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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000048:423753..429515- Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00061657 ID=BlTCONS00061657|Name=BlTCONS00061657|organism=Branchiostoma lanceolatum|type=mRNA|length=5763bp|location=Sequence derived from alignment at Sc0000048:423753..429515- (Branchiostoma lanceolatum)
ATTCCGGCCCGGCTGGATGTGAGATTGATTGGTAAATGTTCAGGTATAAC
AAATTATGATTCATAGAATGCCAAAGATTCAACCATATGCTGTGAATCAG
TGCTAATAATTATCATAACTTTGGCTTGTCAGTAATATTTCTGTCAAAAT
TGTTTGCACGAGAGTTTACTTTGGGAACTTTTAACACGAGACTTCACGAG
ACTTCATTATCCAAGATGGCTGCCTGTATGTTGGAGTCCTCCGAATCTCT
CCCAGATTTTGTCTTTCTTATTGAAGAATGACCTGTTTAGAAGGGAGGAT
TTTTAGATAATCACTTACTTCGCACAGTGAAGATGGACGGTTTCAGTCAG
TGGCAGGCGGGCTTCAGTGGAGGACCACCAAACTTGCGTCCGCGCCCCCC
TCCCCCTTCCCATGGCTCACAGTTTTCGTTTCACCCAAATCAAAGCTCTG
GGCTGCCCAGACAAACCGGAATAAACACTGGACAACAGCAAAATCAGAAC
AACGATGGACAACAGTTCTATTCAAATGCCGTGGGTGGGGCACAGACACC
AGGACAACAACAACAACATGGGTATGCCAACATGGGACAACAGCAACAGC
AGCAGCATTTTGGTTTTCCCTTTCATCATCAGGGCTCTATGGATAGCTTT
GTTACTCCACCTTTATCTTCCCATCAGCAGCAGTACGATCACTCTCTAGG
TTTTCCTTTAGGACCGCCAAAGTTTGAGCCAAACCATCAGGACATGAGAC
AACATCCTGACCATGCAAGAGAAGGACATTTTATCAACAGCATGCAGGCA
CAACAGCCCAATATGGCACAAAGTGGAACAGCTTTTCAACAGAACTTTTC
TTCTCCTCCTTTTCCCATAAATACACCATCAGAAATGTTCAATGCCAGTG
GAGGCACTTCCGGTAGCAGTTTGGACAACACGGGTAGAGGTTTTGTCAGC
AACCAAATGTCCACACCAGCATTTCCTCCACCAATCAGTCGAGACCAAGA
ATTTCCAACTCCGAAACACGGGTTGCCAAACATTCCCCCTCCGCCGTTGT
TTCCGCAGATTCCTAATATCACAGGGCATCTTCCATTTACATCAAATGTC
ATGCAAACAACGTCATCAACACTGGGACCACCGCTCCACCAGACACCTCT
CAGTCACAGCACATGCCCCTCAGACAAGCAGATACAGGCTGATGCAGATA
AAGAGTGGCTGTCTACTTGGCTAAAGAACAGAGGACTGGGGAAAGGGAGA
AGGAAAGAAAATGATAAAGGTCCCGCTTTGACAGTAAGTTACAAAAATTA
TATCAAGTACTAAATCCATTCTCAAGATCGACTTTCCAGATGATGAATTA
TTGTATCACTTGTGTTCACTATGGTGTCCATGGAAGGACTTTAACTGTGA
CATATTTTACTTGTACATTGAATATCATGATCATCAAACTGTTGTTTTCT
GTTAGTTCACTGCAGGTTGCTAAAAGTTAAAAAATTTCCACTCTGTCTTC
CTTTGTCTGTTTTACATAACTGACTTATGAACAGTACAGTAGGTACAAGT
TGCTTAAGACCAAGAAGAAGGCATCCACAAAGACGTTCCTAACCAAAGCT
AGGTTAAATGATGAGGAAATAGATGTAATGTGCCTTTCCAAAGGGCACAA
AAGTTGGGCCTGCTAGCTATAGGTAGTTGACCCAGAACCTTTAGATTCTA
AGTCAAAAGCCCTAACCACAGGACTTATTTGCCACCAACCTGTCTGTGCA
GGTCCCAGAGGTGAGACAGAAGCTGGCTGAGTGGAGATCTCTCCTGGACC
AGCTGACAGAACAGAAAGCCGTGCTGACTGAGGCTGTGGGGACAGACCAT
TCCACGTGGCAGGCTGAGATGATGAGAGCTGCAGAAATCAAAGTATTGTA
CCAGTAGAATTCATCTATTTTTGTGGGGAATTCGTGGTAGAAGAGGAAAC
AAGGTTTTTGCACTGTTACGAATCCGTGGTTGATACAGTTCTGTCATACA
AGTACAGTAGTAATACATGGGAAACACATATTTCTGTTGTCATGTATTTT
TGGTGAAGAAAGCACAGTGAAAATTAAGCCACTGTAAACATTTCACGATT
TTAAGTTTGTTATCATGTCCTGTCATCATCATCATTGGTCGTAGTAGTCA
TAGGGAACAGGTTAACTTTCCATGTACATATTGATGTTCTCTTGTCCTCT
TATTGTAAACCCCTCTAAAAAGAAATGAGAACTATCCAATAAAAAGATAA
GAAGGGATTCAAATGTTTTCCTCCGTGTACTGATACCATATCACCTTGCC
TTTTATCTAGGAAAGGGTAACTAAAGTGGAGAGCCTGTTTGGGGATGAGC
AGTTGCTGACACAATTGGAAAGAAAACTTAGAAGGATCCAGAAAAAGAGG
GTAAGTTAAAAAGATACAATAGTAAAAGTTGATAATCAATTATCAGACAG
TATTTATGAAACAACTGGTATTTAGGCGGTATGTAATGAACAACAAGTCT
AATGTCCATGGGGCTTCATTTCTTATTGGTGCCCAGTACAACAAGGTATC
CTTTTTAGTGTGTTACTTGTACTGTGCAGAAAAGTACTTCTTGCAGTGCT
TAAGTTCCTGCTGTTCATTTCTAAGCATACTTATAATCCTATATAAAACA
GGCCAGGATGAGAAGATTACGTGAGGAAGCCTACAGGAGAAGACAGGAAG
ATGAGCAGCAATGTCAGGACAAACATCAGAAAATTGACAAATGGAGAAAC
AACATCCTTCAGAAGGACCTGGATGCTAAGAGGGTGGGTACAACAAAAAC
CCTGAAAATGAACATCACAGTGTACTGGTACACAGTACTATTTTCGTGAC
ATACTCAAATATGTAGCCTTGGTGTTGAACTGAAGAATGTACCATGATGA
CAAATCGTTGTAAAGGACACTAGACAAGCATTCTCTAATGACATGTAACT
CAATGCAATTGATTTACAAAGATATGATCAACTTAATAACCATGACAAAA
CTAAAGAAATATTTATCTGTGCGTCAAGAGGTAGAAAGTAAGTAGAAACT
AGTTAAATGTACGTGTGTGTTTTCTACTTTACTTAGGAGGCGGAGCTTAA
GAAGGAAGTTGACGATACTCTGTCAGAAGTTCGTAGGAAGCAGTCAGAGG
CGGCGAAATCGATGGAGCTGTTGAGGTCTTTGGGCAAGCTGAGAAAACTG
AGGAAGGAAGCCAACGAGAGGAAAGGTATTGTTTAAGAACTGGACCATTT
CTGCTTCAGTTCTGTCCTGTTTCAGTGGCTTTCCCAAGTAGTATAATGGG
CTTTTGATGAGCTTAATACTTGATTGTGGTAGCTCCAGAATGAATGAGCT
TTATAGACTTGGGGGTGTGAAACTTTAAGTAGTAGTGGTTATGTGGTTTA
CAGTTGGTTCATAACAATCATTTTAAGTTTGTATGAGTTCTTATATGATT
GTCGTTTGTGTCTAATTATGAAGACTGTTATAGCCAGTAAATCTAGAATT
TCTATAATTACCGAGAAAGAAAATCTGGGTCCTTTTCTACTAGAGGAAGT
CTTCAGTAACAGTCTTTGCATTGTGTGGTCTTTGGGGAGGGCTGTTGGCA
TAGATGTTACACAACTATAAAGGTTTTGAGCAACTCTATTGTTTCACTTC
TTTTTCCAGGCGTGAAGACATCATCAGTTGGCATAGATGTTACACAACTA
TAAAGGTTCTGAGCAACTCTATTGTTTCACTTCTTTTTCCAGGCGTGAAG
ACATCATCAGAGACAGAGCGATTGTTTGAGCGTAAGTTAGAAGACTATGT
GGAGATGATGGCTGATCGTAGCAAGATGTATGCAGAGGAGGAGAGGATGC
TGAGGACAGTGGTGGAGGAGGAGCAGGAGGAGGAGAGGGAGAGATACAGA
CAGGTGAGTCAACCTAGCACAGGTGTGTTAGAGGAGGGGGAGAGGTACAG
ACAGGTGAGTGAACTGAAGAAAGGAGTCTGCAAGTGAGGTGAGGTGTGGA
ATCGGGAACAGGTGTGTCCATAATAAGGTATGCAGCAGGTAAAAGCACTG
AGATTGGTATGAAAATGTAACAACAATTCTATGGTTTGTATGGCAGACAA
TGTTAAAATGTACCACATGTAGCAGTAACTAAATAGAGAATACAACACGG
TGGAGCCTTCAGCCTTTTTTTGTCATTCCTGTCTGAGGAAATACACATTT
CAATGGGAAATGGACCAGGAGTTTAGAAAATGTGGTGTCCAGGTATAAAG
ATTTGTAACAACTCAATTCCAATATCCGCACACTTGCAATCAATCTGACG
TTAGGGCTCAACAATATTATGCAATGCACGCAAAGAGCTATTAAATTATT
CTATGTAGTCCCTTGTGATACAAGTAGAAGCATGTGTGATACTTTAAAAT
ACAGACCAGTGTGTAACACCCATGTCGAATGTTATCATTGCTCAGGTATG
ACATAAATGTAAAGTATGACACATACTCAGTAACTACTGTCTTTATTCAA
ACGTACAGGCCAGGAAAAAGAAGGAGGAGAGAGAAGCCAGGAAGAAAGAA
GCAAGACAACTGGAGATGCTGTTTGGACCTACAGGTTATTATTTTTAGGC
AATTTCATTTGTCAAAATTTTGAAGAAAAAGGGAATCATTATACAAAGGC
ATGATGTGTTGATGTTATTCCAATATTGTTTATATTCTTATCAATTTTTT
ACATATCCCCAGATCCCCTGGACACATGTGACCCCCTGCTACCCTACAGA
CAGTACTATGAGCAGGGAGACAACAGTGTACAATCCCTCATACATATCAG
GTGTGTAGAAATCTTCCAGTTCTCTAGGCATGTTAACATTGTTTCTGACC
CTTTTAAACAAGTACTACTACTAGACACTGTTCTTTTTGCACACATACAT
AAATGAGTGTATTTCTTGTGTTTGCTTTTTTTTTCGTTTGGTACAATTAC
GTATCACAAATTGTGGAAAAAAGGACAAACTTCAGGACAAGAAGCAAAAA
ATGTATCTATCTTCATAGGACTCTAGAGAATGTTCCGTCCACAAAGTATT
GTGTTATCTTTGTTACAGGAGAGAGTGGGATATGTATCTTGTCCCAGATG
GCACAGTGGGAGCCACAACTGTACCTGCTGCTTGGGTTGTACCATCCGAA
CCTTCCAGCGAGGTGTGGGCAGGGTGGCTCAGGGAAAATGCTGAGTGATG
GGTCTAAGGATGGCCCTGACAAGTCATAATGGACTACAATTCAAAACAGC
TTTCAGACATTCTAACCCGCTTACCTAAGGGATTTTTTCAAACAAGTACA
CAAAGAAACTGTATTATTTATGACCTCCAGTTTAATTCTTATGGGTTCAG
CTGAAGGGACTACCTATGTAATGCATTTGTTTGTATTTATAATTGTAGAA
GACCTTACAAAAGTTGCTTTGCATTTGTCAATTTCATGTTTCCAAGATTG
ATATATGAATGAATAAACCCTAAAGTCTACTTTTGATTTTGAGTAAATTT
AATAGTATGTTTTGACTAAGATAATGTGCATATAAGACATGGTGTCAGGG
ATTATATTAGTCATTTCATTGTTAATGTTATTTTCAGACATGTTTTTCTA
CCATGTTTTGTGCTGAAACACATTCCTTCTTGCAGGATAACAAAGCCTTT
GTCCTTTCCTTGACAAATTTAAGACCGGTGTTATACAGTCAAAGTTTGGA
TTATTTTCCAATTGTGTTAGAAGTTATAATTTATCTTTGTTTCAGTAAGA
AAGAAATTGTTTG Coding sequence (CDS) from alignment at Sc0000048:423753..429515- >BlTCONS00061657 ID=BlTCONS00061657|Name=BlTCONS00061657|organism=Branchiostoma lanceolatum|type=CDS|length=1497bp|location=Sequence derived from alignment at Sc0000048:423753..429515- (Branchiostoma lanceolatum)
ATGAGACAACATCCTGACCATGCAAGAGAAGGACATTTTATCAACAGCAT
GCAGGCACAACAGCCCAATATGGCACAAAGTGGAACAGCTTTTCAACAGA
ACTTTTCTTCTCCTCCTTTTCCCATAAATACACCATCAGAAATGTTCAAT
GCCAGTGGAGGCACTTCCGGTAGCAGTTTGGACAACACGGGTAGAGGTTT
TGTCAGCAACCAAATGTCCACACCAGCATTTCCTCCACCAATCAGTCGAG
ACCAAGAATTTCCAACTCCGAAACACGGGTTGCCAAACATTCCCCCTCCG
CCGTTGTTTCCGCAGATTCCTAATATCACAGGGCATCTTCCATTTACATC
AAATGTCATGCAAACAACGTCATCAACACTGGGACCACCGCTCCACCAGA
CACCTCTCAGTCACAGCACATGCCCCTCAGACAAGCAGATACAGGCTGAT
GCAGATAAAGAGTGGCTGTCTACTTGGCTAAAGAACAGAGGACTGGGGAA
AGGGAGAAGGAAAGAAAATGATAAAGGTCCCGCTTTGACAGTCCCAGAGG
TGAGACAGAAGCTGGCTGAGTGGAGATCTCTCCTGGACCAGCTGACAGAA
CAGAAAGCCGTGCTGACTGAGGCTGTGGGGACAGACCATTCCACGTGGCA
GGCTGAGATGATGAGAGCTGCAGAAATCAAAGAAAGGGTAACTAAAGTGG
AGAGCCTGTTTGGGGATGAGCAGTTGCTGACACAATTGGAAAGAAAACTT
AGAAGGATCCAGAAAAAGAGGGCCAGGATGAGAAGATTACGTGAGGAAGC
CTACAGGAGAAGACAGGAAGATGAGCAGCAATGTCAGGACAAACATCAGA
AAATTGACAAATGGAGAAACAACATCCTTCAGAAGGACCTGGATGCTAAG
AGGGAGGCGGAGCTTAAGAAGGAAGTTGACGATACTCTGTCAGAAGTTCG
TAGGAAGCAGTCAGAGGCGGCGAAATCGATGGAGCTGTTGAGGTCTTTGG
GCAAGCTGAGAAAACTGAGGAAGGAAGCCAACGAGAGGAAAGGCGTGAAG
ACATCATCAGAGACAGAGCGATTGTTTGAGCGTAAGTTAGAAGACTATGT
GGAGATGATGGCTGATCGTAGCAAGATGTATGCAGAGGAGGAGAGGATGC
TGAGGACAGTGGTGGAGGAGGAGCAGGAGGAGGAGAGGGAGAGATACAGA
CAGGCCAGGAAAAAGAAGGAGGAGAGAGAAGCCAGGAAGAAAGAAGCAAG
ACAACTGGAGATGCTGTTTGGACCTACAGATCCCCTGGACACATGTGACC
CCCTGCTACCCTACAGACAGTACTATGAGCAGGGAGACAACAGTGTACAA
TCCCTCATACATATCAGGAGAGAGTGGGATATGTATCTTGTCCCAGATGG
CACAGTGGGAGCCACAACTGTACCTGCTGCTTGGGTTGTACCATCCGAAC
CTTCCAGCGAGGTGTGGGCAGGGTGGCTCAGGGAAAATGCTGAGTGA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| BlTCONS00061657-exon-Sc0000048-1564993656:428945..429515 | BlTCONS00061657-exon-Sc0000048-1564993656:428945..429515 | Branchiostoma lanceolatum | exon |
| BlTCONS00061657-exon-Sc0000048-1564993656:428233..428835 | BlTCONS00061657-exon-Sc0000048-1564993656:428233..428835 | Branchiostoma lanceolatum | exon |
| BlTCONS00061657-exon-Sc0000048-1564993656:427624..427764 | BlTCONS00061657-exon-Sc0000048-1564993656:427624..427764 | Branchiostoma lanceolatum | exon |
| BlTCONS00061657-exon-Sc0000048-1564993656:427116..427205 | BlTCONS00061657-exon-Sc0000048-1564993656:427116..427205 | Branchiostoma lanceolatum | exon |
| BlTCONS00061657-exon-Sc0000048-1564993656:426733..426864 | BlTCONS00061657-exon-Sc0000048-1564993656:426733..426864 | Branchiostoma lanceolatum | exon |
| BlTCONS00061657-exon-Sc0000048-1564993656:426291..426429 | BlTCONS00061657-exon-Sc0000048-1564993656:426291..426429 | Branchiostoma lanceolatum | exon |
| BlTCONS00061657-exon-Sc0000048-1564993656:425613..425773 | BlTCONS00061657-exon-Sc0000048-1564993656:425613..425773 | Branchiostoma lanceolatum | exon |
| BlTCONS00061657-exon-Sc0000048-1564993656:424932..425007 | BlTCONS00061657-exon-Sc0000048-1564993656:424932..425007 | Branchiostoma lanceolatum | exon |
| BlTCONS00061657-exon-Sc0000048-1564993656:424716..424803 | BlTCONS00061657-exon-Sc0000048-1564993656:424716..424803 | Branchiostoma lanceolatum | exon |
| BlTCONS00061657-exon-Sc0000048-1564993656:423753..424447 | BlTCONS00061657-exon-Sc0000048-1564993656:423753..424447 | Branchiostoma lanceolatum | exon |
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000048 | genome | Sc0000048:423753..429515 - |
Properties
| Property Name | Value |
|---|
| GeneID | BlCUFF030435 |
|
