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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000049:334260..341376- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00062282 ID=BlTCONS00062282|Name=BlTCONS00062282|organism=Branchiostoma lanceolatum|type=mRNA|length=7117bp|location=Sequence derived from alignment at Sc0000049:334260..341376- (Branchiostoma lanceolatum)
AGTGGATCTATGAGGGGGACCTGGAAGACAACTATCAAGAGGTTTGTTTG
TTTTTCATAGTACAGAGCTTTAATTCTTTGAGTTGTTAAATATATATCTT
TTCTGCAATGTCAAAATTTTTTCAGCAATTTCAAAAAGTTTTCGGAAAAC
TCAAAAAATTTTGGTTGGGTTGCTTAGGGTGGGGTTTTTGAGTCTAGAAA
AAAAGCTAACTACAGAAAAATGAACTTTAAATACTGCCATTTTCAATTTC
ATTCAACCATTCATTACTTCTTTCATCCTACACCCTAGACATACTCTCAA
AGCAAATTTGTAGGGTTCATTAACTTAAAACCAGCCCTAATGCTATAAAA
ACCTATGATAAATCAATGTGGACAATCAACTGACTTGACTGTTTGTTTTT
CTGTTTGTTTTTCTGTTTATTTGTTTGTAGTATTTTGTTGCATCGGACCC
GACTGTGAAAGAGGACCGACTGTGGCATGACAAGTATTCCCTGCGCAAGT
CTATGATCCCAGCTTTTATCACAAGAGAACAGGCCGACAAGGTAAGGATA
CAATGGACCTTTGGGATATGCCAACATCATCAAATATTAGCAAACTGAAT
AAACTTTTGAGCTCTGTACTCTCCTACCGCTTTTCATTTTGTATGTTCAG
AGTAATTTGGGGGGAAATTCTCAGCAATAAAAATGTCACTTAACTTTCAA
TTGAGAAGCATTTCTATGTGACATGTTTTCTTTCCTATTTTACCTAGTCA
TGTTCATTTTTTCTTGTGCCCCATAGATCTTGTTGATAGGGAAGACGATC
AACTTCATCCGCCAGGTGTGCCGGGACAGGTCCCCCTTAAAGACCAAGGC
AGTGGTGAAGACTGGGGAGGCTGAGGAAGAAGGTAACTTACCGAAGATCA
GGAAATAGTCGCAGTGGATTTATACGTATTCGCAGTTATGCATGATGTTA
CTGTAGTTGTTTCTACTGCAAATTTGAAACACAGTGAAATCCTCCTTTTC
CATATGCCATGAAATTAAATCCCTACAATCTTAGAAGGATTTACAGCAAC
TTACTTATGACCAACATACCTGCAGTTCCCACATTGACTGTTAGGTGGTG
CTCATAATCCTGCTCAAGAAATCAAATGCCTTATTCTACAATAACATGTA
TGACTCCATAGGTCTGTTTCATGGCATAGACGTTTATTAGCTAAGTATGC
AATGTGTCTGCCAATGCCAGTGGAAGAATAGCTAGAATTTTGCTTGTGTA
TTGTCCAATCTTTTACTAGGTGACCTGTTCACGAGGGATGTAGACGGTAG
TCTGCAGCAGGTGATTGACACAGCCTACCGAGAGACCAGCCGGATCCTAC
TGGACATCCTGCACACCAAGTACAAGTTCATGGACCATCTCAAGGTGAAC
AAATAACGCCATCTTTTATATTTTAATCATCATTACGTTGGTAAAAATGG
AGGTTATTTAATTTTGGTCTGTTTGCCCATCTGTCTGTTTAGATATTTGT
GGCATGAATTAGGAAGCTCTGGATGGATCATTGTGAGTATTTTTGGTATG
TAGGCAGGTCTTGGGAAGATCGCAGAACATCATTCTGTTTTTGTATCTTT
TGTCCTGGTTTAAATCTTGTAGTTCTTTCACTATTGCACTGCTGAGGGAT
CTGTCTGTTGAAACTAGCTTAGTGTTCTCCATTGACTCTAGTTGATTTCT
GTTCCTTAGGCCATGAGACGGTACCTACTACTGGGACAGGGGGATTTCAT
CAGACATCTTATGGACCTGCTGGAGTAAGTTTGAGTAACCTACATTTCTT
GCAATGCTATAGACAAACTAGAAAAGATCAGTCACTGACAATAGGTAGTG
GATGCTAACTGAAACGTCTGACTTTCCAAAACCTATCCAGCTGCTTGAGT
AACTGTTACCTTATGTATCTTTTTACCGGGAGATCTAACCTTCATCGACG
CAGAAAAAAATGTGGTAAATTTGTGTGAGAACAAAAAAGAAACTGCTAAG
AGAACTGCATCAGGATTATTTAAAAAAATGAACGGTTTGCCTGAAAAAGT
CGATGAAAATACTGTAGGACCGAAGAAAAATAAAGGACAATGAACTCAGA
ATGGGGAAAAATATCAAAGACTTTCACAGCCATATATTTGAATATCTGAC
CTTTAAATCAGACCAACTATCAGAACAACTCAGATCACTGAACACTTCTT
TGTTGCACCCCTCCCACTAGTCCACATCTGAACAAGCCAGCCAATATATA
CCCTGTACCTGCATCAGCTGACTAGTATCCTAAAGAGTATGCCATGCCAA
AAAGCAGCTATCCTGACATACAAAACACATATATACACACTGATCAGTTG
TTTTACTCTCCTCCACAGACCAGACCTTAACAAACCTGCCAGTACCCTGT
ACCTGCACAACCTGACTGGTATCCTGGAGACTGCCATCAGGGCCACTAAT
GCACAGTTTGATGACCCTGACATCCTCAAGAGAATAGATGTACGACTACT
GGAGGTAAGCAGCTGTCTGTTGTTCTTTTACTCAATGACAGTAGAACACT
AAGCTTTAGTCTGTGAAACAATTGAAAAGTATGGCGTTCTTCACCTCATC
TTGGGATATTTTAATAGCCTGATATCCATCCTATTCTAGCTTCGTTGGCT
CCTCTGATTACTTCTATACAGAATAGTGGAAACGTCCTGCAACTGCATTC
AGTCTTTCTTCATCGTCTTCCACTTTGCCTTGCAAGCTCCCTTCCACTGC
TTAAGCAAAATGTTTGATCCCCAAATAACGCAGGACGTAAGAGCCTAACA
CTCAACGGGGGACAGGCTATTTTGCAGGTAAGCGGTCGTTGGAGCAAACC
GGAGCTAGAATAGGATGCCAGGCTTACTCGGCCAATCATTGCCTGTCTTT
GCCTGTAGGTTTCCCCAGGAGACTGTGGCTGGGATGTGTTCAGTCTGGAT
TATCACGTGGACGGCCCCATCAGTACGGTTTTCACGCCGGAGACCAAGAT
CCAATACCTGCGGGTCTTCAACTTCCTGTGGCGTGCCAAACGGATGGAGT
ACACACTGACGGAGATCTGGAAGGACCAGATGACCATAAACAAGCTGCTG
CTTAAGATTGTGCCAGGTGAGACTCTTTGTCTTATTTGTACTGCATTTCT
ATTGACTGAACAAAAGAAGTGGTTTGAAATCTGACTTTGTTTAAACAGAA
GTAATATTTTGAAACATGCATTTTTTTAGAACAGCAACTTCTAACAATTT
TGGATGGTGCCTGTTTCATTTTTGATTTTCTCATTTTACTGGGAGTGTAC
AAAGTAGAGCATGTTTTATTTGTACTGAAANTACAAAGTAGAACATGTTT
TATTTGTACTGAAAACAATTAAGAGAATTATATAATTAATTAGGACATTG
TTCATCCCTCCTTCAGAGTTGGCCTCCTTACTCCACCGCTGCCACACCCT
CTCCTCAGAGATGGTTCACTTCATCAACCAGATGCAATACTACATCACTT
TTGAGGTACGTCTGACTTTTTAAAACTATCTTTCATTGTCATTTTACCAA
AAGAATTAAGTCTTTGTATTATGTAGTTGTAGCTACCTCAAATATATGTG
AATGCACTATATGTTTAGATCTAACTTTCAAGGGGAAATTAACTTCCTAA
TGTACAGTGTCCCTCAGAATGACTGACCCTCTTTTTTTGGTCACATGATC
TTGTGAACAGATGGCTACAAAACTGGATCAGACTCAGAGTTGTTTGGACA
TTTGCACAGCATGTTTGTTTTGATTCTCGTTACTGATGCCTACTGTAGGT
TCTGGAGTGTTCGTGGGATGAGCTGTGGAAGAAAGTGAAGGAGTCTCCCG
ACCTTGATCATGTGATCGCCTCTCATCAAGTGTTCCTGGACGCCATCATA
CAACACTGCTTACTGGATGATGAATCGAGGGTAGGTAACTCTTCCTTGGT
TTGGTAAGTTACTGTATTTATGTTTTAGGATCAGTGATGAGGAGTAACTA
TATATAGGTATATGTGTTGTATTTTGACAGTTACTTGAAGCCCCACTACC
ATCACACTCACTTAAGTTGGTGCTGGGTTGGGAGTAGCCTGGAATCCATA
CCTATTATAGCTCTCCTTTGATAGCATCCAAAAAAATATGACTCTCCTGA
CTTTGATGTTTCAAAATGCATTGTCGGCTAGCGCAGTTGACTTTTAAAGA
CAAGTAGGCAACCAACCTTCAACCACAAATGGCCTGGCTCACGACTAACT
TCCAAACATTGTCTGAAGAAGGTCAGAAGGCCATGGTTGGTTCTGTATGA
CAAGGGCTTTATGTTTGTTGAATATTTCAACCAGGATTTGCTCTGGCAAA
CAGCTAAGAAGTATTTTTGGTGTTTTTGGTGTTGCAAATATTCCAACAAG
TTTTTAATTGCAGGCTGTACTAGGATTTTTGTCAACTCATCAGTTTCTGT
TTCCATGTAGGAACTTCTCACCCAACTGAGGACCATTTTCGACCTAATTA
TCAAGTTCCAGTCTGCTGAGAACACCATGTACAAGAAAGCAGAGGAGGAG
ATGAACCTCAGACTCAGGTTCCTCCGCAGGATCCAGGAGAACACTGAAAA
GGTCAGAGGGGACAAGTCAAATTTCTGCAAACTGTCTCCTTGTATGACAT
TCAGGTGCTGCATACGCACAATGGTAGCTGAATGAGTCACACAAGGTGTT
CAAACTTCAAGTGTGTGTTTTTTTAAATCTAATTTAAAAATCTATCTCGC
TGTGCTAAATTTGTATTCAGATAGGCTTTTAGGTAGCCTGCTTTCTTTGC
ATAGCACTCAGCAATCAAGGGAAAGAGTATGGGAGTTGAACACACATCAC
TACAAGTGAACAATCCCTCTCCTGTAATGCTTGCTCACTCTTATTTATTA
AGTAAAATCTTTGATTTGTCTACAGGGCAAATGGGGCGTGACCGAGCTGG
ATGAGGAAGAGGAGAAGACACGAATGGGGGAGTTTCGGGACAAGTTCCTC
TCCAAGACAACTTCACAGCTAAGGGTTATTTCACAGTCTTACCAGGTAAG
GGCAATGAGACTCTATTTTGTGTAGTGGTTGGATGTTGTCTTATCCACCT
GTGCTTAGCCTGGATACCAGACCCCCAATCTCTAAAATATATTTTGAGTG
GGGGTCTGGTCTTGGTCCTGCAGGAAATTTCTCGCCAGCTCAAATACTGA
GCGAGGATCCCACCAATAGAGCAACAGCAGGATCAGCAGGGAGCCATTTA
CACCCCTGCCCTGATTGGATAAAGACTCCCAGCTGTATGGAGTTATTTTT
GAAAATAACAGCAGAACTTAAAGTGTATTGAGTAGTCTACCTCTGGCTGT
CCTGTGTGTTAAATGAGATCTTGAGGTAACAATTCCCCAACCAAATAGGA
CATTAGGTGCCTTATCTACAGTTACACTTTATCTGTTAGTGGGCACTGTC
AGTGAAGATTCAAACATACAGCTGGTCAGTCAGTGAAGATACATATCCAA
TCAGGGCAGGGGTGTAAATGGCTCCCTGCTGATCCTGCTGTTGCTCTATT
GGTGGGATCCTGGCTCAGTATTTGAGCTGGCGAGAAATTTCCTGCAGGGC
CAAGACCAGACCCCCACTCGAAATATATTTTAGAGATTTGGGGTCTGGTA
TCCAGGCTAACCTGTGCTGTGCAATGAGACTTAGAGCAGTAATTGCCTAC
ATTTTCTTAATAAATAACCCATATACTGCAAAAGCAGTAGCTTAGTTCAT
AAAACAAAGAATACAATAGTCACTATTGCTGTAGAATGAGAAGGAATACT
GTAAATCTTGAAATGTTTGCTGATCTAGTTTTGCCATTATATATTGCAGT
GACTTCTTCGTCTTGAAATCATCACACCACAAATACATGCGTTTTCATTA
CAGCAATGTACTCTATTTATTATATGTTAATGTTCATATTTCTATTCATC
CCCTCCCAGGACATGGTGCAGAACTTCCTGCTGATGCTGAACGAGCATAC
CGACGCCAGTCTTCGCTTCCTCAGCTTCCGTCTCGACTTCAACGGACATT
ACCACCAGCGCGAACCCAAACTCAACCGCTCCCTCAGTGTCAGTTACGCC
AGAACGCGACGACGGTCAGGCAAGGACCCATGAATTTAACTCAAGAACGA
CCCCTTTGTCTTCCTTGTGAAAAAACTGTTCCCTGTGAATTCAGAAAGAT
GCTTAAGATTTATAAAATCTGTTACAGACTTTACAATCAAAAACAAAATA
CTTCAGAATCTGTATAAATGTATCACATTATAAGAAATACAAAGATAGTA
CCATGATACAGAGAAAAGGATGTTCTTTCAAACAACTTGTCAAACAAGTT
AAGATGTAGCGCTTAAGATATAAAACACAATTTTCTCATCTGGCTAACAG
GCTTTCAATGCATATGCAAATTTAGGTAACATTTGAAGGGTTAATGTGCC
ACGTGTTTGATACGCGAGCCAAGTACAAGAGCTACATGTATGTGTCCACA
AAATATATCAATACCTGACCAATGTTAACTGGTACAAAAGATCTCTATTG
TATGTACATGTATGTACGCAATTAGTACAAGTGGCTTGTTGTTGCCATCC
ACATTGACTGTCTCTCGAGGATAACATTGTAAGGATATACAATATTTCCT
CCCAAGTGATATTCCGGTATTCTCATAGGAGATATGATAAAACGGCTCCT
TTTCCCCATTGCTTTGTAAACTTAACAAAACATGAATGCTGTATTATAGT
CTGAAATCCCCTGAGTGAAAAGTTACTTGGATGTTTTGCACTATGCTGGT
ATGACAACAGACATGCATGAATGGGCACCATCCTGCCCCAAGGATATGTA
TTTATTGTTCATGTCTGAGTACACATGAATTAATGATAGAGGTATACTGT
GTGTTTCTCTATTAGAAAACGAGTCCTTTGTGTTTCATTGTTATTACAAT
ACTCCTAGAGTTGTTCTTTTTGTGTGGAGACAAGAATGAGTTATGACGGT
ACGCCGGAGAGAGTATCGCTTTCACGGCACATCCTTTATTTCTCGTCGAC
CCCTGCGGCTTCGCCGTACGCCAATTCTTTTGATCACGGGAACGGCGTAA
AGGTATTGACACCCCAC Coding sequence (CDS) from alignment at Sc0000049:334260..341376- >BlTCONS00062282 ID=BlTCONS00062282|Name=BlTCONS00062282|organism=Branchiostoma lanceolatum|type=CDS|length=1449bp|location=Sequence derived from alignment at Sc0000049:334260..341376- (Branchiostoma lanceolatum)
AGTGGATCTATGAGGGGGACCTGGAAGACAACTATCAAGAGGTATTTTGT
TGCATCGGACCCGACTGTGAAAGAGGACCGACTGTGGCATGACAAGTATT
CCCTGCGCAAGTCTATGATCCCAGCTTTTATCACAAGAGAACAGGCCGAC
AAGATCTTGTTGATAGGGAAGACGATCAACTTCATCCGCCAGGTGTGCCG
GGACAGGTCCCCCTTAAAGACCAAGGCAGTGGTGAAGACTGGGGAGGCTG
AGGAAGAAGGTGACCTGTTCACGAGGGATGTAGACGGTAGTCTGCAGCAG
GTGATTGACACAGCCTACCGAGAGACCAGCCGGATCCTACTGGACATCCT
GCACACCAAGTACAAGTTCATGGACCATCTCAAGGCCATGAGACGGTACC
TACTACTGGGACAGGGGGATTTCATCAGACATCTTATGGACCTGCTGGAA
CCAGACCTTAACAAACCTGCCAGTACCCTGTACCTGCACAACCTGACTGG
TATCCTGGAGACTGCCATCAGGGCCACTAATGCACAGTTTGATGACCCTG
ACATCCTCAAGAGAATAGATGTACGACTACTGGAGGTTTCCCCAGGAGAC
TGTGGCTGGGATGTGTTCAGTCTGGATTATCACGTGGACGGCCCCATCAG
TACGGTTTTCACGCCGGAGACCAAGATCCAATACCTGCGGGTCTTCAACT
TCCTGTGGCGTGCCAAACGGATGGAGTACACACTGACGGAGATCTGGAAG
GACCAGATGACCATAAACAAGCTGCTGCTTAAGATTGTGCCAGAGTTGGC
CTCCTTACTCCACCGCTGCCACACCCTCTCCTCAGAGATGGTTCACTTCA
TCAACCAGATGCAATACTACATCACTTTTGAGGTTCTGGAGTGTTCGTGG
GATGAGCTGTGGAAGAAAGTGAAGGAGTCTCCCGACCTTGATCATGTGAT
CGCCTCTCATCAAGTGTTCCTGGACGCCATCATACAACACTGCTTACTGG
ATGATGAATCGAGGGAACTTCTCACCCAACTGAGGACCATTTTCGACCTA
ATTATCAAGTTCCAGTCTGCTGAGAACACCATGTACAAGAAAGCAGAGGA
GGAGATGAACCTCAGACTCAGGTTCCTCCGCAGGATCCAGGAGAACACTG
AAAAGGGCAAATGGGGCGTGACCGAGCTGGATGAGGAAGAGGAGAAGACA
CGAATGGGGGAGTTTCGGGACAAGTTCCTCTCCAAGACAACTTCACAGCT
AAGGGTTATTTCACAGTCTTACCAGGACATGGTGCAGAACTTCCTGCTGA
TGCTGAACGAGCATACCGACGCCAGTCTTCGCTTCCTCAGCTTCCGTCTC
GACTTCAACGGACATTACCACCAGCGCGAACCCAAACTCAACCGCTCCCT
CAGTGTCAGTTACGCCAGAACGCGACGACGGTCAGGCAAGGACCCATGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| BlTCONS00062282-exon-Sc0000049-1564993656:341336..341376 | BlTCONS00062282-exon-Sc0000049-1564993656:341336..341376 | Branchiostoma lanceolatum | exon |
| BlTCONS00062282-exon-Sc0000049-1564993656:340836..340947 | BlTCONS00062282-exon-Sc0000049-1564993656:340836..340947 | Branchiostoma lanceolatum | exon |
| BlTCONS00062282-exon-Sc0000049-1564993656:340495..340600 | BlTCONS00062282-exon-Sc0000049-1564993656:340495..340600 | Branchiostoma lanceolatum | exon |
| BlTCONS00062282-exon-Sc0000049-1564993656:339983..340107 | BlTCONS00062282-exon-Sc0000049-1564993656:339983..340107 | Branchiostoma lanceolatum | exon |
| BlTCONS00062282-exon-Sc0000049-1564993656:339603..339667 | BlTCONS00062282-exon-Sc0000049-1564993656:339603..339667 | Branchiostoma lanceolatum | exon |
| BlTCONS00062282-exon-Sc0000049-1564993656:338873..339008 | BlTCONS00062282-exon-Sc0000049-1564993656:338873..339008 | Branchiostoma lanceolatum | exon |
| BlTCONS00062282-exon-Sc0000049-1564993656:338261..338468 | BlTCONS00062282-exon-Sc0000049-1564993656:338261..338468 | Branchiostoma lanceolatum | exon |
| BlTCONS00062282-exon-Sc0000049-1564993656:337872..337960 | BlTCONS00062282-exon-Sc0000049-1564993656:337872..337960 | Branchiostoma lanceolatum | exon |
| BlTCONS00062282-exon-Sc0000049-1564993656:337447..337578 | BlTCONS00062282-exon-Sc0000049-1564993656:337447..337578 | Branchiostoma lanceolatum | exon |
| BlTCONS00062282-exon-Sc0000049-1564993656:336776..336916 | BlTCONS00062282-exon-Sc0000049-1564993656:336776..336916 | Branchiostoma lanceolatum | exon |
| BlTCONS00062282-exon-Sc0000049-1564993656:336332..336451 | BlTCONS00062282-exon-Sc0000049-1564993656:336332..336451 | Branchiostoma lanceolatum | exon |
| BlTCONS00062282-exon-Sc0000049-1564993656:334260..335417 | BlTCONS00062282-exon-Sc0000049-1564993656:334260..335417 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000049 | genome | Sc0000049:334260..341376 - |
Properties
| Property Name | Value |
|---|
| GeneID | BlCUFF030665 |
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