BlTCONS00062908 (mRNA) - B. lanceolatum

Overview
NameBlTCONS00062908
Unique NameBlTCONS00062908
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



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Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000050:1637501..1638838+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>BlTCONS00062908 ID=BlTCONS00062908|Name=BlTCONS00062908|organism=Branchiostoma lanceolatum|type=mRNA|length=1338bp|location=Sequence derived from alignment at Sc0000050:1637501..1638838+ (Branchiostoma lanceolatum)
NNNTGTGACCAGTGTGACTATGCTGCTGCACAGTCAAATGCCTTAAATGC
ACACAAGTTGAGACATGCCATAGAGAAGCCCTATGTGTGTGAGGAGTGCG
GTTACAAGACAGCTGTTAAGAGAGACCTGGCTATACATATGAGAAGGCAC
ATTGGTATGAAACCCTACAAATGCCATCAATGCGACTATTCTGCTGTACA
GAAACATGATGTGCAAAAACACATCATGTCCCAACACACGGGTGAGAAAC
CCTACGTCTGTGGGGAATGTGGACATAGAACAGCTACAAAATCTCAACAA
AACTGTCACATGAAAACACATACGGGTGAAAAACCACACAAATGTGACCA
GTGTGACTATTCTGCTGCACAAAAAGCCCACCTGGACAAACATATCTTGA
GGAGACACACCAGTGAGAAATCCTTCCTATGTGAGGAGTGCGGCTTCAGG
ACAGCTGTTAAGTCCGACTTAGCCCTACATAGGAAAACACACACTGGAGA
GAAAGTCCACAAATGTGACCAATGTGACTATTCTACTTCACGTAAATGCG
ATTTAGACAGACACTTAATAGTTAAACACAAGAGACCATCAGAGAAACTC
TACGCTTGTGGGGAGTGTGGATACAAAACAGCTATAAAACCCTACCTAAC
CCGACACATGAAGAAACACAGCGGTGAAAAACCTTACAAATGTGACCAGT
GTGACTATTCTGCCGCACAGAAAGGTAATCTGAAGAAACATGTCATGACC
AAACACACCGGGGAGGAACCCTAATGTGTGGGAAGTGTGTAGATCTATAG
ATACATGCACAATGGCTTATAGAATTGTCATTTGTGAGGTAAGGTATTTA
TGTGAGAAATACATTGGACAAAATGTGATCATTGCAACTATTGTGCTGCA
TATGAAAGGCAACGTAGACCGAAACGTATAGCTAAATGCACTGGTGTGAA
ACTGGAACATGTTGTTTGTCTCACCTTGTTTTAAACTCATTGTAAATAAA
CATTACTTCAAATCATCTGTTCACCCCGTGGTCTTTATTTTAACAAAGCG
TTATTCTCTGTTATGTTGCTTAGAAGTTAGATAGACTAACCTGTGTTTGT
ATATCGGTTTCTTGTCATTGCTATGTTCTAGGTAGTACATACTTGATTTT
GTTGATGTAAAGCCACTAGATGGGTTGATGTCTGTACTTATGATATTCTT
TAACATTGAGTTCATGAATGGAAAAATACATACCCATATATATGAACACA
TGCACTCACATCATATGTGAAGGTGCACTTCTTGAGATATTCTCTTTCAA
AGTCTTAAACAAAATCGTCCGGTGCAATTCCGTAAAAG

Coding sequence (CDS) from alignment at Sc0000050:1637501..1638838+

>BlTCONS00062908 ID=BlTCONS00062908|Name=BlTCONS00062908|organism=Branchiostoma lanceolatum|type=CDS|length=774bp|location=Sequence derived from alignment at Sc0000050:1637501..1638838+ (Branchiostoma lanceolatum)
NNNTGTGACCAGTGTGACTATGCTGCTGCACAGTCAAATGCCTTAAATGC
ACACAAGTTGAGACATGCCATAGAGAAGCCCTATGTGTGTGAGGAGTGCG
GTTACAAGACAGCTGTTAAGAGAGACCTGGCTATACATATGAGAAGGCAC
ATTGGTATGAAACCCTACAAATGCCATCAATGCGACTATTCTGCTGTACA
GAAACATGATGTGCAAAAACACATCATGTCCCAACACACGGGTGAGAAAC
CCTACGTCTGTGGGGAATGTGGACATAGAACAGCTACAAAATCTCAACAA
AACTGTCACATGAAAACACATACGGGTGAAAAACCACACAAATGTGACCA
GTGTGACTATTCTGCTGCACAAAAAGCCCACCTGGACAAACATATCTTGA
GGAGACACACCAGTGAGAAATCCTTCCTATGTGAGGAGTGCGGCTTCAGG
ACAGCTGTTAAGTCCGACTTAGCCCTACATAGGAAAACACACACTGGAGA
GAAAGTCCACAAATGTGACCAATGTGACTATTCTACTTCACGTAAATGCG
ATTTAGACAGACACTTAATAGTTAAACACAAGAGACCATCAGAGAAACTC
TACGCTTGTGGGGAGTGTGGATACAAAACAGCTATAAAACCCTACCTAAC
CCGACACATGAAGAAACACAGCGGTGAAAAACCTTACAAATGTGACCAGT
GTGACTATTCTGCCGCACAGAAAGGTAATCTGAAGAAACATGTCATGACC
AAACACACCGGGGAGGAACCCTAA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00062908-exon-Sc0000050-1564993656:1637501..1638838BlTCONS00062908-exon-Sc0000050-1564993656:1637501..1638838Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00062908BlTCONS00062908-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000050genomeSc0000050:1637501..1638838 +
Properties
Property NameValue
GeneIDBlCUFF030878