BlTCONS00062996 (mRNA) - B. lanceolatum

Overview
NameBlTCONS00062996
Unique NameBlTCONS00062996
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



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Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000050:133205..134578-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>BlTCONS00062996 ID=BlTCONS00062996|Name=BlTCONS00062996|organism=Branchiostoma lanceolatum|type=mRNA|length=1374bp|location=Sequence derived from alignment at Sc0000050:133205..134578- (Branchiostoma lanceolatum)
CAGGTTTACTTTGGCAAGACCACCGATGTGACCGGAGTGGCCATCAGCGG
AGGGGGCTATGCATGGGGCATGGGCAGTTGGGTGACGTCATTCACCCTAG
CCTTCAGTATGGACGGCGATTCTTGGACGCCGTACGGAGGCAGCGACGGG
AACGTGCAGGTATGGCGGGTTGATCTTCACCCCCTCTGGCGGAACATACA
GAACCTGCAGTGTAGAAAAATGCAGACTGGGACACGCTCGCGCACACACA
TTGCACATACAGATACACAGAGACACACACAGTACACAGAAAGAGAGACA
CACACATATATACAAACACATACATATGCAAACACACATACATTCACACA
CACACACACACACACACAAACAAACAAACACAAACACAGAGAAGTAGAGA
TATGCACGAACAGACACACATACTAACCAGGGGTAACTAGATTTAGCCAA
ACTCTAAAGACCTAACAGGTGTCATGACATGCAGTCAATTCGCAATTTCG
GTAGAGGTATTTTGTTCCTTAGCATATTGCAGATTACTCCCCACCTCCAC
CATTCAAACACACACACAAACGAACTCACACACACGGAGAAACGGACACA
GACGAGCCAAATTTCCTAACTGTCTGAATCCTTTCTTTACCTGTATCTTT
ACCTTTTGCACAGGTGTTCCAGGGAAACAAAGACCCGCACAGCAAAGTGA
GTCGCCCTCTGGACAACCCTGTGACGTCACGCTACCTCCGCCTGTGCCCG
ACAGGTTACCACGGTTGGGTCGCCCTGAAAATGGAGGTGTACGTCACGAA
CGGTTAGTAGCGTGCGTAGTCCAGTGGTTAGTGCCCCTGCCCCTGAACCA
AGAAGCTGTGAGTGCGCAATCCCGCTGTATGTGTCACTCACCCGGCATGC
GCGCTACTGTTCACTGTGCTTGTCGAAAAGAGCTAGGGGAATTTCCCCTG
TACAATGAACCTGTAAGCGTCTGTCTTCACTGTCACAACCTGAGGAAGAA
CACCTCTCTAGTGAGCTAAACTGGTTCGAGATCACTTCTTCACTTTCTTT
CGCTAAACGGGTGCAGGTCTAGCAGAAATGACAATAATGATTACTGACGT
CCATATAAGAAATTCAATGTAGACATGATGGCTTCTGTTGGGGGTAACGA
CGACAAACAGTGACAGTCAAAACTGTCTATAGTTACCAGTTACTACCCAT
AGGAGTTTGGACGTCGTTAGCGTCTTACAGAGGTTTTACAGAGAGAACTT
TAAGACAAATCTAAACAGCAGAAGTGTAATGTTTTTCAGACGAAGACACC
TGGTTGGAGCAGGGAGAGTACACTTCACTGGTGGCCGACCCTGACCCCTT
ACATCCCCGGGCATTCAAGCGGGT

Coding sequence (CDS) from alignment at Sc0000050:133205..134578-

>BlTCONS00062996 ID=BlTCONS00062996|Name=BlTCONS00062996|organism=Branchiostoma lanceolatum|type=CDS|length=381bp|location=Sequence derived from alignment at Sc0000050:133205..134578- (Branchiostoma lanceolatum)
CAGGTTTACTTTGGCAAGACCACCGATGTGACCGGAGTGGCCATCAGCGG
AGGGGGCTATGCATGGGGCATGGGCAGTTGGGTGACGTCATTCACCCTAG
CCTTCAGTATGGACGGCGATTCTTGGACGCCGTACGGAGGCAGCGACGGG
AACGTGCAGGTGTTCCAGGGAAACAAAGACCCGCACAGCAAAGTGAGTCG
CCCTCTGGACAACCCTGTGACGTCACGCTACCTCCGCCTGTGCCCGACAG
GTTACCACGGTTGGGTCGCCCTGAAAATGGAGGTGTACGTCACGAACGAC
GAAGACACCTGGTTGGAGCAGGGAGAGTACACTTCACTGGTGGCCGACCC
TGACCCCTTACATCCCCGGGCATTCAAGCGG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00062996BlTCONS00062996-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00062996-exon-Sc0000050-1564993656:134420..134578BlTCONS00062996-exon-Sc0000050-1564993656:134420..134578Branchiostoma lanceolatumexon
BlTCONS00062996-exon-Sc0000050-1564993656:133777..133915BlTCONS00062996-exon-Sc0000050-1564993656:133777..133915Branchiostoma lanceolatumexon
BlTCONS00062996-exon-Sc0000050-1564993656:133205..133289BlTCONS00062996-exon-Sc0000050-1564993656:133205..133289Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000050genomeSc0000050:133205..134578 -
Properties
Property NameValue
GeneIDBlCUFF030907