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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000050:514477..523334+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00062674 ID=BlTCONS00062674|Name=BlTCONS00062674|organism=Branchiostoma lanceolatum|type=mRNA|length=8858bp|location=Sequence derived from alignment at Sc0000050:514477..523334+ (Branchiostoma lanceolatum)
GCTGAAGCCAATAGAGCACCCACAGTACGTAGTGGGTGAAGACATAGGGG
CAATGTAAAATGCTTACAGGTCTCAGCATCGGCTGGGCAAGAGTGTAACT
AGACAAATTCAACCTTTTTACACTGTCTTGCTTCCAGCTGCCGGGCCAGC
CAATGATAGCTTAGAACCAGGTTAGGGCTGCTGACGTCATCACAGAGGGC
GGGGCTTGAATATATAATGAGCATTACTGGTTCAGGTTAAAGGTTAACGG
TTGAAGTTCATTTCCAGAAGTGAAGACGCAGCAGCATTTGGTACTGGTAA
TTCCCTCAAATTCCTCTTGGGTAAATTGATGTGAACGTATTCAATACGCT
TCCTTTTTGGAATAACGTCGAATAATTGGAGTTTTGTATAACGAGGCGGG
CTTCTTTCCAGACAGCGGAGAAGGAAGAGACGGTAGCAGCAAGCGGGGTA
TATTCGTTGATACGACATTTTCTGTAGTTAATTTGATGTAAAAATCACGA
AATTTTGATTCTTTGTGCCCTGGAGGTGTCGAACTTTTTCGGGCATGCGC
GGTCGACCATCCTGAGCGTGATGATGGGGTCGAGCGCCTCCTCTGCTATT
GTCTTCCCCGTTATGAAGGTATAAGGGTTATGACCAAGTGACGAAATCTA
CACAAAATCATTGACAACAATGTGTGCATTGTTCTCTATTCAGGGGGCGG
GAGTCTTATTATTGCACGTTGTGTGCGAAAACAAAATCACAAATTCAGCA
AAATTGAGTATGGGAATTAATAATGGCAAAAAGCTATATAAGTTTGTTTG
CATGGCATCTAAAGGGACAGCGTAAAGAAAGAAATGAGGGTTTGGACTAG
GGAATTTGGAGTTGGCTTTTGGGGTGAGTTGGATGCTGGAATACAAGGAG
AATGAATAAGTATGGTGTTAGCGGTGTGTATGTATGTATGTGTGTGTGTG
TATGGGATGATACTTGGGATTGTTGTGCATTTCTAACACTCTGGGTCTTA
TTGTGTTGCAGGTTCACGACAGTCTCTCTATCCCCGCGTTATACCCGGCA
ATTAAAACCAAATTCACCCAAACAGAAGAATAGCAACAGCTTTTTAAAAT
TCACACACATGCAATTCGACCCTTTGCTGTTACAAAAATTGCAACAAATA
TTCTGGTCAGATTTGACCACTTCATCCGGGGTATAGAGACACTGATTAGA
AAATTTAGAAAAGAGGTATGGCACTAGGTTGATACATATCCATTTCATTC
AGATTGAAAGAAAGAATGCGTTGTATTCTTTTAAACAATACCTTTCTTGC
AAAAAAGTCATAACTGTTTTACAAAAGCCATAACGTCTTTTCCCCTCTTG
TTTTGCCTGCGTTGCTGCCTGCTCCTTCTGCAGGCTTGAGATGGTCAGTT
ATCAGTCTGGCATCACCAAGCCTGTCAATCATAATCAGGAGCAGGCAGTA
ATCAAGAATGATTAGAACGTCGTCCATTATCCGGAAGTGACGTACGATAC
CTTGTTCTTTCTCATGCAGGCAATCTTTGACCTTGGTGTTTCCTTCCGGG
TCATGATGATGGTGATGGCTGCTGGCAGCCTATTGGCGTTCATCAATTGC
GTCATCAACTACCCGTCAGAGCCCGTGCCTGGGCCGGAGACCATGGATTT
CACCATACACACCGGGCTGCTCTTCGGACGGCAGAACAAAATCAGCGGGA
AGAACTTCTACTCTATGGTCACCACTGTCGGCCGGAGGCTTAGTGTCGGG
CACAGCCTGAAAGAGAGTGAAACATACACATCAAAGTAAGGAAGAACTTT
CCTTTCCCTGTGTGCGCACCTCGTACATCAGAATTGAAACATATATACCC
TACGAATAAGGCCTGTATCTATGACATTTGTTTGTGGAAAGACAGCAATG
TACTTTATGAACGTTGCAAATCTAATAGTGTCTAGTAGCCAACAAATAAA
CGATTCTATCCCCCGTTGCAGTCTCCTTCCGGTTGTTTCCTTTCAACTTA
CCATTTTCTTATTGCATTTTTTTCTTATTGCTGGCCGAGAAATAAGGAGG
AAAATGTATATAAGAAAATGATAACTTAGAAGAAAACAGCCGGAAGGAGA
CTGGAACGGAGGCTAAACGACTCCACAGTGAGTAGCATTAGGGATCAATC
AACTTGAAACACGGAAACTTCCCTCTAATCGTGGATTGTACCTTTTCAGG
CTTGCACTGGACTATGGCGGGAATGCGGACGTGGCTAATGGAGCCGGTAA
GAAGCATCAGCATTTCCTTTCTTACAGTTACAATTACTGAAGCTTTAAAT
TGAATCATAAAGAGTGCTAAATGTATTCATATGAAAGTAAAGACCGTTGT
TTTTTTAAACATATCTGTCTATGTTTTTTTTAGTTGTCATACATGTCGTT
CCACAGTGTGTTTTTTTAACTTTTTAACAATGTTATCTATTTGAAATGCA
AATAAAGACATGTACTTAAAGTATAGACCACCTTAAAGTAACGGTTGTTT
TACTCTCTCCAGGCCCCTCGGCGTTCCGCCGTGCTATCTGTACCTTTGCC
TTTCTGGGTGCCGCCTTGGTCATGAGCATCACACACCTCCGCCTCATGGT
CTTCATCGGAACACTGTCCGAACTTCTGCAGGGACTCACCCAGGACGCTA
AAATCAGTACGTACAACATTTCCGTTGCTTTTGTATGCATTTATGTGTCA
TACATATTTATTGTACTTCTACGGTATACTTCATGTATTTATCTCAATTC
CGAGTAATGTATATATAGAGAGAGAGACAGAGAGAGAGAGCGACTGGGAG
AGAGAGAAACAGAGAAATAGACCGACAGCAGTATAGATTGCTTACTATCG
GGGGGAAAGACACCAGTGACCCTCAGGATCGAGATGTGGAAGAGGAGTGA
CCCGAACAACAATAGGGCACTCCTACCCCCCAGTGAGTCCCTGCCCCCGG
GGGCCGACTTGCCCAGAAGGACTTGGGTTGCCCTGAACCGGGCAAGGGCA
AAGGTGGCCAGGACAGGTGACAACCTGCTACGGTGGGGGAAGATCAACAG
TGCAGCCTGCGGCTGCGGTGAGGACCCCCAAACTCTTCAGCACCTGATGA
ACAACTGCAGACTCTCACCTACCTGCACAGACTCGGACCTGCGGGAAGCG
AACGAAGTTGCGCTGAACTGGATTGAGATACATGGCGGCAAGCTATGATG
ATGACTATACGGTGACTTCACTAATTGATATATTAAGTGTTTTCCTGTTG
AGGAAGGCTTCAGTTGAAATATGATAATTATTAGATAATTAATGAATCAT
TTTTATGATGTCCTCACAGTTGATGTCTACACCTACATCTTCGGGCTGGT
GCAAATCTGCTGTTTGATATCGGCACCTGTGATTGGTGCACTCATGGACT
GGAAAACGCAACCACCAGCAGAAAACAACCAATCAGATGACGACGTCTTT
GCAGATGATCGGTCCATTGCCTCCGCGGAAACTGTTCGGTATGTTTGGTT
TTATGTTATCCATAATCAAGAAAACATAACATTTTACACATTCAATCATG
TTTAAAAGCATTCTTAGTTGATCTTAGTGGATCGATATGTAGCAGGGGTT
TGTACATTGTGAAGTTTGCCTTCGGTTTGCCGTCATTGGTCTATTTGGGG
TTTTTAACTGTTTGATCAATCATTTTTATCTGTTATTCGAAAACAAGTGT
CATTTGCCATTTACAGATGTATTCTAATCCAGACTTGTGTCCATATGCAT
TATAAAAAAACGTTCGCCGTCTATTTTTTACAGTACCAACAGCATCACTA
CGTATACATTCACCGCCCATGTTTTTTATTATTTTTTTTTTCAATTCTTT
AAATTTTTCGACAAACTTTTCTAACAAACTTTCAATAAACAATAGACATG
AGCCGGTCTACATCCCTAGATATGTCTGTATTAAAACAAAACGTCCCTAG
ATGTCCAAATGTCTCCATAAACAATAACTATTGCACCAACTTGTCATGCA
ATAAGAATAACAGCCACCGTCCATGTTCACAGAACCAGCAGTCTGTGCCT
TTAAATGTTAATTGTTTCAACAAAATGCCCATTTGCAGATGCACGTTGTC
CACAAGTTGTGTCCATATGCATTAAAGGAGAATTCCACTCAGTAATAAGC
GGGTATTTTTTTCTGATAAATTATGCTTTTCTGAAAACAAATACACCCGA
GTTTTGACTGAATTACCTCCTAGGACTTTTCGACAGTAATTATAATCCTT
TTCAAATCCATGTAATCCCTCACAGACCCGCTCTTTTCTACTCTGCTGTA
TACGCATGCGCACTAGTCCAAACACGGAGCAGACGACAAAACTGTCATGA
CGTTTACCGCCTATTTTCTGCAGCACCAACAGTACCACTACCAGCTCCAC
CGGGTCCACATCCTCCCGCCCGTCCATCAGGTCCAGCATCTCCCTGACGG
AGGAGGAGAAGGCCCGCATCATGGTGCAGAAGATCTGGAACGCCGCCATG
GCCTTCTTCATCACCAACCTCCTCACGCTGCTGTTCGGGGTTCTCGTGCT
CATACCAAACTTAGTGGTGCAGGTGGGTCAAAGCCGCCTATCTCTAAACA
AAGCCGCAAAACAAGCACACGTATAAACAAGGCAAGGAAAGACATGTCCC
CTATTTACGTACGTCAGGAGCGCACACAAGGGCGCACACAAAGCGCGCGC
GCCAAACACAATACAACGTTGAGTCAAATCTGCCCAAGAAGACCACAAAG
TGGACCGATAAAATGGGGTCCATGTGGACAGGTAGTCACTATAGACAAGA
CTCGTAATGCTTGAAAGAAAGGAGAAATTTATCACCAAAAAGTGGTCACT
TTGGCATATAGAGGTGGCCACTTCTACAGGTTTTACTGTAACTAACAGTG
TTAACCACCTGTCCAAGTCATAAGATGTGGTGTTTAAAGCTTATCTTCTT
CCACATGATGAAAGCGATCTCTTGATCGAATTTACATGTCACATCATTAC
CAAGCACCTTACTTTGAGACAGTAAACTGACCATAGTTTCTCCACCCCTC
CTTTTCCCCACAGGTCGCCACGTTTGTGCTGCACACCGTCATCAGAGCCT
TCATGCACACAGCTACGGCGGGGCTTTTTGCAATCATGTAAGTACATCAT
TTGATAACCTTCTTTCAGGACAACCTATTATGTTAGGGAATAACTGTAAG
CCGATAGGAAATGAAAAATATAGAAGAAGAACTTGTGCGACAATTGTAAC
GTGTACACGTCATAATTTGCATGGTGTAAATCTTAGGAGATTTAATCCTT
GATGTCATCGACCCTTTTACTTTAGCCATGAGAACATATTTTGTCACGTC
TAACTTTGCATATGCTAGAGTGCTTCTGACTCTCCATCTGCTACGTACTA
GATTCTTTACCCATATTTTGTTTTCAATAATGATTTGTGTAAAATGATCA
TTTTCATGATCGTTGATTCTTCCATTTAGGTTCCAAGTGTCCCTGTTCGG
GAGTCTCATCGGCCTGCAGGCGTTCTTCCACGCTGCTTTCGCCACGCTGC
AGTACCCGCTCTTCATCGCCGTCAACGGACCTCTCGCTAAAGACCCTTTC
TGGGTAAGTCATATTGATCAGAAATATTATTACTATCTCTAAAAAATACA
TAACGTATTATTCTGGTGTTTGTAAAGTTTTGAGCTTTGATCCAACACAA
AAGTGGAACTCACCATATTTTTGGCGACGCCTCAGGGGCGAGCCAAATTT
TTACTATATTGTGTGCAGATTGCAAGAATTCTAGGAATTGTACAGGAATG
TGAAAGTCCATGGGACGATAACTCAAGAATGCCTGGACGTATTGTCTTCA
TATTTTGTAGGTGGGTAGGTCTGTGGGAGACCTTGTAATGATTGGGTTTT
GGGCCCCCTAGCGACTTTCTATGGTACTGCAGGGGAACTTTCACTTTTCA
AATCTCGTCTTCTGAACATGCTATAGTCATGATTTTTAAGTGGTGGATAG
CTCTTTGTTAGGAAAATATGTCCTGTAGATTTGGACCCCCTAGCGGCTTT
TTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNACAATATACTATAAATCCATGGTGGTAA
ATGATGGGGATTTAATTTTTGCACCATTTGGAAGTTAAGTAAATGTGGCC
ACTATTAGACAGATCTAACATAGAGGGCCTCATTTACATAATTTATGAAG
AAGTGGTACGATATCTTTTTTTGTGAAAACAAGATTTTCACACATTGGAC
AACTTGTGTTATTTTGGCAGAGAAGGTGATCGACTGATATGACTAATTAT
GCGAGGTCCTTATTTGCATGTGGGCTAAAAACGAAAACGTAAACAGAGAC
CACCGTCGCCATGGCAACATCTTTTTATGTTGCCAATCTTGTTCTGGTTG
TTGTGGGCGAGCCATTTTGTAAACTGCAAAATATAATTCCTAGACAATAC
CATTCCTAGACATTCAATAGAGTAGAATAGCCCACTGCACATTGCCATTA
TTTCAATTGCACATCCACTAAACACTGAAGTGTCATTGATGCAACTCATT
TAGTTAGCAAATATCATATCCGCTCAAGGTATTACTGAAGACAGTAAAGA
TGACATTGTCATTGATACAACTTATTTTATTAGCAAATATATGTTCAAAG
AATTACATAGTAAAATGGCAAGTGTTTTAAAAGACCCCATGAACCTTTTC
ATTATATTTGATTTATGAATATGAATTTTTGTACCTTCACAGATCAACGT
TGGTCTTCTGGTCGTCTCGCTGCTAAACTTCGCCCTTCCTGTCTACCTTC
TGAGAAAAAGTAAAGAAATGGAGAAGGAACTAAGCTGGGAAGACGACATC
AAGACCCTTCCCCCCATCCCTACCGAGATTTCCATCCCCATAGAGGGCCC
ACAGAACGAACCTGTGGCATACGTATAACAGAATGCTGACAAACATGTTA
GATATGGTCACTTGTGTTTCATCAACTAGTATTGTCTGTTTGTATTATCA
TAATGAATGGGGACTTTTATTGTACATATATACCGAGTGGTTACAGGTCA
CAACAAAAGAGTAATTGCATACCCGGTAAATCTCTTCATGGCGTAACACA
CCAGGTTTGTACTGAAGAGTACAAGCTACATATCCGGACAGATGTTGTCA
GGTCTTGTAATAAGTTGTACTGACTGTTTGATAAGTCACTATATATATAC
CTCTTCAACGAACATATATGCGAGTAACCGAATGCTGTATCACTCATTTA
CAAGTTTTCCCTTCAGCAAACGCGAAGGTGTGCAATTTTGTAGGATCTCA
TGTTACAAAAAGCGACTGTTGATGAAACACAATCGACCTTAAAGGTAGTG
CACGACATCAGATGTAAACTTTATCCTAGGATGGAATATCCGTGCAATAG
TCTGCAGTAGCGTTAAGATCTTTAAACGGAAGGTCATAACTACTACGAAA
TCACACACGGCCATTCTCTTTCTAAGAATTAATCAGACAGAAGGCAACTG
ACTTTTGGAAGAAAATACTTAAACCAAGGAGGTATGACTTGAACATCCAT
GCTTGAACGCAATATATTCCCTCTTCTGCACAAAGACTGGTAAAGTAACT
CAGGGGACAGTCACAAGACTTTTCGTTTGAAATATTTCCAAGGAACAATC
TAAGAAAAGCAGGGAAAATGTGATATTCTAACAAGCAAATTCTTTCAGCC
TCTGCTTTAAACCTTAATATGAAATTATGCTACTTCTTTTCCATAGTTAA
TGAGAAAATGTTGGCGTGAAGAAGTGGACAAACGAGAGTGCGAAAGTGAA
GAAAGATGTATGTATGTAATATTATGTATATATGATGTATTCCAAATTGT
TTGGAATGAAAGTGATGTTGAGATACCACTTCAGGTTCTTCGACTCAGAT
GACATAAAACAACAACAAAAACATAAAAAGAAAGAAATGATATTTTGCTT
CACGGGAAAGAGAGTACGTATTTTATATCTTTAAAACTATGGGAAAGAAA
ACTTAAGTAGAAAGAAGTCTCTATTTTCGGGATGCATACTAGTACTTGGT
TCTTTTGAGAGGATAAGGAAAGGAAAGGAATTTACCTACAATTTCTTTCA
TGTCCCGTTACATGTTACAATATGATTTATTTTTATTGCCAGTTCCATGG
CAGACTGTTCTTTTGTAGCCTGTGGCTACGAGAAAGTTTTCATTGCCAGG
TAATGGCTGAGACATGATACTAGTGTATGCGAGTACGTTATACTCTTGGG
GCGTTTTGTATGTAAATATTGCTGTAAAAAGTTATTTGTAGGGCACATGG
AAAACAAATTGTTGTGTTGTCCTCTTTAACGTCATTTTGCGTGTGCTGTG
CTAGTTTTAGTAGCACCAGACACTTGTAAAGTTTCTTATGGTGGGCCGCT
ATGTATAGGTAATATATAATTTGGGTACAAACTGTTTTCAAGGGCAGACA
ATACTCTGCGATAAAATGACTCTTCTCTGACCTCAACTCAGAAGACAGAA
CTGCAAAAATGATGAGCGCATAGCGTACCGGTGATTTTTTCTGCACTTAA
GCACACTTTTGTGATGCTTTTTATGTTAGGAATATAGGGTATCTACTTAA
CGGTGGAACGTATACAGCAGAGCTTCTACACATTTCATGATTTGCTCAGG
GATGACCCGTAGTTTGGACGGACTGATGACAGTTACCCACATTTCCTAGT
CGTTGTTTTCTTGTGGAGAACACGTGTTGTGGGTCGTGTCAACGGAAAAA
TAAACGTG Coding sequence (CDS) from alignment at Sc0000050:514477..523334+ >BlTCONS00062674 ID=BlTCONS00062674|Name=BlTCONS00062674|organism=Branchiostoma lanceolatum|type=CDS|length=1059bp|location=Sequence derived from alignment at Sc0000050:514477..523334+ (Branchiostoma lanceolatum)
ATGATGGGGTCGAGCGCCTCCTCTGCTATTGTCTTCCCCGTTATGAAGGC
AATCTTTGACCTTGGTGTTTCCTTCCGGGTCATGATGATGGTGATGGCTG
CTGGCAGCCTATTGGCGTTCATCAATTGCGTCATCAACTACCCGTCAGAG
CCCGTGCCTGGGCCGGAGACCATGGATTTCACCATACACACCGGGCTGCT
CTTCGGACGGCAGAACAAAATCAGCGGGAAGAACTTCTACTCTATGGTCA
CCACTGTCGGCCGGAGGCTTAGTGTCGGGCACAGCCTGAAAGAGAGTGAA
ACATACACATCAAAGCTTGCACTGGACTATGGCGGGAATGCGGACGTGGC
TAATGGAGCCGGCCCCTCGGCGTTCCGCCGTGCTATCTGTACCTTTGCCT
TTCTGGGTGCCGCCTTGGTCATGAGCATCACACACCTCCGCCTCATGGTC
TTCATCGGAACACTGTCCGAACTTCTGCAGGGACTCACCCAGGACGCTAA
AATCATTGATGTCTACACCTACATCTTCGGGCTGGTGCAAATCTGCTGTT
TGATATCGGCACCTGTGATTGGTGCACTCATGGACTGGAAAACGCAACCA
CCAGCAGAAAACAACCAATCAGATGACGACGTCTTTGCAGATGATCGGTC
CATTGCCTCCGCGGAAACTGTTCGCACCAACAGTACCACTACCAGCTCCA
CCGGGTCCACATCCTCCCGCCCGTCCATCAGGTCCAGCATCTCCCTGACG
GAGGAGGAGAAGGCCCGCATCATGGTGCAGAAGATCTGGAACGCCGCCAT
GGCCTTCTTCATCACCAACCTCCTCACGCTGCTGTTCGGGGTTCTCGTGC
TCATACCAAACTTAGTGGTGCAGGTCGCCACGTTTGTGCTGCACACCGTC
ATCAGAGCCTTCATGCACACAGCTACGGCGGGGCTTTTTGCAATCATGGT
TCCAAGTGTCCCTGTTCGGGAGTCTCATCGGCCTGCAGGCGTTCTTCCAC
GCTGCTTTCGCCACGCTGCAGTACCCGCTCTTCATCGCCGTCAACGGACC
TCTCGCTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| BlTCONS00062674-exon-Sc0000050-1564993656:514477..515094 | BlTCONS00062674-exon-Sc0000050-1564993656:514477..515094 | Branchiostoma lanceolatum | exon |
| BlTCONS00062674-exon-Sc0000050-1564993656:515996..516261 | BlTCONS00062674-exon-Sc0000050-1564993656:515996..516261 | Branchiostoma lanceolatum | exon |
| BlTCONS00062674-exon-Sc0000050-1564993656:516676..516722 | BlTCONS00062674-exon-Sc0000050-1564993656:516676..516722 | Branchiostoma lanceolatum | exon |
| BlTCONS00062674-exon-Sc0000050-1564993656:516989..517132 | BlTCONS00062674-exon-Sc0000050-1564993656:516989..517132 | Branchiostoma lanceolatum | exon |
| BlTCONS00062674-exon-Sc0000050-1564993656:517796..517964 | BlTCONS00062674-exon-Sc0000050-1564993656:517796..517964 | Branchiostoma lanceolatum | exon |
| BlTCONS00062674-exon-Sc0000050-1564993656:518850..519048 | BlTCONS00062674-exon-Sc0000050-1564993656:518850..519048 | Branchiostoma lanceolatum | exon |
| BlTCONS00062674-exon-Sc0000050-1564993656:519540..519614 | BlTCONS00062674-exon-Sc0000050-1564993656:519540..519614 | Branchiostoma lanceolatum | exon |
| BlTCONS00062674-exon-Sc0000050-1564993656:519956..520079 | BlTCONS00062674-exon-Sc0000050-1564993656:519956..520079 | Branchiostoma lanceolatum | exon |
| BlTCONS00062674-exon-Sc0000050-1564993656:521319..523334 | BlTCONS00062674-exon-Sc0000050-1564993656:521319..523334 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000050 | genome | Sc0000050:514477..523334 + |
Properties
| Property Name | Value |
|---|
| GeneID | BlCUFF030806 |
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