlTCONS00063135|Name=BlTCONS00063135|organism=Branchiostoma lanceolatum|type=mRNA|length=7794bp|location=Sequence derived from alignment at Sc0000050:806965..814758- (Branchiostoma lanceolatum)
GGCGACTTGTCGAAGGGTTTTCCTCCAGATGTTGCGTGGCTACTGCCATG
TCTTCAGATGTGTTTAATCCTAGTCTCGAGCGTCATGTAACTCGTAAAAA
GAAGACGCAGTGAACATTTTCTTTAATATGTTTAATTTTTTTCCCAGTTC
ACCAGCTCCGCCCCTCTGACATCAACGTGGTTGCCGCACTGGGAGACTCC
ATCACCGTAAGTAGTTTATGTCTATCTCTCTACTGAGTCAAGGTTGGATG
TTTTCCTGTGTAGTAGAACCTGTTGAAAGTATCAAAACACAAGTGAAAAA
CCCACGCAACGTGCATGAGTATTGGTGTGATGAGTTCTGCAGGGGATTCT
TAACTTTTCTGCCTTTGGATGGGCATCACTAATGTAGACTCTCAACAGAG
TTTGAGTGGAAAAAACAGTTTGTGAATTGTCGCGATGTGTTACGGAGGGA
CTATATGGACATCCCTACCATTGGATAGCCATCTCTAAATGTAGAGTTAT
CTTTTAAACCACCATACAGGCAGCTAACGGTGCGCTGGCCGGCAACGTTC
TGGAGGTTCTGACTGAGTACCGAGGCGCCTCCTGGAGGTAAGCAACATCA
TAGCAGAGTTGCACGATCGCTGTAACCGTCTTTTGAAGTCTTTTCAAAGC
CTTCATTCGCTTTCAGTCTAGCTATTTGTAAGCCCCCATTCCATTTCGAG
GTCGCCGGCCTAGTGAAATGGGGGGGGGGGGGCACCATCCTCTTTGAATT
GAGTATGCTTGTTTCTTTGTTTAAACCATTCTTTATTAATGAGAAGATCA
AATCGGCTTGTAGGCCACTTTTCATTGAAGTAATGAGGGAGGACATGCCA
GACATATTATTACAACGATTCATAGATACGTGATTACAGTCCTAATGAAT
CTAAAAACATAGAGCAGTATCCATGCATACACATATTATCACAAAACGTA
TATACGGTGAAAGGCCGTGTCTGTAACATATGATTGATGCCAACAAACAC
TGACAATAATAGTACCAACAGCAAAACAGCTCTACTCATCATGAGTCCGA
TGCTGCCTCATGTAGTGTCTAATAGCAAACGTTTCTATTTCGCAATAGAC
GGTTGATTGTATTGCCATTCATTTCCACATGCGATGTCGTTCTTTCCCGT
GTATGATTTTGCCTCATTCTCCCCCCCCCCTCTCTCTCTTCAGCATCGGC
GGCGATGGTACCCTGGAGGACACCGTCACTCTTGCAAGTAAGACATTTTT
CATGTAAGAGTTTTATTTGAGGATAGCCAGACCCCGAGTTAAAGAACCTA
CCATGCACACTTATCAAAAAGAGTAGGGATGCTGGGGTTTGCGGATTCGA
TGGGGTGGTCTACAGGGGTGGGCTAGTGGGGTGGGCTACCTCAGCATCTA
CCCTTTCTGGACCTCAAGGCTGTGCATGGGGGTTTGGCCTCTCATGGAAT
TTCCTTGATTTAGAGGATCTGGGTCAAGCTTAGCCTGAATTCAATCAAGC
CTCTTGTGACCGCTCGCGGCCCTGTAACCACCTCGCAACCCAACCCGCGG
GGAGGGGAGAGAAACCCCCGGACAGCTGGAGTTTGCGTTATACAGACTAG
GTCAAGCTGTGGGTGGGCTAGAAGGAAGGTAACAGCTGATGATATGGCTG
GGGGGGGGGGGGGGGGGCTACCCTAACTCTACCAAGACTGGTAGAAAAGC
CATTTATCATAAACAAACATCTAAGTACTCAGTATACAATTAGGATTTTA
GGTAAGAGGTACAAGGGGAAATAGACTGGAAGTTGGATAGGACAGCTAGG
GAATAAGAGAGCCTTTGTTTGACAAAATTCAAAACATATGTCTCACATTT
AGACTAGAATGTACCTGAATGTATGTGCTTGTATACAATGTACAATGTAT
TTGTGGTTATATGTGCCAGTGTGCATGAGCGTGGGTTGGAATGTTGTACT
AGTAAGTGTGTGTGACTGTGTGTTTGTACAATGTATAGTGTTGCTTTTGT
TGCTCATTTCTTTCTTGTAGCCACAATGCTACTGTCCTGTTGGCCTGACT
GAGCAGTATATAAAGGAACAGGGAGCATAGTCCTCCATGTTTAAAAATCT
AAAACTGGGGATAACAAACTCCTGCACTATGTAAATGTATGCAGTCTGTT
CATTGCCCACCTCCACCCCCCACTGTAGCATCCCCAAAGCAATATGATCC
TTCAGCAAAATAAAGCATTCTTTCCGGCCCTCCCACAGAGTGACCCATCT
TTTCCTCAAGGAAATTCCATTCAATGCTAAACCCCCATGCACAGCCTTGA
GGTCCAGAAAGGGTAGATGCTGAGGTAGCCCACCCCACTAGCTCACCCCT
GTAGACCACCCCATCGAATCCGCAAACCCGGGATCCTTCCCGATGTGAGC
GGATCAAAACCATTCCTGTCTAAATGGGGTAGAGGAATGTACCCGAGTTT
GTAACCCCTGCTTCTTTTATTAGTTCAGTTAGTCTAGCCCTTCTATATCT
TGTTGTTCATGACTTAGGGAGAAGAGATGCTGTCCAGTGAGTGTTTGTTC
GGGGAGTTAGTTCAATGCCCGCAAGTGGTCCCTTGTGGTATTGCACTGAG
CAAACTCGTTAAGAAATACTCATGTATGGACGTCATATTTTGACACTTTG
CTAGGACCAAGGAGGTTTTATAAAACCTCCTTGCTAGGACTAATCTCAAT
AAGATATTACGATATCGATGCACTATCGCCGCAGCTTACTACTTGACTCC
TTTCTTAGAAGTTAGGGTTCATTGTCAAATTTACTCTTCCACACTTCAGA
TATCATCAAGAAGTTCAACCCCAGCGTGAAGGGATTCTCCTTCGGAACTG
GAAATGTCTACAGTTCCGGCTCCAAGCTCAACGTCGCCTACCCGGGAAAG
GAGGCAATGTGAGAACATACAGATCTCTAACCTTGTTACATATACCCTAA
GAATCAAATACCATTGAAAAATATGTAAAAGAAGGTTATACACCGATATC
AAGATCGTCTAAAAACAATACATTTCAATGCCTGTAAACTACACTGTATT
TGAAAAGCAAAATACATGTATGATTACATGAAACTTTGAGATGCTCTACC
AAGTGTCAATGTGTAATGTATGCTTTATATTGTTTTTTTTCTTCCAGCGA
TATGCCGGGCCAGGCAGATGAGTTGGTTAGTCGTCTGCAGAACTCGGTGG
TAAGTTAGCAGTTTTGGCTCTGCCATCTTAGTATCAGCAACGTTATTAAT
CTTCAACAAGATCATGGTCACGGCTTGTTCAACTCACCTTTTGGCGGCAT
TGCCTATGATTATTGGTACTTGCTTGGCAGTGGAGCCCCAGAACATTTAC
ATTCTAAGACAACAACTCTAACCACAAGGCTGCCATTCTAGGAGATTGAC
TACCAGAACGACTGGAAGGTGATCACCCTGTTCATCGGCGGGAACGACCT
GTGCGCGTACTGCGACGACAAGAACCTCAGGAGCCCAGCCAACTACCAGG
GCTTCATCCGGGAGGCGCTGGACAAGCTGCACGCGCAGGTCAGGCTGCTT
TATCATCATCTGTAGGCTGAGGCACTGTAGCTGTATTACCCTTCGGCGTA
ACACACCGGCCTTTGTATCGGAATTAATCGGTACACGTATAACTTCCGTT
CAGCGTAACACACCACCTTCTGTATCTGTATACTCAGTTTAACCGCTCTT
CACAGCGTAACACACCAACTTTGCAGGCACGCGGTACGACAGCAGCTGAT
TGTATTGCACTGAACGACCTGTCACACCTAATTTTGCACTGGACAAGCTG
CGTGCAGGTCATCAGATTGTTTTATTATCATCACTGTCACACGTGCGTTT
TGATGTCCCTGTCACACAGTATGAAAATTCAATCCGCCTATGAGTCTGCA
GTAATTACATAATACGCCAGGTGTTCGAACATCGAAAATCTGTCCCTGGT
GCTGAAAATAGGGATGCGCTTTCCACTACTTGCAAAAATGTGCAACCTGA
GGAGCACAAGAGGAACACTATTTCATTCGAACGTATCAGTACTTTCTTCT
GATCAGATAATATCGAAATATTTCCAAATTATTTTTTCCTCCCTATACGA
GGTTTTGTACACGCAAGGAGGTTATTTTAACCTCCTTGGTACACGTAATT
CAAATACCATCAGATCCGTTAACATCCCCCTCGCCTGCAGGTTCCCCGTG
CGTACGTCAACTTGGTGAATATGTTGGACATCGCTGAGCTGAACAAGGGA
CAGCTCACCTTCACCTGTCGTCTACTGTCCGCGTAAGTATGACGTCACCT
CCAAGCAGATGTAGGGCTATGTCAAAACTTTAACCTTTTTGGACGCGGGT
TTGCTGTATACATGCTGCTCTCTCTGCTTAGCAATCAGCTCTACTCGGAA
AGATTTTGAAAACTGATTCGCCATCATCAATTCCTCCTAATTGCACTATT
TCAATTAACGTTAACGCATCAGCGAGTTAGTCGAAGATGAAATGCATAGT
TCATAGAAAATACCACCAACACATCCGATAGTGCTTCTAACGGTGTTTCT
ATGTCATCATATTTTTTTTGGCTCTGCAGTTTCCTGTGCGACTGTGTGAC
GTACGCTGATAACAACGCTCTGAATGAGATCCGAGATATCAACAGTCAGT
ACCAGGTGAGGAGGCATGCTCTTGTATTTTACACAGTATTTGGAACTTAA
CAGTACTAGTTGAGAATTTCAAGACGCAGAGATTTCTGCATCTTAGCTTC
CGTTTAACCTCCTAAGTCACTGTGTATGCTATTCAATTGTATGATTCTTC
CAAAGATTGAATATTGTGATACTGTTTGGGCCAACTGTGGGAAAACTCTC
TCTGACAATGTCCAGAAACTTCAAAACCGAGCAGCACGGTTTGTCCTCGG
TCTGTCACGTACAGCACATGTGGATAATGTACAGTTGTCTGTTTTAGGTT
GGAGTTCCCTCGCATCTCGCCGGCAAATGCACCTCCTGCAAACTGTTTTT
AAATCTATTCACCAACAAGTGCCAGAATACCTACAGATATTTGTCAGAAC
ATCTCACACTTATGCAACAAGACATAATTCAAACTTATCTTTGCAACTCC
CGAAAGTCAGCCTAGAATCTGGTAGGAGAAAATATGCGTTCAGGGGTGCA
TTTGCCTAGAATGAGTTGCCGGCCACAGTTAGAGCGGCTACGTCGGGCCA
AACTTTTAAAAAACAAGTAAGACAGTACTGCTGACCTCTGACCTCCAGAC
CCGGCCTGCCATATCGACTATGATTTAAGGATTATGATTTGGATTCGACG
CTCGTTTATGTATATATTATCTTTTTTGGTTACTTTCTGTTCATTATTCT
ATGTTATTTACTTGTTATGTTATTTAGTCTGTTTATGTTATTTTGTACAG
GGCACGCCTAAAAAGCAGTGCGGTTAGCACTGAGTGCGTCCACCCTGGAT
AAAGAAATCAGAAATAAATAAATAAATAAATCTTTGCCCCACTGCTTGGC
CATATCTATAGACGAAATTCCGTGGTTTCAGAGGGCAGAGGTTCGAGACC
CGCTAATCACAGCTGTGATGAGTTACATTGGTCCATTCGGATGGGGACTT
AAAGCCGTATATGTGGGAGCTTCAGGCGTTAGCCCCGGGTGTTAAACTTT
GCGCGTAAAAGACCCCAGCACACTTGTAGAGAAGCTAGAGTGAGCCGTGC
GAGCCACGTTGCACTACCAGCCATAGAAAAACTGTAACACTTAGCCTCAT
CTTGAGAACGACCGCTTTACCTTTTTCTTTTGTTGTTGATCGTGTTATAA
CCATCTGGAATCCCACTTGCTTAATTCTTTCACAGGACTCCCTGCGGGAG
CTGGTGAACTCCGGCCGGTACGACACCCGTGAAGACTTCACCGTGGTGCT
GCAGCCGTTCTTCGAGAACACCCCCATCCCACTCAGCTCCAGCGGGGTAA
GTTAGTTGTTATCACAGTTTTAAACCAGCTAACCAAGTTAACAAACCATT
AGCTACACATGATTAATGTTTTAGTTTATTATTTTGTTAGGTAAACATGA
AGTTGTATATGTTGAACGATGGTCGTTGTGAAGTATTATTTTTGGCTCAT
CTGTCTGTTTGTGTCTGTGTGTGTGTGTGTCTGTGTGTGTGTGTATGTGC
GTGTGTGTGTGTGACTGTGTGTGTGTGTGTGTGCGCGCGCATGCGTGTGT
ACATAATGCAGCGTTGCCATACATGCTCAGTGCTGCAATATTGATAGTCC
CAAAGCAACAAGTCTGCCATGATTTTGCCATCTCTGATTGCTTAAACGAT
TTATGTCTGCGGTACACCACATCGATGTTTCTTGACCGTGTTTTTCAGAC
CGGCGAGGCGGATCTGAGTTACTTCTCTCCTGACTGCTTCCACTTCAGCG
GCAAGGCCCACGCCGAGGCCGCCGAGGCGCTGTGGAACAACATGGTGACA
GCCTTTTCCTCATTTTGTTCTAGCTCTATTTCTGGATTATGCAAAATTAT
GAATATAAAAAAAAGAAAAGAAAACTTTTTGAACACTTCAATCATAGGTT
GGTAAGTACTTGCAATTGCATGTTGTTTTGCCACGTCCTTTTCTAAGCTT
TGGCTACTTTGGCTACTTGATTACCTCCAGTAGCTATCATACAAGTAACA
AACAAACAAACAAGTAAGTAGCTAATCCTCCTGGAGTTCAAATAAAACAA
ACATACATCTGACAAACTACATTAAATATGCGATAGCAATTTACATTGCT
GCCATTACATTCGACCATTATTGTAACGAGATATGTGTCTCTTTTCCTCA
GCTGGAGGGTGAGGGACAGAAGTCCGATAGTTGGACCCTTGGCAGGGATG
TGAACTGCCCCAGTGCCGTAAGTAGAGCTAAGCTATTCACTTGCTCCCTA
TGTGTGCTTTTGTGATGCTTGAACTGTAGCTATAGCCCCTGAGAAAAGGG
TCTGATTACACATTTAGAGAGTATGCATTCTTTGGAAATAGCGTGTGTAT
ATGTGACCGAGTTAACCGGAGTGATGAAAAATTCTAGTCTCAAAGCAGAT
CTATCATCGGTGGCAAGGCGGTATCAAGGGCCAACAGAATCGCAACAGAA
CTGAGGGGATAAACGTCAGTGAAGTCTTTCACTGCACTTTCTGCAGCAGA
GCCTGTCGTGCTAGAATTGGACTCATTAGTCATGAGAGGCACTGCAAAGC
TAGGACTCCCCAGAGTGATCATGACTGACTGCTAAGCTGAGAAATCGACT
GAAGCTGCCGACCGTCTTCAGAGACGACAAGAGCCAAAGATGGCCCATTT
TTGATACTGCCTTGCCGCCTATAATACATCTGCTCGGAAATTAGAAAATT
TGAAAATGACTACCATTTACATGTATTATGTTAAACTGTACTGTTACTTA
CTCCTAAACAGCACACCTTGCCTTCAGCTACATATGACGAAAAGCATTTG
GTAAAAATAACCTACATGTACAGTTTGAGCTTAAGATAGATATTAGGGAG
TGAAAACAGCAATAACTCATAGCTCAATTACCAATTTTTCGATGAAGAGG
GAGGGGTATCTGCCTTAAAACCTGACATCTTTCATGCCTAATTCATGATT
GTTCTTTACTCTTTCTACAGACCAATCCTTATCTGAGGACCAGGCTGAAC
TAATGACGTCAACATTTCCGTTGCCATGCCAACGAACGGGAAGAGCCGAT
CTTCAGTTTGCAATCAACTCCAAATTCAGCACAACTTAACATGCTTAGTG
TTGAACAGTTCCAAATAAATCTTACCTTATCTTACTATCAAACC Coding sequence (CDS) from alignment at Sc0000050:806965..814758- >BlTCONS00063135 ID=BlTCONS00063135|Name=BlTCONS00063135|organism=Branchiostoma lanceolatum|type=CDS|length=981bp|location=Sequence derived from alignment at Sc0000050:806965..814758- (Branchiostoma lanceolatum)
CGACTTGTCGAAGGGTTTTCCTCCAGATTTCACCAGCTCCGCCCCTCTGA
CATCAACGTGGTTGCCGCACTGGGAGACTCCATCACCGCAGCTAACGGTG
CGCTGGCCGGCAACGTTCTGGAGGTTCTGACTGAGTACCGAGGCGCCTCC
TGGAGCATCGGCGGCGATGGTACCCTGGAGGACACCGTCACTCTTGCAAA
TATCATCAAGAAGTTCAACCCCAGCGTGAAGGGATTCTCCTTCGGAACTG
GAAATGTCTACAGTTCCGGCTCCAAGCTCAACGTCGCCTACCCGGGAAAG
GAGGCAATCGATATGCCGGGCCAGGCAGATGAGTTGGTTAGTCGTCTGCA
GAACTCGGTGGAGATTGACTACCAGAACGACTGGAAGGTGATCACCCTGT
TCATCGGCGGGAACGACCTGTGCGCGTACTGCGACGACAAGAACCTCAGG
AGCCCAGCCAACTACCAGGGCTTCATCCGGGAGGCGCTGGACAAGCTGCA
CGCGCAGGTTCCCCGTGCGTACGTCAACTTGGTGAATATGTTGGACATCG
CTGAGCTGAACAAGGGACAGCTCACCTTCACCTGTCGTCTACTGTCCGCT
TTCCTGTGCGACTGTGTGACGTACGCTGATAACAACGCTCTGAATGAGAT
CCGAGATATCAACAGTCAGTACCAGGACTCCCTGCGGGAGCTGGTGAACT
CCGGCCGGTACGACACCCGTGAAGACTTCACCGTGGTGCTGCAGCCGTTC
TTCGAGAACACCCCCATCCCACTCAGCTCCAGCGGGACCGGCGAGGCGGA
TCTGAGTTACTTCTCTCCTGACTGCTTCCACTTCAGCGGCAAGGCCCACG
CCGAGGCCGCCGAGGCGCTGTGGAACAACATGCTGGAGGGTGAGGGACAG
AAGTCCGATAGTTGGACCCTTGGCAGGGATGTGAACTGCCCCAGTGCCAC
CAATCCTTATCTGAGGACCAGGCTGAACTAA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| BlTCONS00063135-exon-Sc0000050-1564993656:814729..814758 | BlTCONS00063135-exon-Sc0000050-1564993656:814729..814758 | Branchiostoma lanceolatum | exon |
| BlTCONS00063135-exon-Sc0000050-1564993656:814553..814611 | BlTCONS00063135-exon-Sc0000050-1564993656:814553..814611 | Branchiostoma lanceolatum | exon |
| BlTCONS00063135-exon-Sc0000050-1564993656:814172..814239 | BlTCONS00063135-exon-Sc0000050-1564993656:814172..814239 | Branchiostoma lanceolatum | exon |
| BlTCONS00063135-exon-Sc0000050-1564993656:813522..813565 | BlTCONS00063135-exon-Sc0000050-1564993656:813522..813565 | Branchiostoma lanceolatum | exon |
| BlTCONS00063135-exon-Sc0000050-1564993656:811851..811959 | BlTCONS00063135-exon-Sc0000050-1564993656:811851..811959 | Branchiostoma lanceolatum | exon |
| BlTCONS00063135-exon-Sc0000050-1564993656:811560..811611 | BlTCONS00063135-exon-Sc0000050-1564993656:811560..811611 | Branchiostoma lanceolatum | exon |
| BlTCONS00063135-exon-Sc0000050-1564993656:811221..811367 | BlTCONS00063135-exon-Sc0000050-1564993656:811221..811367 | Branchiostoma lanceolatum | exon |
| BlTCONS00063135-exon-Sc0000050-1564993656:810477..810568 | BlTCONS00063135-exon-Sc0000050-1564993656:810477..810568 | Branchiostoma lanceolatum | exon |
| BlTCONS00063135-exon-Sc0000050-1564993656:810104..810179 | BlTCONS00063135-exon-Sc0000050-1564993656:810104..810179 | Branchiostoma lanceolatum | exon |
| BlTCONS00063135-exon-Sc0000050-1564993656:808813..808923 | BlTCONS00063135-exon-Sc0000050-1564993656:808813..808923 | Branchiostoma lanceolatum | exon |
| BlTCONS00063135-exon-Sc0000050-1564993656:808315..808410 | BlTCONS00063135-exon-Sc0000050-1564993656:808315..808410 | Branchiostoma lanceolatum | exon |
| BlTCONS00063135-exon-Sc0000050-1564993656:807892..807957 | BlTCONS00063135-exon-Sc0000050-1564993656:807892..807957 | Branchiostoma lanceolatum | exon |
| BlTCONS00063135-exon-Sc0000050-1564993656:806965..807138 | BlTCONS00063135-exon-Sc0000050-1564993656:806965..807138 | Branchiostoma lanceolatum | exon |
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000050 | genome | Sc0000050:806965..814758 - |
Properties
| Property Name | Value |
|---|
| GeneID | BlCUFF030937 |
|
