|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000049:315058..320883- Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00062279 ID=BlTCONS00062279|Name=BlTCONS00062279|organism=Branchiostoma lanceolatum|type=mRNA|length=5826bp|location=Sequence derived from alignment at Sc0000049:315058..320883- (Branchiostoma lanceolatum)
AAAATGACCCACAACTATAGGCTAAATTTTGGATTTGCATTGTAGTTTCG
GGAGTGGGGACGCCGTCTACCGTTCAACAATCACATTCTTTTGTTACTCG
CTANATTTCACAGGATGGAAAACTATCTGCCATTGAAGGAGGCAGGACCC
CTCTTCATATCGCATGTGAGCGGGACGACAACAACTGGGTATGTATTACA
GTGTTATGATTCTGGGGTCTTCACATCTTTAAATCACCTTAAGTAAAGTT
AAAGAGTATCATCAGTGCTCACTGTAGAGTGTTGGAAAAAAGATCATGAT
TTCTAAGGAAGATTCCCTAAAATTTTCCATTTTACAGTAGATGATCTATT
TAACCTACTCTGTATGTGTGTATGCTACTGTACTAAAAAAAACAGTAGCT
AATTGAACTATTGGCATAAAACTTTGTCTTGAATTAACCTTTTTTTTAAA
GACTACTTCAAGACATCCTAAATTGTCTTAACCTCATTAACATATCTATT
CAGAGTTTTGGTATAAAACCAGGTGTTCTCAGTCCTATCGTTAGTCACTG
ACGAAAGACAGTGGATACTGTCTGAAACGTCTGACTGTTTCAAAATCTTA
TCCAGTTGCTTGAGTAATTATTTTTGGCGTATGCTACTAGTATTGTATTA
TCAGAAACCACCCATCCATTATTGTCTGTTTCTAGACTTGTATGGTCTTG
TCTCCAATTGCATCTGATTGTTTCCTTTTAAGGATGCCCGCTCTGTTGTG
AGACTGCTCCTTGAAGCCGGAGCGAACCCCAATCTCCTGTGCCAGGGGCA
CTCTCCACTGTCTCTTGCTATTGGCAGTGGGAACGACTTGGTAAGTAGTC
TATTATCAATCAAAACTACTTCTCCTTTTTTCTTGGAAGACAAAGTGTTG
GTTTAAGCTTAAGAATCCATTTTGTATGCTGGATTCATGATGTATATTTG
TCCAAGAGTTACGGCACGATCTGATCCTGATATGTTTGCGCAATTCATGG
CCTGTTTTCTAAGGATTCAAAAGAAGACAGTCAGGCCTTTTTCAAAGGAG
GATAGTGCAAAATTTAACTTCAGCACTAAGGACAGGACTCTTCTATAGAA
AGGCAGTAGTGTACAAAGTTACTTCAGCACTAAGGACAGGACTCTTCTAT
AGAAAGGCAGTAATATTTCTTTTTACTCCTGAATCAGTACCAATGACAGG
ACTCTGCTATAGAAAGGCAGCAATGTACAAATTTCAGCACCAAGGACAGG
GCTCTTCCATAGAAGTACTAATGTTGCATTGTGTTCTTTCTCCAGGCCAT
AGATGAGTTGTTGGAGTTCGGTGCGGACCCCAGCCTACCTCTGTCCCACG
GTGTGGGTAGCGCCCTCTGTGCTGCCTCTTCCATCGCCTGTGAACACAGG
AGACCACCACATGCCAGGATTGCACTGGTATGAGCCAACTTTCATTATAA
CCTTTAATAACTTGTCCGTGGTTAATGAGTAAATGTATGAAATCAATCCT
GTGCAATGTCAAACGATGATTACTTTTGAACATGTTTTTGAGCTATGTTT
ATTGACTGTCATATGGAATTTTGCTCCCTCATTTACTTTGTTAGGTCCTA
GTCAATAGTAGTGCATTGAAGTTGTTTTTGGTGTTGTTGTTTACAGATTG
ATAAGCTGATAAGGGCAGGAGCTGACATCCTGGCACCCATCCCCATTGGA
CCTAAGAAACTGCAGGGCACTGCTGTGGACTATGCCTACTTTGCCTTCCA
CCAAGTAAGTGCAATCATGTGTCATAACATTCTACCCCCCCCCCCTAACA
GTCTGCAAATGTCTCTGATACGTTGAGGCCATTGAGTTCTTGTGCAAATT
GCAGTTATAGATTATAGACCATCAAAAGGCCTTACATGCAATGTACAACT
GGAAATACAAATGTTTTAGGACCTCCTACCCCCATTTCCCAATTCAATTA
TGTTTCCTGTCTTATATTGAAGGTTGATCCTTGTTTTTGAAAATTTTTGT
TTATTTTGACATGTGTTTTTCAAATTGCCTTGGATCACTCAGAGACGTTA
TTCACTCTCTTTTATCTTCTTTTAGGACAGACGTATTGCCCACACCCCCT
ACCACGCGCTGACCCACGCGGAGAGGGACACGTACAACGCCCGGCGCAAG
CTGCTTGCTCATCTCGGAGAGTTACTGCGGGAGGCTGCGGTTGCACGGGA
ACGCGAGATTATAGAGCAAGATGAGAGGGATGGAAGGAAAAGTATGTCAT
GTTGTAAGATTGCAGCTCCTTTGAAAACCTCTTGAAGTCTCAAATACTCA
GGCATTCAGTAGAATCTGGTATATTACCATTTCATTTAGTTGTACTGTGA
GAGCAATGAGCAAGTTTTTGATGTCTTATGAATAAAATCTTTCTGAATAA
ACAAAACCCTTCTACAAAATTAGAACATGGAATTCCACATGTCGCCATAG
TGTTTTTTAACAACATTCTTGTTGATATTGCCACAGGTGCAGGTCCAAGT
GAGAAGTTTGTGTATACAGGTGCAGGGGCCTCCCACCCCACCCTGAGGTC
ACGAGGTAAGGTCGGGTTCAGCACCATGGCAACAGACAGCACCGGTCAGG
AGAAACCACTGGTAGACAAGGAACTGGACGAGTAAGTTTGAAAATTTTTG
TTTAAAAGTATCTTTCTACTCAACAATTCAAGATTAGGAACTTTGTGAGA
AATATACCTGTTTAGAATATCAATGAAGAATAGAGGTATTGCTTTAGATG
TGTCTGTCTGCCCGTCTGCTTGTTGATATTTCCTCATATTTGTGGTCAGC
ATAACTTAAGAATGTCTCAATAGATTGTGATTATATTTTTGAAACAATTG
AAAACAGAGGTCGAGGATTTAGGGCCACCCTGGAAACTTTCCTTAGTGCA
GCAGAACTTCTGTTTTTGCTGTCCTGTTTTCACATTTGAAACTGTACCAT
GTCTGACGTGTGATCTGTTGTACTTCAGGGATGATGAAACAGTGACTGGT
ATCATCACAGTGGAGGTCGGACAGGCGGCAGCCATGAAGGGAGTGAAGGA
ACTAGCAGAGTCAATGTCACGCAAAGCACAGAGCTACGTCAGGTAACGAG
CTAGTTTGGTCGTCATTGTCTAAGATTTATGTCTTATTTGGAAGATGACA
CCCATGTTAAGTGCTAAGTCACTTAAAATATGACTTAGCTATTTTATATT
CATTACAAAAAAGCAACTTCTGTGTGTGTATTGTTGTTAATATGCTGTAT
ATACATGACTTTGTACAATATTTTCATTTGCCCATTATAAAGGCTGTCCA
TTGCTTATTTTGATCAAACATGCTTGTCCACAGTTTCCAGTGCATCTTGT
ACATTGTAGTACCAAGTCCTGAAAGTTGAAATTTAGAACATGTGTACTGA
GATGTTACTGATGACTACTTCATGACTGAGAAAGATTCACACATTGCAGT
TGTTCCCAAATTCGATATGCTGACAGCAATATCTAGTAGATCCTGCAAAA
TTGTAAACATCAATCCATTGTTTGTCCCCTTTAGGAAACCAGTGTTTAAG
TACTGTTACGAGTGTGGTCGGTCGGTGGGAGTGCGCCTGTCTGCCTGTAC
CAGGTGTAAGGAGGTGTACTACTGCAGCAAGGCCTGTAAACTCAAGGCCT
GGAACGCCAGGCACAAGGAGGAGTGCGTCAGAATCGGAGGTAAGTTTTGA
AACATTCCCTTCGAGACTGACTTTTATGAGGAAAAGCGGTGTTGTTTTCT
TTTTAAAGGGCTGTTTTGATAAGACATATTCTAAGACACTGTGCAATATT
TGATTTTTTAAGTAGCATTTATGTACCATTCTCCTGCGCAGGGCCTTGCC
AGTGGACTGATATATACACTATATACCTTGGGGAGGCTCTGCTAAACCGG
GCTGAGGTTTCCAATTTGCTGGGTGTGGCATCTGACCAGCTGTCAGCCAA
TTGGCTTTACCTAAAGAAAGCATTCAGGCGATTTTCTGATTGTCAGTGAC
AGCTGGTTAGAGGCCAGGCCCAAAAAAGTAAAAACCTCAGCCCGGTTTAG
TAGAGCCTCCCCAAGGTATATTGTATAGGCCACGGCGAGGTTCTGCATAG
TACATGTATCTAAATCCAAATGTGTAATGTCAAATGTTTTATTTGAAACT
AATGAAGTTACCTATTATTCCTAAAAAGACATCTTTCTTGTTTTAAACCA
ACAGGTAGGGAAGGTAGTCCAAAGAGCAGGGGGGACCGTACTCGCATCGA
CAGCCCCACCCCAACCACCAACCCCAACCCCAACTCACGAGTCACAGTCG
ACCAACTCATGGGGAAAAGTCTCAGGAACAACAGCACCTCTAAAGGAGCC
AAGAACACACAGAACAAGACCAAAGCAAGAAGCACAATCAGTTCTGTCAC
GGGGTCTAAGAGCGACGTCGGAAGGAAGAGTTTCAAGTTGGGGTCCAGAG
GAGGCTTGAAGTCGTCTGAGACGTCCAGTGTGTCAATCAAGGAGAATTAC
AGTTTTAATTGATTGATAGATGTCAATCATCAATGTATACTGCCTACAAT
TTTCAAATTCTTTTTCAAAGATTATTTGTAAAGAAAGACCAGAGATATAC
TTTTATTATCTTGGCCATGTGAGATTGCATATTGTTACATTCTCTGTGTA
TGATATGCTAAATGAAATTATTCTTATCCTTATATAAGTTAAATGAATTT
GGAATTTGAATGCAATCCGTCCAAGTTTTGTACCTTTGGTGCCATAGAAA
AATCATTCCATCCATGTANCTTAAATAGGTTAAATGAATTTGGAATTTGA
ATGCAATCCGTCCAAGTTTTGTACCTTTGGTGCCATAGAGAAATCATTCC
ATCCATGCATGAGTGTTAAAGGGCTAAACAAACGCTGCATTTGTGAAACC
AGGACCACTAACTTTATACTAGTAATATTGAAGAATAGATTTATTTTGTA
GTTATTGTAAAAGTTTTATGAATACATGTGAAGAATTGACTGTTGGGCCT
TTCAGTCCCATATGTGTGTGACCACTGACTAAACAACTTTTTATTTTGTC
CAAGTTTCCAAAGATTGAAATCTTGTTTGATATGGTATGTTTATGAACTT
CTTTGAATAGGATACATGGTGTTACATGTATAACACATGATTGTATAATT
GAAATATTTTTAAGATAAAAGACTNTTTAAAATAAAAGACTTAAGATTGT
TATGAAGGGCTAATGACATTATCCAGTTGACTTATTGGGTATTTCTATCT
GTTGTATGAATCGTATTCAATTGTTTGAATTATAAGACTCATAACATTAT
ATATACATAAGTTAAACAATAAAATTAAGTATGAAGCATTTTTATATGTG
TGAATTTGATATTGCATAAGCTACTCTTAAAAACATCTGAACTTATCCTT
CCCAAGCTATGAATATGTGAGGTTTTGTATTTACTCATAATCAGCATTTT
TATCTATTTCATTGAAACTTCGGGAAGGAAAATTTCTATTTGCAATATGA
ATAAGTGCATGTTACACATACATGTCAGATTATTGCTATGCTTATTCATA
AGTTATTTATGTATACATTCATGCTGAGACTATCAATTTTACTTTTGATA
GCAAAATATTGCTTTTGATAGATGTTCTTTGTCTTAAGAACTTTTAAAGA
AATAAGCAATGTATGAATTTATGCTTTATTGATATACTCTTGATACTGTT
AATAGAAAGCAATGTGAAGGATATTTGAGGCAAGAAAACAGGATGGTATT
GGAAATCTGGGATGCAGCATTTTGGTTACCTTTGTGGTAAGATGTTGTTT
TACCCTTAATATGAAATGGTCTATCC Coding sequence (CDS) from alignment at Sc0000049:315058..320883- >BlTCONS00062279 ID=BlTCONS00062279|Name=BlTCONS00062279|organism=Branchiostoma lanceolatum|type=CDS|length=633bp|location=Sequence derived from alignment at Sc0000049:315058..320883- (Branchiostoma lanceolatum)
ATGGCAACAGACAGCACCGGTCAGGAGAAACCACTGGTAGACAAGGAACT
GGACGAGGATGATGAAACAGTGACTGGTATCATCACAGTGGAGGTCGGAC
AGGCGGCAGCCATGAAGGGAGTGAAGGAACTAGCAGAGTCAATGTCACGC
AAAGCACAGAGCTACGTCAGGAAACCAGTGTTTAAGTACTGTTACGAGTG
TGGTCGGTCGGTGGGAGTGCGCCTGTCTGCCTGTACCAGGTGTAAGGAGG
TGTACTACTGCAGCAAGGCCTGTAAACTCAAGGCCTGGAACGCCAGGCAC
AAGGAGGAGTGCGTCAGAATCGGAGGTAGGGAAGGTAGTCCAAAGAGCAG
GGGGGACCGTACTCGCATCGACAGCCCCACCCCAACCACCAACCCCAACC
CCAACTCACGAGTCACAGTCGACCAACTCATGGGGAAAAGTCTCAGGAAC
AACAGCACCTCTAAAGGAGCCAAGAACACACAGAACAAGACCAAAGCAAG
AAGCACAATCAGTTCTGTCACGGGGTCTAAGAGCGACGTCGGAAGGAAGA
GTTTCAAGTTGGGGTCCAGAGGAGGCTTGAAGTCGTCTGAGACGTCCAGT
GTGTCAATCAAGGAGAATTACAGTTTTAATTGA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| BlTCONS00062279-exon-Sc0000049-1564993656:320696..320883 | BlTCONS00062279-exon-Sc0000049-1564993656:320696..320883 | Branchiostoma lanceolatum | exon |
| BlTCONS00062279-exon-Sc0000049-1564993656:320044..320151 | BlTCONS00062279-exon-Sc0000049-1564993656:320044..320151 | Branchiostoma lanceolatum | exon |
| BlTCONS00062279-exon-Sc0000049-1564993656:319457..319588 | BlTCONS00062279-exon-Sc0000049-1564993656:319457..319588 | Branchiostoma lanceolatum | exon |
| BlTCONS00062279-exon-Sc0000049-1564993656:319130..319237 | BlTCONS00062279-exon-Sc0000049-1564993656:319130..319237 | Branchiostoma lanceolatum | exon |
| BlTCONS00062279-exon-Sc0000049-1564993656:318643..318808 | BlTCONS00062279-exon-Sc0000049-1564993656:318643..318808 | Branchiostoma lanceolatum | exon |
| BlTCONS00062279-exon-Sc0000049-1564993656:318253..318397 | BlTCONS00062279-exon-Sc0000049-1564993656:318253..318397 | Branchiostoma lanceolatum | exon |
| BlTCONS00062279-exon-Sc0000049-1564993656:317792..317905 | BlTCONS00062279-exon-Sc0000049-1564993656:317792..317905 | Branchiostoma lanceolatum | exon |
| BlTCONS00062279-exon-Sc0000049-1564993656:317195..317349 | BlTCONS00062279-exon-Sc0000049-1564993656:317195..317349 | Branchiostoma lanceolatum | exon |
| BlTCONS00062279-exon-Sc0000049-1564993656:316197..316679 | BlTCONS00062279-exon-Sc0000049-1564993656:316197..316679 | Branchiostoma lanceolatum | exon |
| BlTCONS00062279-exon-Sc0000049-1564993656:315058..316105 | BlTCONS00062279-exon-Sc0000049-1564993656:315058..316105 | Branchiostoma lanceolatum | exon |
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000049 | genome | Sc0000049:315058..320883 - |
Properties
| Property Name | Value |
|---|
| GeneID | BlCUFF030663 |
|
