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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000048:612804..619829- Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00061679 ID=BlTCONS00061679|Name=BlTCONS00061679|organism=Branchiostoma lanceolatum|type=mRNA|length=7026bp|location=Sequence derived from alignment at Sc0000048:612804..619829- (Branchiostoma lanceolatum)
TGGGAACCGAGGCAGGCTGAGTCGCCGGGATAAAACCCCACCGCCGCCGC
CGCCTGGGCTTGATGCTGTCACGTCGCCGGGTTGTGGCATCACGCAAAGG
TTACGGCGATATGTAGATGTCACCCTCCGCGCGTACGCGTCTCAGTCCCA
CGGCCCAGCGCGACGTACAGGGTTATTTTATTTCGTGGTTACGTCGCCGG
TATGATACATGCGGGGCAGGCGGCGGCGAGGTCGCCTGATTAATATCCGC
GCGTTTGATGCCTGTTTGCGGAAGATCAAATTTACTTTATTGCCCGTTGT
TTTGACCTAACCTTTGCGGAGAGGTTGCGACACGCAGCCGCAGTGTCACC
AGCAGAGCAGGGAGGTCTAGTTCAGGGCTTGGCCTCGCTCTGTTGCGGTC
CCCAACAACTTGGCTCGGGAAAATGGAAGTTAAAACACGAGAGATAACGC
GATGTTACTGTAGTTTAAATGACAGTGGAATAAACCGGGGGAAAGGACAG
GGCTACGAGCGTTGATATCTAGTAGACTGGAACTAAATCTGCTCTGAAAA
AAAACCCGTCGTTGGTGAGAAGCCCCCAGGGCGTACAGTCAAAGCAGGGG
CACTGTCTAAGGATTTATCGGCCTACAAGGTTCAGACTTGTTTATAAAGG
CCGGGGTGGCAGGGGCAAGTTGCTCACGAATGCCCTCAACAACCGATAAT
GGAGAATGTCACCTCCTAAGAGGATAAAAAATCTGACCTTGGCTCTGCTT
TAATACTCAGCATGTTCCATGCTGACCCCTTCGCGGCCCCTGTAAGGCTT
CCAATTGACACGTACAGGTCCTTCAGAACAATGGTGTCTGCTCGGGCAAA
TGCGCTTTTTGTGAACATGGATAATCTGTGCTCGGACTCCCACAGCAACG
CTTTGTTTCGCTGAATGTACGTATGACTCAAGCCATGCTGCGGCTGGGGA
AGCTTGTGATAATACAGAGTACGGGAAGAAGTTTCCCGTGCGGAGGCGGG
TGTGTGGTGCGAGGTGTACGGGCTTTCCCACAGGACTGTCGCGAGCACAG
ACTTAACTGTTTGGCCTTGGTCGGGGTGAGAGCTAATTTGTAGGATTTGG
AGAGAGAATCCCCACCGCAACACCTTACTGTATATTGCTGTATGTTCGAC
AAAGGTCACCCGCTTGACTCGTGTGGTTTCTGACTCAAAAAGAGCTCACA
TTTGCGGTGCCGGTGAGCCCTGGGTCCCCAGTGGGCCTTTCTCACGGAAA
GGGACGCTGACAGGGCCACGGGGCTCCGCGCGCTTTCACTTTTTCGGAGG
GGGTGCGCGCGGCTGGCGAAACATCCCAAGTAGCTGCCAAATCTTCAATT
GATCATTTGAAACCGAAAGGTTATAATGTCACCGCCCCCTGTTGAAAATA
TTGTACAGTGCGACCTTTGTTTAAAGAACTCTTTACACCATCAATCTTGT
AAGTGTCTGGCATTTGCCCTAAAACAAAAAGTTATATATACGCAGTATTT
TGCATGTCAATGCCGGTGGATTTTGACAGTCCCCTCACGTCTCAGGTTGG
AGGTGGCTATTGTTTGGTGCGTGAGATAGAGTTTAAATACGAACCAGGCT
TCAGGAAAGGCTTCGCTGGGGCAGAGATTTAATTATTTTCGGCGGATTCC
GACAGTGTAGGCGCTGAGAGCCAGAGCTCAAGCCAGACGTAAACGTACGC
GCGCGGCCGCTCCGTTCGCGCCGGAGTGCGACGTGGTTTATGGTTTTATG
GTGAACCGGGGCTCGTGGCCGGCGCACACACGCCCCCTTGAGAAGGTGGG
AGGAGCTAGACGAAGGGGGGCGGAGCCGGGAGGAAACTTCACTCTCGCGC
CTCCCCAAAACCCCTCTCGGGTCGGCCTCTTGGACCCAGACTGTAGGAGG
GTAGAATTTCAGCCAGATCCCTTTCAGAGTGTGGAACTATTCTGCCCGGC
GAGTAAGCCGAGAATGATGAATCGCTCACTATTTACTCGCCATAATAGAG
GGACCCCATCTGGATAAAAATAGTGGCCTGGGCTGAGGGTTACGGAGCGG
GCTGTTCGCCAGGCCGCGGCTCGGCCCGACTCCTGCGTGCCGATACCGGG
CGCAGGGATCGGCGGCTGCGGTCGGAAGGCAAAGGCAAGCCCCGCAAAAT
TGTATGGGTCAAGGAAGTGGCCGGAGCAACATGGGGTCAGACCCTGCTAT
CGATTACACAGTCGTTTATAATTTATTGTTTGTGTAACTTATTGTTGGTG
GGCCTCCCATTTTTCACACCTTAGAGTCACTCCGTCCGCGGTCGTTATAA
ACAATATTTACCGCCTTGATTGGCCTCCTTAACCACATGACCCGAACAAA
GTGGATTTCCTATGTAAACATTCAGCGCAGGGATATATTGACAATATGTC
CAAGATAATAAACGGCACTGCCAGCCAATGGGATCAGCGAGGGCTGCACG
GCGTGACAGGCCCCCTTTACCCTCGGGCTATGACCAGTCGCCTTTAATTA
TCAGTTACTAATAGTCTCCTTGAACCCCCCTGACATGTCACTCCATATAT
GGTAGTAATTGTCATAGAAACCCGACAGTTTCAACACGAGTGTCAAAGTT
CAGTATATACAGACATACAAGCACATCCTCTCATCAAAAAATTACTCCGC
TGTCCGCAAAAGCGTTCAATTATTTTCTCCGCATTTCTCATTGGACTTCT
CTTCATGAGAGGGGTGCTGTAGCGCCAAATTTTGGTCTCCTACACGTAAG
TAGCCGACGGTGGGCGTTCTGCAATTTTGAGAATTTTCCGGGTATTTTTT
GGCGCCCTTTCACGTATTACGTTGCGATCTGACTAATCTTTTAACCCCTG
CCTTCTCTCCTCCATTCGACTCTCCGCCACCGCGACCGCCGGGCCGTAGC
GGGTCGCAGTTCAGTGTACCCCGCCGCTGTAATATGGCGATGGCAGTCAG
TACATGGCGAGAACCGGGTGAAGACCTCTCGAGCCCGGACAAGCAGCAGC
AGCAGCCGGCACCCGTCCCGGGACCAGGGCCGCAGCAGCCGCCGCCGTCG
CAGCCCCCAGGGCAGACGCAGCAGTCGACCCCGGGTCCGCAGCAGCCAGG
CCCGCCGACCCCAAACCAGCAGACGCCGAACGGCGGGACGATGCCGCAAC
AGACGCCGACGGCCCCGACGCAACCGGCCTCGCAGCAGGGCCAACAACAG
TCCACCCCAACCACGGGCAGCCAGAGTCAGCACATCGAGTGCGTCGTGTG
CGGGGACAAGAGTTCCGGAAAGCACTATGGCCAGTTCACATGCGAGGGTT
GCAAGAGTTTCTTCAAGAGAAGCGTCCGTCGGAACCTGACCTACTCCTGC
CGGGGCAACCGCACCTGCCCCATCGACCAACACCACCGGAACCAGTGTCA
GTACTGCCGGCTCAAGAAGTGTCTGAAGATGGGCATGAGACGAGAAGGTG
TGGGTCTGTATTCCTCCATTCTTTGCTAATTCTTGGATTTTCTGTACTTT
TTGCATTTGTTTTGTGAAGTCCGATGGTTGCCATGCTTACTTTTGCGAGT
GTGTAGGTGTAGTCGACAGGCAGATACTACCTTATATTAACATTGTGTGT
CCCTTCCGTCACCGTCCAGCGGTTCAACGGGGCCGGATTCCCCCGACCCA
GCACCCAGCCGGCGGCCAGTACGCCCTGACCAACGGAGTAGACCCGATCA
ACGGCCACTCGTACTTGTCCGGGTACATCTCTCTCCTGCTACGGGCTGAA
CCCTACCCGACCTCGCGCTATGGCACACAGTGTATGCAGCCCAACAACAT
TATGGGCATTGACAACATCTGCGAGCTCGCGGCTCGCCTCCTCTTCAGTG
CCGTGGAATGGGCCAGGAATATTCCCTACTTCCCCGAGTTACAAGTCACC
GACCAAGTAGCGCTGTTGCGCCTGGTGTGGAGTGAGCTATTCGTGCTGAA
CGCCTCACAGTGCTCCATGCCCCTTCACGTCGCCCCATTGCTTGCCGCCG
CTGGCCTGCATGCCAGCCCCATGTCAGCCGACCGAGTCGTGGCGTTCATG
GATCACATACGCATATTCCAGGAGCAAGTAGAGAAACTGAAAGCATTGCA
CGTGGATTCTGCAGAGTACAGCTGTCTCAAGGCGATCGTGCTCTTCACCT
CAGGTAAGTCGAGTGGATGACCCACGCCACGCCATGCAGCCATGATGGCC
GCCAAAACAAACTTTTCTCCGCCCGGTCTGTCGGGTCAGATAGCCTTAAA
ACTAGGACACCTTCATTTCACTTTCCTCTCGTATTTACTCTGTAACATGG
ATACCTCTAACCTCTCGCTAGCTATACTTCTTCTCGGGGGGAGACAGGGA
GGTGTAGGTAGCTAGACGAGTGAGAACGCCGTGTGAAATAGCTTCCAAAT
GTTGTTTGGTATGTCTGTACACTGGCCTTGGGACACATACCCGGGTCATG
GCGCTGAAAAGACGTGTTGCGAAATCGGGGGAAATCTTTTTGGGGGCGAC
AGTTTGTCCCATCCCCGCTCGTGTTGTGGAATTACTCGTGTGTGGAGCCG
GTTTTACGCCGTTGTAAACGCCATGTTGACGTGGTGTGTCAGACGGCGAG
GAAACTTAGGGGGTGGAACCCGTTTTGTGTTCATGAAAGGGGTTGGTCGT
CAGGGAATTCAGCACGGTGTGAAGCGAGACCGAAAAACATCTGACGAGCC
ACCTTTTTGACAGTAGGGGTGAAACGTATGACAGAAATATCAGGCTGACT
AGACAGGCACGTCGCTAGGCTCTTGTGTACGTCAGGTAAGGAGGGGTTGG
TGTGTTGCTTGTCTGTAGTAAGTGGTAGTACGTAGCGTGCAGACGACGCC
GGCATTGCATGTGTATACACACACACGGCGTGCCTGCTTACCAATTCAGT
GCCGACATTATTACAAGCTACGGCGGTGCTCTGGGTTTCATCTTCGCCTG
TAGAATGATCTGCCCCACCGCCACGCTATCTAGTAAAAGCCAGGCACTGG
TTAAACACTCCAGTAAATTTCCTGACCAAATTTATAGTGTTCTCCGGCAT
GCCAGAACTACTTATTGATCATTCCCAGTCAATTTCCCCTGCAAAGTGTT
ACGTTTGTGATTGCCCCAAATCACGACTGCAAACGGTAGTAATCCGGGCC
GGACTGCAGCTAACCGCGTGGCGGTTTGGTCGGTTATTGCTGTCAGTCTC
TCTTCATATTTTGGCGGGACGACAGTGATGTTAACTTTGTTAGTATCCGG
GGTTGATAAGCCATAGGCTCGGGGTCAATTCCACCGGTCACCCCGATAGT
TACAAATCCTCCTTTGATTGTTGTGGTGACCCATACATGCCTATGCTTAC
CTAATCCTTTTGTTGGCTTGCCGTCTTTATTCGCTACTTCTGGAGTTTTC
CGACGCTACTAGACATGAGTCTTATCTGTCTATCGACGTTTAGTAGTGTT
TTGACAATGTTTTTATGGCGACGAGGACAGGGGACTATTGTTCTGTGTAG
TGTCTGCCTTCCATGCGTCCCCTTAAAAGATTAGCCTTATTTGAGTCAAT
TTGTTGGATACTTTATCAACTATCCTAAAATGTTGTTTAGCTTAAACCTC
CAGAAAGTGAGGAAAGCTTTTTTTCATGTTGAAAAGTGTGTTTTTGCGAG
CACGTGGTAGGGTAGAGGCAGCCTTGGAGGCCAGGTGTATGTGTGTGTAA
GATGCCACCCTGGCACTAAAGAAGGGGTCACGGCCGCCTCGCCAACTCAC
AAAAAAATGTTTGGAAAGTCAGTCAACTGTACTTATATGACGTGATTATC
ATGCGGGCCGATCTCTACCGTGTATTGTTTTGGTCATTTGGGTGAGAAAA
TGTCGCCCTTGTTTTTATCAATGCTTTTTATCGGCTAGTTGTGTTTCGTA
ATGACTTCCCTGTCCACTTTTAAAGTGTCTGAGCCGTGCCAGATATTTTT
GATGACTCAGAGACTAGTTTGTGACACTAGCTGGCATTTCTAACACTGCA
ACTTACGGCAAAAGATGTACTTGTGCGGTATCTTTGAAAGAAAATCTTTG
CAATACCAAGAAAACTAAAGTTGGCGCCAAAGTTTGTTGATTATCTTTGG
ACGGGCAGGGGAAGGCGGCTTGCTTAGTCGAACTTTGAAATTGCTTGGCA
TATTGTCATAATATTTCGGATATTTGATTGTGTATATGGCATCAGAATGT
ATTCTATCCGATGGTATTGGCCCTTTCCGATGTTGTTGTCGGTGTTTTTG
GTGTGTCTTTCCGTGTGGTTTAGAGTCTGATGCCCACTTGTGTAGACTGA
AGTACTGGTACCATTACACCAAGGGGTGTTAGCTGTCTACTACAAAGTTA
GCCTTGTCGTCCTAAGTGTTCTTTATTTTTCCTGGTGTCAGACCAAAACT
TTGGCGGTTGTCTTGTAGGAGATGTTTGAAGGACTTTGAGTAAGGAATCT
TCGTTCAGAACCTTGCTAGGGTTCTCGGCTGCATTTGCGTTTCACACAAA
GCGAAGGGAGGTGTGCCACTTGTGCTCAAACATGCAGCTGAACTTTTGAA
GATTTTTTTAGGTTTAAGTTTAAGGGAAGCGGTCTTCTCGTACGGTGTTT
TATTTTGTCGCCGTTTCTTGAATGTAGAAATGAGTTCTGGGTGACTGTGC
AACTTGGGTTGCAATCCTTTCTGTCTTTTACTGTAACCTCCAGCTTTGGA
CCCGTCTTGTTTTAGTCCCACTGGCGTTTGTACTAACACAAGTCGCTTTA
TGAATTTCTTGACTTTGTGCAGTTGTTTTGTTGTTGTATACGGTTTTACC
CGGTTGTTGACTTTGTTTCTCCGTTCCTGTGCCCTACCACAGATGCATGC
GGCCTGTCGGACGCGGCTCACATCGACTCCCTGCAGGAGAAGTCGCAGTG
CGCGCTCGAGGAGTACGTCCGGTCCCAGTACCCCAACCAACCCACGCGGT
TCGGCAAGCTGCTGCTGCGCCTGCCATCCCTCCGCACCGTCTCCTCTTCC
GTCATAGAGCAGTTGTTTTTCNACAG Coding sequence (CDS) from alignment at Sc0000048:612804..619829- >BlTCONS00061679 ID=BlTCONS00061679|Name=BlTCONS00061679|organism=Branchiostoma lanceolatum|type=CDS|length=1230bp|location=Sequence derived from alignment at Sc0000048:612804..619829- (Branchiostoma lanceolatum)
ATGGCGATGGCAGTCAGTACATGGCGAGAACCGGGTGAAGACCTCTCGAG
CCCGGACAAGCAGCAGCAGCAGCCGGCACCCGTCCCGGGACCAGGGCCGC
AGCAGCCGCCGCCGTCGCAGCCCCCAGGGCAGACGCAGCAGTCGACCCCG
GGTCCGCAGCAGCCAGGCCCGCCGACCCCAAACCAGCAGACGCCGAACGG
CGGGACGATGCCGCAACAGACGCCGACGGCCCCGACGCAACCGGCCTCGC
AGCAGGGCCAACAACAGTCCACCCCAACCACGGGCAGCCAGAGTCAGCAC
ATCGAGTGCGTCGTGTGCGGGGACAAGAGTTCCGGAAAGCACTATGGCCA
GTTCACATGCGAGGGTTGCAAGAGTTTCTTCAAGAGAAGCGTCCGTCGGA
ACCTGACCTACTCCTGCCGGGGCAACCGCACCTGCCCCATCGACCAACAC
CACCGGAACCAGTGTCAGTACTGCCGGCTCAAGAAGTGTCTGAAGATGGG
CATGAGACGAGAAGCGGTTCAACGGGGCCGGATTCCCCCGACCCAGCACC
CAGCCGGCGGCCAGTACGCCCTGACCAACGGAGTAGACCCGATCAACGGC
CACTCGTACTTGTCCGGGTACATCTCTCTCCTGCTACGGGCTGAACCCTA
CCCGACCTCGCGCTATGGCACACAGTGTATGCAGCCCAACAACATTATGG
GCATTGACAACATCTGCGAGCTCGCGGCTCGCCTCCTCTTCAGTGCCGTG
GAATGGGCCAGGAATATTCCCTACTTCCCCGAGTTACAAGTCACCGACCA
AGTAGCGCTGTTGCGCCTGGTGTGGAGTGAGCTATTCGTGCTGAACGCCT
CACAGTGCTCCATGCCCCTTCACGTCGCCCCATTGCTTGCCGCCGCTGGC
CTGCATGCCAGCCCCATGTCAGCCGACCGAGTCGTGGCGTTCATGGATCA
CATACGCATATTCCAGGAGCAAGTAGAGAAACTGAAAGCATTGCACGTGG
ATTCTGCAGAGTACAGCTGTCTCAAGGCGATCGTGCTCTTCACCTCAGAT
GCATGCGGCCTGTCGGACGCGGCTCACATCGACTCCCTGCAGGAGAAGTC
GCAGTGCGCGCTCGAGGAGTACGTCCGGTCCCAGTACCCCAACCAACCCA
CGCGGTTCGGCAAGCTGCTGCTGCGCCTGCCATCCCTCCGCACCGTCTCC
TCTTCCGTCATAGAGCAGTTGTTTTTCNAC
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| BlTCONS00061679-exon-Sc0000048-1564993656:617085..619829 | BlTCONS00061679-exon-Sc0000048-1564993656:617085..619829 | Branchiostoma lanceolatum | exon |
| BlTCONS00061679-exon-Sc0000048-1564993656:616383..616930 | BlTCONS00061679-exon-Sc0000048-1564993656:616383..616930 | Branchiostoma lanceolatum | exon |
| BlTCONS00061679-exon-Sc0000048-1564993656:615677..616210 | BlTCONS00061679-exon-Sc0000048-1564993656:615677..616210 | Branchiostoma lanceolatum | exon |
| BlTCONS00061679-exon-Sc0000048-1564993656:612804..612987 | BlTCONS00061679-exon-Sc0000048-1564993656:612804..612987 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000048 | genome | Sc0000048:612804..619829 - |
Properties
| Property Name | Value |
|---|
| GeneID | BlCUFF030454 |
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