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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000049:1216525..1220215+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00062111 ID=BlTCONS00062111|Name=BlTCONS00062111|organism=Branchiostoma lanceolatum|type=mRNA|length=3691bp|location=Sequence derived from alignment at Sc0000049:1216525..1220215+ (Branchiostoma lanceolatum)
TACTACCGACATATACTGGAACAGTTTAGTCCCCCCTCAACGGTTCTGTT
AGAACCGACCGAAGTTAATTCATGCCGTCACCACGAAGTTCAGGCGTCAT
AGTTCATAGTTAACGAACGCATCTTGTCCGACAAGTTTTCCTTAGTTGAC
AGCCAAGTTACACGTCGTCAGCAGTGCACCGTATTCCCAACATTATGGCA
GGTAAGGCGTTAATTTATACACTTTACTGTGTACAACTGTTGAAAGGTTA
GTCTTTCTCCAGGACCACTATTGTGGCTTGAATCTTACTCAAAATCAAGC
TCAATGTGACGTGTACGAACTGCCATACAAGTACCAGAGTTAGTACATCA
TGTGCTCTAGTGGGTGTGGCACTAAGAATGCCATTAACAAAGAAGCCTTG
CTGGTTCACGCTCTATGCCTATGGCATGGATCATTGATCGAAGCACGCCG
GCCATGACTCAGCCCAATGCAATTATGTGCCCATGTTAGCAGAGGAACAC
AGAAGCACGCTCGGATAAGGAACAGGGGAGCTTGAACTGACAGACCAGGA
CGCCTTTCCTGAGTCTATCACTTCTACATGTACGGGCCAGGTTTACATTG
GTGCACTCGTACTAAGGCCATATCTCGATCACCTGCATTAGTCCCCCCCC
CCACACGTAGAAATAGAAAAAGATTACTCAATTGTTTGTTCGTTCGTATT
TCATTTGGCGATATCTATCGCCAATTGGCATGCAGTCAAAGCCAATTATT
GGCATCATTATCATAACTGGGTGGGCCGACTACTCTCTCCTCGTAGCCAG
GGGGAGCTTACAATTACCGTGGCTAAAAATCAACGGTCTGGAAGAGTTCA
CATTCGGCGCTATCTGGGGAGACCTCAACATGACAGTAATTGCCCAAGGT
GCGGCCATAGTACTGTAGCACTAGGAGCACATCCTTATCCGAAGCTAGGT
ACTCATTTTCACCTGAGTCGAGTGAGGAAATATGTGTACTTTTCCAAGGA
GCACGGCACTGGGGTCTGCCGGGGATTCGAAACCAGAACTATTAGATCTT
AAGTCAACTACCCTAGCCACAACACCACATTTACCTTGAAANACACCACA
TTTACCCTGAAAATTATATAAGGACAGTTCTGAAAACATTATTATGACAT
ATCATGATCCGGCACATCACTTTATCCGATATCAATTCATAATCTTATCG
TCATTATGTCTGTACCGTAACCTCGTCTCCAGATCTGAAGGCCCTGATTG
CAGCACGGATCCAGAAGTTCACGGCCTGCTTCAAGGCTAACGACATGAAA
GGTCTGTTTAGCATGTACATGGTGGACTGCAAGATCATGAAGACAGGAAT
GGACACTGCACACGGCCACGAAGGTAAGGATATAGTCACATTATAGAGCA
TTGTTGGCTACTGCCCTTTAAGAATTGTAATGGGAAAAATATTAGAATTA
CTGAGCCAGGAAACCCCCTCTCTCTCAGGCTGTATCTCTTCCTGTCTCTG
TCTGTCACGGTGTGTTTATATGTGTGTTTATAATCCGAAATCGCGCATCA
TGGCGGATACCGACGTTTCCGAGTAAATCCGGACAAATCCGTAGTCCTTG
CTCAGATCCGAAGTTACACTGCAGATCCGGCAATTCCGGCACCTGACTCA
GCCGAAAAGAATTACTTAGACACATATCACTTCAGTATTGCATTTAGTGA
GTTTTGAACTTGGAAATGTTGAATTGTGAAATGATGTTACCAGCAGATAT
GCTGGAATGGATTTCCTCAACTTCCTGTCATTGAATAATGTTTTGGGTAT
CGTTAAGTTGTACGTGTACCAGTATTTATGAATAACCAACCACTTTATCT
AAGTTCGTGTGTTTGATCTGTACGTATTCGTGGCATATACAGATATATTC
TGGATCGAAACGTGCCAAAGATTGTGGAAAGTTCGTATGTTCGTGTGTGG
AAAATCTGATCATCCCATAAACTCTTGGAGTATAATCAAATTACCAAACT
GTATTGACTGCAGGATTAGGGAAGGTGGTGGCAGGTTTTCACGCTCTCGG
TGTGACGACCGTGGAGAGGAAGTCAGAGGAAGTCGGACCAATGGGCAGTG
ACGTCATGTACGAGCGAGGCGTCTACACTATGAAGACCGAGGACGGCACC
CTGGCTGACAACGGGAAGTAAGTCATTTTGTTTATACTTGTTGTTCATTA
TTTTCGTATGTGTACATGTGTGCGTTTGTGTGTGTGTGTGTGTGTGTGTG
TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTA
TGTGTGTGCGTGTGAACAGCATAACTCGAGAAGTCGTCAATGAACCTTTA
AATATTTGGTATGTTGGTAGGGTTTGCAGGAGGAAATAATAAAATTGAGA
AGACCAACATAGTGATATGTTATTTATGCAAATTAGGACCGAATTTGCAT
AATTCATGAAGAACATTTATATTTCAATCGTGCCTAATATCAGGAACTAT
CATACTCAGTACGTACGTAACTTTCTTTGAGAGGAATATAAATAATGCAA
ATTATGACCTTACTTGCATAATCAATTAGAAAACTGTTTCATACGTTTGT
GGTAAATGATAACATATACGTATAAGTGACACATGAAGGTTAGATAAAGG
TGAAAGGTAAAAAATTCCTGGATTGAAAGAAAAATATTTAAATGACATAG
TACTTTGCTGTAAAAAACGTGCCGTTTCTCCAGGCTGAAATACTCTAAAT
ACATTTATATATGTTATATTATGTTAATGATATTAAGTTGAAATATTTTT
TCTTGATATTTTAAAGGTACATTGTGATTTGGAAGAAAATTGGCAGTGAC
TGGTTCCAGTACATCGACATCTTCAACACAAACAACGCCTGAAGATTCTA
GATATACATTCACAAAAAAGGAAGAGCGTCAGAAAGATGGTCACGAAAAA
TGAGTCGTATGGGATAGAGCAGCATTGGCTTTTGTTAACGCGTCATGCCC
CAGTCTTGCTTTAACCTCAATATTGGAACCCATCCTTTTCTAGTCCCTAT
TCGCTCCTCTGATCGCTTCCGTATTCCCTTGCCAGCGATCAGAAGAGCTA
TCCAAAACTAGAAAAAGATATCAGACTATGATAAACGATAAATGAGGATC
AATTAAGTTTCCGATTCTGGCTTAAATTTTACTGACATGTAATGCCCAGT
GAGCCCCACAACACACTTTACTGATAGACAATAGACGTGTGCAGTATCAT
CATTATTATATCCCTTTAGTATTCTGTGCATGCTGGCTTTTGTAAACACC
TCGCTGATGCATATGGGCATAGATTTCAACCCATGAGAAAAATGTTACAA
GAAGATGCGAAAGAACAAAAATAATGAATTTATCGTTTGGTATACCATGT
TCTGTAAGTTCAGTCATTTATAAATCCTTCCTGACCGCTTAGGTTTCAAA
ATGAAAGCAACTTTTCTTGGGATCAACTTTTTGCACGCTCTCATCAATTT
TGCAGTGACCGGAGGATGTCATCCATGTTATCAAATCATTATGGCCTTAA
CAAGAAAAAAGATGAGGGTCACGAACAATGAATCTTATAGAATGGCAGTA
CATGTATCACCTTTTGTCGAAAGGTGTCTAAGACGAGTATTGCTCGTAGA
CCTCTTTTGCTGCAATAAATGGCGGTTGTACCAAAATTGAA Coding sequence (CDS) from alignment at Sc0000049:1216525..1220215+ >BlTCONS00062111 ID=BlTCONS00062111|Name=BlTCONS00062111|organism=Branchiostoma lanceolatum|type=CDS|length=378bp|location=Sequence derived from alignment at Sc0000049:1216525..1220215+ (Branchiostoma lanceolatum)
ATGGCAGATCTGAAGGCCCTGATTGCAGCACGGATCCAGAAGTTCACGGC
CTGCTTCAAGGCTAACGACATGAAAGGTCTGTTTAGCATGTACATGGTGG
ACTGCAAGATCATGAAGACAGGAATGGACACTGCACACGGCCACGAAGGA
TTAGGGAAGGTGGTGGCAGGTTTTCACGCTCTCGGTGTGACGACCGTGGA
GAGGAAGTCAGAGGAAGTCGGACCAATGGGCAGTGACGTCATGTACGAGC
GAGGCGTCTACACTATGAAGACCGAGGACGGCACCCTGGCTGACAACGGG
AAGTACATTGTGATTTGGAAGAAAATTGGCAGTGACTGGTTCCAGTACAT
CGACATCTTCAACACAAACAACGCCTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| BlTCONS00062111-exon-Sc0000049-1564993656:1216525..1216725 | BlTCONS00062111-exon-Sc0000049-1564993656:1216525..1216725 | Branchiostoma lanceolatum | exon |
| BlTCONS00062111-exon-Sc0000049-1564993656:1217757..1217897 | BlTCONS00062111-exon-Sc0000049-1564993656:1217757..1217897 | Branchiostoma lanceolatum | exon |
| BlTCONS00062111-exon-Sc0000049-1564993656:1218538..1218691 | BlTCONS00062111-exon-Sc0000049-1564993656:1218538..1218691 | Branchiostoma lanceolatum | exon |
| BlTCONS00062111-exon-Sc0000049-1564993656:1219341..1220215 | BlTCONS00062111-exon-Sc0000049-1564993656:1219341..1220215 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000049 | genome | Sc0000049:1216525..1220215 + |
Properties
| Property Name | Value |
|---|
| GeneID | BlCUFF030609 |
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