BlTCONS00062995 (mRNA) - B. lanceolatum

Overview
NameBlTCONS00062995
Unique NameBlTCONS00062995
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000050:127167..129074-

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>BlTCONS00062995 ID=BlTCONS00062995|Name=BlTCONS00062995|organism=Branchiostoma lanceolatum|type=mRNA|length=1908bp|location=Sequence derived from alignment at Sc0000050:127167..129074- (Branchiostoma lanceolatum)
TGCACTCCGGACCCGCTCCAGCCGGCAGGAGGTTGAAGAGAGCCTCTGAA AGGTACCTCGACACCCAGCCTCAATCCGGTGACATGCACTCCGGACCCGC TCCAGCCGGCAGGAGGTTGAAGAGAGCCTCTGAAAAATACCACGACACCC AGGCTTGTGACGGCATCAATGACTGCTCGACGGGAAAGGACGAGGCTAAC TGTGAAGAAATGGGTAAGTCGGCCAAGTTCAATGTCCTCATATGCCCTCA ATTAGACATAGCAAAACTATGCTGGTCTAGATATTTACATGTACAAAAAA GAAGTCGAACACAGTAACTTATTATTGTACGACTAACAGTTATGGTTATT AGATCTAAAACGCTTTTTTCTTTCTTCCGACCTTCCTTGTTATTAATGTA TAATGAGCATATTTTCCTTCTCTGTTACTAGAACTCAAGCATTCATTATC ATTTTATCACGAACATCCACATGTATTCCATTTTTGTATACAGTTAACTA GATCATTCATTTATTCATTCATTCATTCATTCATTCACTTATTCATTCAT TGTTCCCGTGACAGAGTGTGTGCTGCGCTGTGAGACGGAGTCAGGTGACC CGTGTATTCCCAAGAGATGGATCTGTGACAACACCGCGGACTGTCTGCAT GGGGAGGATGAAGAGGAGTGCAAGAATGAGAAAGGTAAATATCAGATTGG TTACTAATGAAGATAGTTACATGTAAACCCATCACCTTCAACTTGCCCCA TCCTCATCTTGAGGGTCGGGGACCATGGTCGCCTTCAGCACAAGCTTCCT CCATCCTTCCCTGTCCTACGTCCTCTGTGTATAGTTTGCCAGTGACCTTC CTGTCCAGTCCCTGATGCCATCTCCCCATCTCCTGTGTGGCCTCCCCTGC TTCTGGTGCCACAGATCTTCCCTTTACCTTAACATTGGTGAATAGTTTAA TCAGGTTAATGATCTCTGGTTATAGAGACCATTAACATACAAGCAATGTC TTTCACATGCCGACGCTTCGATGGACCGCTGCCTATTTCACGGAGGTATG AAATCTTCAACTTCTTATATTTCCTGCAGCATCCAGGGGCTGCTTTTTCA AGTGTATGAACACAGCCGCTTTTGTGGCGGAGATTTGCGTCCCACCACAC CAGCTAGCGGACGGCCAGGAGAACTGCAGGCAGGGAGAAGACGAAGATCC AAGACAGGGTAAGAGGTAACCTGGTCTTCGGTGTCTAGCGGCCCATAGGT CAGCAGGTTTACTATAGCAGGGTATATTTTTACTGGGAGGGGTTGCTAGC CCTCCCCCCTTTAACGTGCTCGAGGCAACTCCTCAAACACAAGACCCCCA TTTTACGCCCCTTCCGAAAGACGGGTGCAGCCCCAACCGAGATGCTCCTC CCAGGATTTGAACCTGGGTCTCCAGTCTCTCCCAGGGCTGTAGGCTTGGT TTTATCGGCACTGTAAGCTTCTGTCCCGCCTGTCCAACTTAGCCAACATC GGAGACTTGACCAGTCTCTCCAAGGGCAGTTATACTAGTGGAGCATCCCT GTAGTTCTACAGTACTGGTACATAGTAGCAGACTCACAATAATAACTAAA AATATAACCTGCTACAGAAACGGAAAGGAAACATGCTGCCCTATGTGCCA CTAGACACTACAGGGGCCTGAACGAAGGAACGAACGAAGTCTTCTATTAG TATACATACTCCAACCTTTTGGACTCTATCTGTAACTGCTAAAAACTGGT CCTGGCTGACGATTGTACGAATTTTGGATTACAGTTGAACTGGCTCTGGA AACCTGGTTCGGTTCCTGTAGCTACGACTGCCCGTCCGTCTACGGTAACG CGTCCTGCGTCCCGGACTTGTTCGTCTGTGACGGGACCGCCGACTGCTTG GGCGAGGA

Coding sequence (CDS) from alignment at Sc0000050:127167..129074-

>BlTCONS00062995 ID=BlTCONS00062995|Name=BlTCONS00062995|organism=Branchiostoma lanceolatum|type=CDS|length=582bp|location=Sequence derived from alignment at Sc0000050:127167..129074- (Branchiostoma lanceolatum)
CACTCCGGACCCGCTCCAGCCGGCAGGAGGTTGAAGAGAGCCTCTGAAAG
GTACCTCGACACCCAGCCTCAATCCGGTGACATGCACTCCGGACCCGCTC
CAGCCGGCAGGAGGTTGAAGAGAGCCTCTGAAAAATACCACGACACCCAG
GCTTGTGACGGCATCAATGACTGCTCGACGGGAAAGGACGAGGCTAACTG
TGAAGAAATGGAGTGTGTGCTGCGCTGTGAGACGGAGTCAGGTGACCCGT
GTATTCCCAAGAGATGGATCTGTGACAACACCGCGGACTGTCTGCATGGG
GAGGATGAAGAGGAGTGCAAGAATGAGAAAGCATCCAGGGGCTGCTTTTT
CAAGTGTATGAACACAGCCGCTTTTGTGGCGGAGATTTGCGTCCCACCAC
ACCAGCTAGCGGACGGCCAGGAGAACTGCAGGCAGGGAGAAGACGAAGAT
CCAAGACAGGTTGAACTGGCTCTGGAAACCTGGTTCGGTTCCTGTAGCTA
CGACTGCCCGTCCGTCTACGGTAACGCGTCCTGCGTCCCGGACTTGTTCG
TCTGTGACGGGACCGCCGACTGCTTGGGCGAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00062995BlTCONS00062995-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00062995-exon-Sc0000050-1564993656:128862..129074BlTCONS00062995-exon-Sc0000050-1564993656:128862..129074Branchiostoma lanceolatumexon
BlTCONS00062995-exon-Sc0000050-1564993656:128391..128510BlTCONS00062995-exon-Sc0000050-1564993656:128391..128510Branchiostoma lanceolatumexon
BlTCONS00062995-exon-Sc0000050-1564993656:127867..127995BlTCONS00062995-exon-Sc0000050-1564993656:127867..127995Branchiostoma lanceolatumexon
BlTCONS00062995-exon-Sc0000050-1564993656:127167..127290BlTCONS00062995-exon-Sc0000050-1564993656:127167..127290Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000050genomeSc0000050:127167..129074 -
Properties
Property NameValue
GeneIDBlCUFF030906