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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000050:1320497..1324428+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00062846 ID=BlTCONS00062846|Name=BlTCONS00062846|organism=Branchiostoma lanceolatum|type=mRNA|length=3932bp|location=Sequence derived from alignment at Sc0000050:1320497..1324428+ (Branchiostoma lanceolatum)
TACGACCTTGTGAGATGTCGCAATGCATTCTCGCACAAGCGAGTTTACTA
CGATCTTCCAAAACAGGTATGTTAACACAACGTTTCAGTCATAAAAGACA
GACCGGCAGGGAGTAGGAAAGTAGGAAGGAAAGAGGGCGATAAAGAAATG
AAATATGAGAGAAGCCAATTTTATAACCGTTGCCTTATAGATATACATAT
ATGGCCTCACAGTACTCTGTGTCAACCGAAACCTTACATTATTTGCATTA
CTTGCTTTCTTCAAGAACGTACTCGAGAAAAATACGATTAGACAAAAATA
CGACACGCACGTTTTCTTGTTCTCATTACAGCTAGAAGATGATTTCCTTC
AGGCTATGCAACGTCACGAGTCAAAGGTCAACCCTCTGTCCTTCTTCCCG
CTGGAACGACGAGATGCTCTACTTCTCACGTGGTCTCACGAGACCAACTC
CCGAGAAAAACTGACTGAAGCCTTGCAAGGTAAGTGTCGATTGAATCTAA
CCGCTCACACAAACACACAAACACAAACACACACACACACATAACATATA
CATACAAATGTTCCAACTTCAATGCATATATCTCAATGATAGAAGAAACT
GCTAAAGTGGAATCTCGCATGATTTACAGGGAAGTCAAACATCATCGAGG
CAGACGTCGTGCTAGGAGACCAGAACCAACCAATCATGGCGAAGCCCACC
GATACTGATTATGACGTCACGTTCGAAGAGTGGCTGTCCGCCATCATGGC
GGCTGACCATGACGTGGGGATAAAGCTGACCTTTCACACTACAGAGGCTG
TCATACCGGTACTAACTTTTTTATGATGAGATTCAACAAGACTCATCAAG
AGAGTGGTGTTGCCATCGTTTGAAAGAGAAAAGTGATTATGCAGCATAGT
TCTGTGTGAGAGATAAGATCATAGCGGTGTTAATTCCTTCCAAGATAAAC
CAAAATAAGTGCTCTGATAAACCCTGGTTCAATGAAGATTGTAAATCAGC
AGTCCAAAGTATATCATATAGAGAAATGGCGCATTTAGACGGAGATCTAA
CTTACAGTTTTGATTAATGGAAACTGTCTTCCAGATGTCCTAAGTTCCCG
TTTCACACATTTCTGTATGACCGTCGGTTCGTCTAATGACGTAAACTAGA
AATTATTTTTCTCGGGAACAGCTGGCAACTGGTCAGTTCCTGAAACGTGG
ATCATCTAAAGGACCCCAATAGATGTACCAGACATACTTTGTCCTTTTGC
AAAATAAACAATGACATATTGAAGTCATCCATGACTATATTAACATGAAA
GTTCATCAGTGTTGGTCAATGACATCACGAATAAAAACTCAGTTCAGTAC
TAGCACTTGTAATAAGTCCCACGTCTTCCAAGTATTGGTCTTGTAAAGTT
GATGATCAGTCTTTGGTCATAATGCATCCAATATCATGTCTTTATTGTAC
TTCCACAGACAATGACAATATTGCGTCAAAACATGTCCAAGATTGACTTT
CCTGTGATCATCAATGCGGATGTCTTGGCTCCAAGCTACGAGTCCGGACA
ACCACTTGATCCCGACTTAGTCTTCAAGCCTACTTATGAGCTGTACCCCA
ATGGCGTCACCACTTCCATTCAGTTCAAAGGAATAACACTTGAGGGTGGA
ATCACGCGAGAGATGGCGAGAAATGCACACGCGCTTGCGCAGAGGCTAAG
TAGCCCCGTGACCTTCACGATCCCCGCCGTCGTCGCCATGACGTCATGGC
CGAACGTAAAATGGCTGCTCGAACAGTCTGACACCTACACGTTGACACTT
ACGGGAGGACAAATAAGTATCGATCCTATTGATCTCTTCACGATTCGGAA
CGATTTCGATTGGGGTAGGATTTTGTACGACATTACAACCGAGAAGGCAA
CACAGTTGGCGCGGATGACTGAAACTGGAGGCAGTTTGGTTAATTTCTTC
CAAGCTAGCTACAAAATCTATGGGCGGGATGCCCTATCCGTCACATGGGC
GCATGGCGTAAACTCTAGAGAGACCGTTGAAGATGCCATGGGAGGTTGGT
TGCGTTTAGAAAAAAAATCAAAATGTAATACAAAACACCAAGTATGACAC
CATCAAAATAGTTTACAAGTTATAAGCTCAACATTAGAATAGATCTTACA
TTTTGTCATTTCATAGAATTCAAATAAGTAACATACTTTTAGCTCTATCT
ATCGGTGTAAAACTTGCACTTCTTGCACTTATATGAATAGCGAGCAGTTC
AGGGATCTTCATCTTTTGACGTGTACGACTAACAGGTGTTTCCCCCTGCA
CGTAGCCTATCGTGAGATCACCATGCTCGAGGCTGACGTTGACATCCGGT
CTGACAACGTTCCCGTCATGTCTGACGATGCGTCAGTCGCCGGAAGTGAC
GTCATGACTTTGGAAGAGTGGCTGGACATTGCAAAACTGAGGAAACAGGG
TATCATGCTGGAGTTCCACAGTGTCAACTCGGTAGTTCCTGCTCTGGAGG
TAGGTAAATGTTCATCTACCACTTAAGATACATGAAATTAACTACTCTTA
TTGTACAGTGATAACGTAAAATGTCCCTACATACTTTTTTACAAACTGGA
TGGCAGAAAAATTCTTGCTCAGACAATAATGTTATGTACTATGTTGATGA
AGGTTAGACATCCACAAGATACACAAGATAACAGCTAGTTTGACTACAGA
TCTTGCTTTTCACTGACGAAAAGTAATGGATACTGCCTGGAATGTCTGAC
CGTTTATAAATCTATCCAGTTTCTTGAGTAATTGTTATCTTGTGCATGTT
CAATCCAAGTCAAATTTCAGCCCTACTCCACAACTTCTTATCATCTTTGT
GTCATAAATAGATTTTCCAAAGACGACACGGAGACCTAAGAAGCCCTGTC
ATGTTGAAGGCAAAGATTCCTGGCCTTTTCAGCAAGGAGACATTTATCGA
TCCTATTGTTGATATGTTTCCTCACGTTTCGATAGGTAAGAACTTTGAAG
TCACTTTCAGTTCGCGTTGAATTTGTAGCCTAGGATTTAACACATTGGCA
ATGATCCATAAGAAATAGATGTATTAATCCATTAATAACAGTTGACTTTG
AATAAGATTAGTTTTTATTTTATTTTGCAAACATTGTATTCTAAAATTAC
TAGTAGTAAAAGCTTCCAAATTAACTAATTTGTACGTTGCTTTTTTTTTC
TTCAGTTTTTGCGATGAGACCATCGAGCCCGTCAGAGGGTTACTCTCGTG
CCCAGGTTGAGGAAATATCCCGGATGTGCGCTAACCTGACACAGGTCGTG
ACGTTCAGCGTAGACGCCAGACATGTAAGTCGTGAATTGTCTCTTTGACG
CACATTGGTTTTGTAAGGATGAGGCAGGCACCGTCGTCTCGGTTGATTGG
TGGTTGGTGACAGGAATTCTAAGGACAGTTGAACATTCGATGCGCTAATT
TCTTTTGCTGGAAAAATACTTAACTTTGATCGAAACTATGTTGTATTGAA
TTGAATTGAAACAGGTCAATTTTTGTGTCATTGTAGGTGCGTAGATCGTG
GGACAACCTGAGCTGGCTACTCGGCCAGTCTCCGCTCTACCACCTGTACA
TCTGGGCGGGCTGGCCGGAACCGGAAACGTACAGCGTTGACGTCACCGAC
CTCGTGTTCGTCAGAAACAACTTCGATCACAGCCGGGTGTTCTATGACCT
CATCCCACGGGTCATGGAAGAGTTTAACATGGCTCTGGAAGAAACTAATT
TACGACGGGCAATGATGCACTATAAAAACTGTTAATAAAACTAATAATGT
TTTTTGTAGTTTTGAATGTTAGCCATTTTATTTTTATGGAGGCTAGTCAT
TTTGTTTGCCATTTGCTGAGGAATTACACTTTGTAAGATTTGAAATTTAG
AAATAAAACGTTTCAATTATCTTTTATATCAA Coding sequence (CDS) from alignment at Sc0000050:1320497..1324428+ >BlTCONS00062846 ID=BlTCONS00062846|Name=BlTCONS00062846|organism=Branchiostoma lanceolatum|type=CDS|length=1668bp|location=Sequence derived from alignment at Sc0000050:1320497..1324428+ (Branchiostoma lanceolatum)
TACGACCTTGTGAGATGTCGCAATGCATTCTCGCACAAGCGAGTTTACTA
CGATCTTCCAAAACAGCAGCTAGAAGATGATTTCCTTCAGGCTATGCAAC
GTCACGAGTCAAAGGTCAACCCTCTGTCCTTCTTCCCGCTGGAACGACGA
GATGCTCTACTTCTCACGTGGTCTCACGAGACCAACTCCCGAGAAAAACT
GACTGAAGCCTTGCAAGGGAAGTCAAACATCATCGAGGCAGACGTCGTGC
TAGGAGACCAGAACCAACCAATCATGGCGAAGCCCACCGATACTGATTAT
GACGTCACGTTCGAAGAGTGGCTGTCCGCCATCATGGCGGCTGACCATGA
CGTGGGGATAAAGCTGACCTTTCACACTACAGAGGCTGTCATACCGACAA
TGACAATATTGCGTCAAAACATGTCCAAGATTGACTTTCCTGTGATCATC
AATGCGGATGTCTTGGCTCCAAGCTACGAGTCCGGACAACCACTTGATCC
CGACTTAGTCTTCAAGCCTACTTATGAGCTGTACCCCAATGGCGTCACCA
CTTCCATTCAGTTCAAAGGAATAACACTTGAGGGTGGAATCACGCGAGAG
ATGGCGAGAAATGCACACGCGCTTGCGCAGAGGCTAAGTAGCCCCGTGAC
CTTCACGATCCCCGCCGTCGTCGCCATGACGTCATGGCCGAACGTAAAAT
GGCTGCTCGAACAGTCTGACACCTACACGTTGACACTTACGGGAGGACAA
ATAAGTATCGATCCTATTGATCTCTTCACGATTCGGAACGATTTCGATTG
GGGTAGGATTTTGTACGACATTACAACCGAGAAGGCAACACAGTTGGCGC
GGATGACTGAAACTGGAGGCAGTTTGGTTAATTTCTTCCAAGCTAGCTAC
AAAATCTATGGGCGGGATGCCCTATCCGTCACATGGGCGCATGGCGTAAA
CTCTAGAGAGACCGTTGAAGATGCCATGGGAGCCTATCGTGAGATCACCA
TGCTCGAGGCTGACGTTGACATCCGGTCTGACAACGTTCCCGTCATGTCT
GACGATGCGTCAGTCGCCGGAAGTGACGTCATGACTTTGGAAGAGTGGCT
GGACATTGCAAAACTGAGGAAACAGGGTATCATGCTGGAGTTCCACAGTG
TCAACTCGGTAGTTCCTGCTCTGGAGATTTTCCAAAGACGACACGGAGAC
CTAAGAAGCCCTGTCATGTTGAAGGCAAAGATTCCTGGCCTTTTCAGCAA
GGAGACATTTATCGATCCTATTGTTGATATGTTTCCTCACGTTTCGATAG
TTTTTGCGATGAGACCATCGAGCCCGTCAGAGGGTTACTCTCGTGCCCAG
GTTGAGGAAATATCCCGGATGTGCGCTAACCTGACACAGGTCGTGACGTT
CAGCGTAGACGCCAGACATGTGCGTAGATCGTGGGACAACCTGAGCTGGC
TACTCGGCCAGTCTCCGCTCTACCACCTGTACATCTGGGCGGGCTGGCCG
GAACCGGAAACGTACAGCGTTGACGTCACCGACCTCGTGTTCGTCAGAAA
CAACTTCGATCACAGCCGGGTGTTCTATGACCTCATCCCACGGGTCATGG
AAGAGTTTAACATGGCTCTGGAAGAAACTAATTTACGACGGGCAATGATG
CACTATAAAAACTGTTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| BlTCONS00062846-exon-Sc0000050-1564993656:1320497..1320562 | BlTCONS00062846-exon-Sc0000050-1564993656:1320497..1320562 | Branchiostoma lanceolatum | exon |
| BlTCONS00062846-exon-Sc0000050-1564993656:1320825..1320975 | BlTCONS00062846-exon-Sc0000050-1564993656:1320825..1320975 | Branchiostoma lanceolatum | exon |
| BlTCONS00062846-exon-Sc0000050-1564993656:1321126..1321304 | BlTCONS00062846-exon-Sc0000050-1564993656:1321126..1321304 | Branchiostoma lanceolatum | exon |
| BlTCONS00062846-exon-Sc0000050-1564993656:1321955..1322540 | BlTCONS00062846-exon-Sc0000050-1564993656:1321955..1322540 | Branchiostoma lanceolatum | exon |
| BlTCONS00062846-exon-Sc0000050-1564993656:1322802..1322995 | BlTCONS00062846-exon-Sc0000050-1564993656:1322802..1322995 | Branchiostoma lanceolatum | exon |
| BlTCONS00062846-exon-Sc0000050-1564993656:1323358..1323481 | BlTCONS00062846-exon-Sc0000050-1564993656:1323358..1323481 | Branchiostoma lanceolatum | exon |
| BlTCONS00062846-exon-Sc0000050-1564993656:1323702..1323820 | BlTCONS00062846-exon-Sc0000050-1564993656:1323702..1323820 | Branchiostoma lanceolatum | exon |
| BlTCONS00062846-exon-Sc0000050-1564993656:1324033..1324428 | BlTCONS00062846-exon-Sc0000050-1564993656:1324033..1324428 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000050 | genome | Sc0000050:1320497..1324428 + |
Properties
| Property Name | Value |
|---|
| GeneID | BlCUFF030841 |
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