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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000050:1324845..1329489+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00062848 ID=BlTCONS00062848|Name=BlTCONS00062848|organism=Branchiostoma lanceolatum|type=mRNA|length=4645bp|location=Sequence derived from alignment at Sc0000050:1324845..1329489+ (Branchiostoma lanceolatum)
GACCAACAAACGTTATATGACCTTTGAACTTTCGGTCATACTTTTCCAAA
CGCACTTCCTGAAGTCATGGCTTCCGCTCTGATCAAGGAAATCAGTGACG
ACTTCCTTGCATGCCAGATATGTCTCGAGACATTCCGTCAACCCAAGAGC
TTGGAATGTCTTCATTCATTCTGCGAGGAGTGTCTGAAAGTGTACGGTAA
GAAGGCAGGAAGTAAGCTACTCTGTCCAACATGCCGACGTGAGACCCCCC
TCCCAAGCGATGGCGTACGAGGTTTGAAGACCAACTTCTTTCTCATAAAT
CTCGTGGACACTGTCGGGGCACGCAACAAGGTCGTGAAGGGGGCAGAGAA
GATTCCGTGCGACAGTTGTAGCAGCGGTGCCCCAGGTACGGCGCGATGTG
TCAACTGTGCGGATTTCTTATGTCAAAAGTGCGTCCAAATCCACCGAGAT
CTCAAAGTGTTCCGGGGCCATGTTGTCGCCAGTTTCGCTGATCTCCAGTC
GGGAAGGTTCGACATTTCCCCATCGGAAAGCCCGAGGAACGAGCCTACGT
GTGACAGACATACCGGTGAGAAGATGAGGTTTTACTGCAAGACTTGCCAA
GAGGCTATTTGTCACAACTGCACGGTGTTGGACCACCCGAAACCGGAACA
CGCGATTAGAGACATCCACAGCGTGGCGCTCGAACAAAGGGAGATCATGA
GCGCCCTGCAAGTCACCGCCGAGACGAAACTCACAGAGCTAGAGAAGACA
TCGACATCTCTGGACTCTGAGCTGAAGCATTTAGAGAAAAGGCGAGACAT
GCGTCGTCAGGAACTGAAGAAAAAGGTGAGCGGTCTTACCAGTGCGATAG
AGAAGCTTGGAAAGCAATGCGAAGAAACGATACAGAAGGAGTTTGTTCTT
AACGAGAAAACAAGCGTCGCTAGGAGACAGGAAGTCGACATGGTGAAGTG
CAGACTTGAGAGTACCCGAGAGTTCGTCGCGAATATTTTATCGCACGGTT
CCGACGCTGAGATTGCAGCAACATTCAAGCAAGTTGAAGACTCGATAGTC
GAACTGACTTCAAGTACAAGGTCGTGTAGGACGGAGGAGGACCAAGACAT
GGCTGCAAAGAGCGTGGACTTCGGAGCGTCGCCAACTTTTCAGCTCTTTA
AAAGGATGAAGGAAATAATCACAGAGGAACAACGCAGCATACAAACCCAA
GCGTGGGGAGAAACAAGTAAGGAACTTAGAGCTCTTGGAGGTACAGAAAG
GCCATGTTTAGCTTTGGTAGTTTCTTAGGACAATCTTTTTTAATTATATC
AAATGAGAACCAGGGAATCTAAATGCAGCAGAAAAGTCTTATTAGGAAAC
TAGTTATATTCTTACCTCCGTCAATGCGGTTATCATTCGGTGCTGTTTCT
CTCTGTATGTCTCTCTCTCTCTCTCTCACTCTGTACGCTTCTGTCTCCCT
CTATCTCTTTCTTTTTCTCTCTGTCTCTTCTCTGCCTGTCCCTCTCTCTC
TGCCTGTCTCTGTGTCTGTCGCTCTGCCTGTCTATCTCTGTCTCTATCTT
TCTGTCTGCCTCTTTCTCTCCCTGTAGTTAGATACTTATTGGTTATGATT
CCGGTACACCTATCATCAAGTTGTTTTTTTTATCCCAATCTGTTTATGAT
TAGATTTTAGGCTCTAAACAATCATGCGCAACATTGACTTACGTGCTCAT
ATCATTCATGATGTAAACACCTCTGTAGAGTAGTGAGAACTACACATAAC
ATCAGCGTTGATTTTTGCCATTCTCTTGCACTCGCTAGTGGAATCCTGCG
GCGCGCATGCTCAGCCCGTGACGTCACCACAGGGCGTCCCCAACCGCCCG
TGGGACCCGTCCCGAATCGTTCTGAAAGGAGTCCCCAAACACGTCACAGA
AGATGAGCTGTGTTTGAATCTTACGACCCTTGGCATTACTGACGTAAAGC
CCCGTTCCCTTGTGTACGGAAGTCGACAGGGAACTGTGATGGTGGAATGT
TCTGATGTCATATCCGGTAAGACTTCCCGACCGGTGATACTAGTATGTTT
GGTGCCGCGGTGCATTATTTGAAAAATGCAAATCCTCCTCTGCTAAGTGC
ATCTCTATTGTTATAGATAGAATAGAATGATCTAATTGAATATTATATAC
ACATGTATTGAAACAGTGACCTATTATTTTCATCACCTCATATAGATAAG
CTTTAACTTTTTCAAATTCTCATAGAAACGTTGGCTTAGCTAATGCTTCA
CTTTGAATCAACACTCTGTATGATGCTCTAACAAAGATCAGCGTAAATTA
TCTTGCATGCACTTACGATTCCATTCCATTTTTATTCAGACTTCACCATC
TGTTGCAAATGGACAAGGCCAAATCTGTAATTTTGGTGACTTTATATTCA
CAGACCTTGACGGAAAACTGAGAGCTATCCACCGCACAAAGTTCTTTGGT
TCAAAGGGCACGGCCGAGAAAGTGCTGGTCTGCGACTGCGTAGAAGTCCA
CAATCTCCCGCCACACGCCAACAACCAATCACTGTTCACCTACTTCAACA
AGCAGCGGCGGAGTGGAGGAGGCGGCGTCATAGAGGTCAAAGTTGATGAG
GACAAGAGGACCGCGTTGGTCTCGTTCCAGAATTACAAAGGTCAAATGTT
TTCTTTTGTTTGATCTTAGTCATTTAGTACGTTCAATAATTGTTATCTTG
GTTCTAAATTGCTATCTTAACTGCATGTCGTTTCCCATAAAACATTGGTG
TGTTTTGAACTGAAACGTTTGTTTTTGTTTATTTGCAGTTGTTGAGCGTG
TTGTCGATCGTCGCCACGTGATGGGCAAAGTCGAGCTTGTAGTGAAGCCC
TTCTACCCCTGCCTTGGGCAGACTGCTTCCGATGCCTAATTGATGACAAT
AAAAACAAAACAAAACTTTTATTATGCACGCCATCATACCCTTGTCTATC
TACACGGATGGGAGACATATTGCTTTTGCTGTTTTTTTTCTTCTTCTTCC
TCTTCTTCTCAAAACAAATCGGGTCAGTGACCTAAACCAGACGTCTGTCA
CCATGGTTACTGGTAAATTAGCAGACATCCTGCGGTGTTAGATTTCGTAA
TGTAGTAAGTGGCAGGACAGAGCTGGAGGGGCTGGTCAGTTTATATATGA
ATGCGCCTGAGTAAGAATAAACAGAGCAGTAGTTTGTTAGGCTGGACCAT
GTGAAGGTAAACATTATGTATTTGCTTGCAAATATTACCTTTCTAGTTCT
TGACAAGAAGAAAGTGCGGGGGAGAAAAGTGTTCTGGATATGAAATGAAT
TTACAGTTACAAATTCACGTGGTCTTTCTTGTGTGTTTTGTCAATTACAT
TGCTAGTCAAATCAGTTTTTTTCTGCCTTGTGTGCATGTGTTCTGTCTAT
TTGTCGGCATAGCCAAAAAGCGCACAAGGCATTGCACAACTTCCTTCGAG
TTGTAAACGAAACGTTGACAAACTTGTTTCTTCAAGCAACGTTCGAAAAA
AAACCCTCCAGAATCACATATCTGGTAAACACTGAAAAGGTTGAATGTGA
CAACAGACGGTCTCACAGCACCACCTATCAACTTGGTTGGTATTGTAATA
TATTCTTCCGCACACAAGGTTTGTGTGCGGCCATTTTTCAGTGTTTTTCA
ACTTTAAGCTTGATCTGTATGAAGGAACTGCTGCTAAGAATCTTTATTCG
ACAGAATATCCAGTCCTTGTGCCTTCCCTTTCTTAATGTCGTTTTCCTTG
TTTGGACGTATTGCTTTTTTGGACGAGTACTTTTTTCATCAAATATGGAC
CAATTGGCATCAAGATTAGCCTCCTTCGCAGACTTCCAGGGAGGTTGGCC
GTAATTATCGGGGGGGGGGGCTGATTCGCATGGGGTCTAGCCGCGCGGAA
ACCATCGCCCCCAGCATTAGAGAACATGGCCGATGTTGAAAATCGCGAAT
CAGCGCACCCCTAAAAGATAAATGCCGGTATTCCTAAAAGTCTGCGAAGG
AGACTTAAGACAGTCTTCTCACCTTTCCCGCCATCTTTCCACCTTTATCC
AGAAATATGATGTGCTGTTTGTGGCTTATGAATCTTTTGCTGTTGCCTTT
TGTGTGTCTGTATGTCAGTCTGTGTTTATAGATATTTTTGCCAAAGAGGC
ATATATCTAGTTCAGCCTGTGCCACCATTTAATGCAGCAAATATTGCTGA
AATATGATTTGATATACGCCGCTAGTGAGCCCACGGATAATCTTTATCCA
AGACAAAAGTATTAATTTGCAAATGTGTTCATTAACATAATTTCATAAAG
GTTAACCACAGGATCTAGAATGGATGCGTCTCAAAAGTCTTACTTGGCTT
TGTTTGTCGATGGCATTGTATCTTTCATATTTTCACGCTAGGAGGTGCTT
TTACCACATGGTATCTACCTAGCCTCCTCTCGGATAGAAGGACCGGCGGC
TCTGTCAAGACCTTTCTGTAAGATGTGACGTGTCACTTGCGTATGTGGGC
TCACCTTGCTCTGACTGCTGTTAAAACCTGGCTAAAACAAGGGAATTTTC
ATTCTTACCAATATAATTGAGATAATAGTGTCTGATCACCAGCGCTCTAA
CCCTACCATTGAAGTGGCTCTTACTTGATCTTCGTTTTTTTTTTT Coding sequence (CDS) from alignment at Sc0000050:1324845..1329489+ >BlTCONS00062848 ID=BlTCONS00062848|Name=BlTCONS00062848|organism=Branchiostoma lanceolatum|type=CDS|length=1740bp|location=Sequence derived from alignment at Sc0000050:1324845..1329489+ (Branchiostoma lanceolatum)
ATGGCTTCCGCTCTGATCAAGGAAATCAGTGACGACTTCCTTGCATGCCA
GATATGTCTCGAGACATTCCGTCAACCCAAGAGCTTGGAATGTCTTCATT
CATTCTGCGAGGAGTGTCTGAAAGTGTACGGTAAGAAGGCAGGAAGTAAG
CTACTCTGTCCAACATGCCGACGTGAGACCCCCCTCCCAAGCGATGGCGT
ACGAGGTTTGAAGACCAACTTCTTTCTCATAAATCTCGTGGACACTGTCG
GGGCACGCAACAAGGTCGTGAAGGGGGCAGAGAAGATTCCGTGCGACAGT
TGTAGCAGCGGTGCCCCAGGTACGGCGCGATGTGTCAACTGTGCGGATTT
CTTATGTCAAAAGTGCGTCCAAATCCACCGAGATCTCAAAGTGTTCCGGG
GCCATGTTGTCGCCAGTTTCGCTGATCTCCAGTCGGGAAGGTTCGACATT
TCCCCATCGGAAAGCCCGAGGAACGAGCCTACGTGTGACAGACATACCGG
TGAGAAGATGAGGTTTTACTGCAAGACTTGCCAAGAGGCTATTTGTCACA
ACTGCACGGTGTTGGACCACCCGAAACCGGAACACGCGATTAGAGACATC
CACAGCGTGGCGCTCGAACAAAGGGAGATCATGAGCGCCCTGCAAGTCAC
CGCCGAGACGAAACTCACAGAGCTAGAGAAGACATCGACATCTCTGGACT
CTGAGCTGAAGCATTTAGAGAAAAGGCGAGACATGCGTCGTCAGGAACTG
AAGAAAAAGGTGAGCGGTCTTACCAGTGCGATAGAGAAGCTTGGAAAGCA
ATGCGAAGAAACGATACAGAAGGAGTTTGTTCTTAACGAGAAAACAAGCG
TCGCTAGGAGACAGGAAGTCGACATGGTGAAGTGCAGACTTGAGAGTACC
CGAGAGTTCGTCGCGAATATTTTATCGCACGGTTCCGACGCTGAGATTGC
AGCAACATTCAAGCAAGTTGAAGACTCGATAGTCGAACTGACTTCAAGTA
CAAGGTCGTGTAGGACGGAGGAGGACCAAGACATGGCTGCAAAGAGCGTG
GACTTCGGAGCGTCGCCAACTTTTCAGCTCTTTAAAAGGATGAAGGAAAT
AATCACAGAGGAACAACGCAGCATACAAACCCAAGCGTGGGGAGAAACAA
GTAAGGAACTTAGAGCTCTTGGAGTGGAATCCTGCGGCGCGCATGCTCAG
CCCGTGACGTCACCACAGGGCGTCCCCAACCGCCCGTGGGACCCGTCCCG
AATCGTTCTGAAAGGAGTCCCCAAACACGTCACAGAAGATGAGCTGTGTT
TGAATCTTACGACCCTTGGCATTACTGACGTAAAGCCCCGTTCCCTTGTG
TACGGAAGTCGACAGGGAACTGTGATGGTGGAATGTTCTGATGTCATATC
CGACCTTGACGGAAAACTGAGAGCTATCCACCGCACAAAGTTCTTTGGTT
CAAAGGGCACGGCCGAGAAAGTGCTGGTCTGCGACTGCGTAGAAGTCCAC
AATCTCCCGCCACACGCCAACAACCAATCACTGTTCACCTACTTCAACAA
GCAGCGGCGGAGTGGAGGAGGCGGCGTCATAGAGGTCAAAGTTGATGAGG
ACAAGAGGACCGCGTTGGTCTCGTTCCAGAATTACAAAGTTGTTGAGCGT
GTTGTCGATCGTCGCCACGTGATGGGCAAAGTCGAGCTTGTAGTGAAGCC
CTTCTACCCCTGCCTTGGGCAGACTGCTTCCGATGCCTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| BlTCONS00062848-exon-Sc0000050-1564993656:1324845..1326084 | BlTCONS00062848-exon-Sc0000050-1564993656:1324845..1326084 | Branchiostoma lanceolatum | exon |
| BlTCONS00062848-exon-Sc0000050-1564993656:1326633..1326860 | BlTCONS00062848-exon-Sc0000050-1564993656:1326633..1326860 | Branchiostoma lanceolatum | exon |
| BlTCONS00062848-exon-Sc0000050-1564993656:1327248..1327484 | BlTCONS00062848-exon-Sc0000050-1564993656:1327248..1327484 | Branchiostoma lanceolatum | exon |
| BlTCONS00062848-exon-Sc0000050-1564993656:1327633..1329489 | BlTCONS00062848-exon-Sc0000050-1564993656:1327633..1329489 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000050 | genome | Sc0000050:1324845..1329489 + |
Properties
| Property Name | Value |
|---|
| GeneID | BlCUFF030842 |
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