BlTCONS00061639 (mRNA) - B. lanceolatum

Overview
NameBlTCONS00061639
Unique NameBlTCONS00061639
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000048:219817..222032-

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>BlTCONS00061639 ID=BlTCONS00061639|Name=BlTCONS00061639|organism=Branchiostoma lanceolatum|type=mRNA|length=2216bp|location=Sequence derived from alignment at Sc0000048:219817..222032- (Branchiostoma lanceolatum)
GTGTGAGAAAGGCCGTGTACCTTGACATCATTGAGGTGTGCGTTGCGGGA GTCACCGGTTCCACTACGTGACTTGGAGCTATTGTTCCCGGGACAACATC GTCTGCCTACCAGCACGCCTATGTGCGCGGCGTGGTGACGTGTTGTCAGC CTGGTCCACAGTAACGCAAACTGTGGCGGCCAGACATCAGCGTCACCCCG GGGATGGGCAAACTCGGCCAGAAAATGGCGAGCGGAGGAGGCGGCGCCTG TGACATGACCACCGCGTCGGCGTCCTACGGGAGGACGTACAGCGAGCTGA AGCGCCAAGCGGAAAATGCCATGTCTAGAGAGAAGGACTCGTACGAAAAG AAGGTCGACTTCTACAGACGACAGCTCAAGAAGAAGATGAACCGAATTAG CGGCAGTCAGCGAGACCTCGAGAAATCTATGGTAGCCTACTCGCAGCGCA TGAAGGTTATCAATGACACGAGGTGGTCGGGAGAAAAGACGACACCAGGC GGAGAGAAGACGAGAAGACTCCGCTGGAGTTCCCTGCCACCAGGCGGGAA CGCCTCGTCGCGGCCCCTCGGACAGGTAGAAGTACCGGTGAGTTTGTTAT CAGGTACGGACAGTAGGGGGTCGTCTGTACGCGGTGGACCGGCGCGCCCG GTGGAAGGTGATAGGGGTTTCAGTGTTGTGAATACGTACGACTTGGTGGA CGGAAACACGTCCCTTTCTCATGGGCCATATAGTAGACTTCTCTCGTCGT CTCCTAAGAAAAGAACCGATGATTTCAGAAGGAAAGCACACGATACCGAG GACAAATCCTACTCGCCTTCGGGCAGAGAGACAGGGTCGTCACACAGAGG AAGGGACACCGTCCTCCCCGAACTGTTTGTACAGAAATGCGGTCGGGAAC CGAGCCGACACGACCCCGACACGAACCACAGTTCACAAAACGATACACAA AACTCAACATGTACAAAGGCGGAAGAGAAAGACGAGACTGACAGTTCGAC GGAAACGTCTAGTTCAGATTCAGGGGGAAGTGCGACAACAGGTGGGAAAC GCACAACACTCAAGACGCCTAGGGGTAAAAACAAGGGATCCAAATTATGG AGGCCACGAAAGGGGAAGAAAGTTCGGCAATCCATCGACAAAATGGACAC CATTGTAGAAGAGGACGGTGTTATGGAACCAAGGGCAAGCTTTAGAAGTA GGACTAATTCGAGGAAGTTCTTTTTCTACAAAGTAACTCCGCCACCAGAG AGTCAGCAAGGCGGCGGGCTTGAACACAAGCTAAGAGCTGTTGTAGTCGG GAGGAACTCAGATGTGTTGGAAGAAGAGAAACGTAAAAATAAAGCAGAAG AAAAGGAGGATCCCACAAAAAGGACTACCACGGTGATCTTTCCTCCGCTG GTTGGAGAAATGGAAGAACCCCTGTCATTCCAAGGAAAGGCCTTCTGGAG TCCGAACGATTCATTGGTGAGAAAAAAGCCCGCAGGACCGAGCGCGTTTT TACCTTTTCAAGCAGCTAAACAGTCAACTATTAGGCCCTCCAGAAGATCA AAATTGAAACCAGTAATATCAGAAGCTAGTTTATAAGTCTGCGATAAATG TGAAGTTATAGATGATTTATGACATATTTATATTCATTTTTGCAATATCA GAATTGTAATTAAGGATTACTAAAATATAACACTGTTATAATCTAATTAT TTATTCCACAAATGTCTGTTTTTGTAACAGTTTCTCACTTAGACCACAAC AGTTTTGGTGGCAATCTGAAATGATTTTGTTACAAATTAAACAATTTCCT CAAATTACATTTCAACTAAGTGCTTCTTGACTCTGAAGTTCACAAAAATA ATGGGAAAATCAAGGATAACAGACGCTAAAGGTATAAACTCCATTCTATT TGCTGTCCCACACAAAACATTTCTTTCCCTCGGGGTGAATACTGTGATAG GGCTACTTTTTTCTGATAACAGACAACCTTGTAGAGGTAATAGTCCAGAG ATGAGATAAAACCTATTGTTGATTATCAAGAGATTCATTAACTAACGTAT TTACACATTCCTATCTTCGCTTACTTTGACAAAGAAGATCAGATACACCA CAGTACGTGTTGATGCAAACTTTTGTTTGAAATCCTTCTAGTAAGGTCGT AATAATTAGAAAATGGCGTGCTCGGGCTAATTTACTAAAGATTGTGATAA AACAAACTCCAAGTCA

Coding sequence (CDS) from alignment at Sc0000048:219817..222032-

>BlTCONS00061639 ID=BlTCONS00061639|Name=BlTCONS00061639|organism=Branchiostoma lanceolatum|type=CDS|length=1383bp|location=Sequence derived from alignment at Sc0000048:219817..222032- (Branchiostoma lanceolatum)
ATGGGCAAACTCGGCCAGAAAATGGCGAGCGGAGGAGGCGGCGCCTGTGA
CATGACCACCGCGTCGGCGTCCTACGGGAGGACGTACAGCGAGCTGAAGC
GCCAAGCGGAAAATGCCATGTCTAGAGAGAAGGACTCGTACGAAAAGAAG
GTCGACTTCTACAGACGACAGCTCAAGAAGAAGATGAACCGAATTAGCGG
CAGTCAGCGAGACCTCGAGAAATCTATGGTAGCCTACTCGCAGCGCATGA
AGGTTATCAATGACACGAGGTGGTCGGGAGAAAAGACGACACCAGGCGGA
GAGAAGACGAGAAGACTCCGCTGGAGTTCCCTGCCACCAGGCGGGAACGC
CTCGTCGCGGCCCCTCGGACAGGTAGAAGTACCGGTGAGTTTGTTATCAG
GTACGGACAGTAGGGGGTCGTCTGTACGCGGTGGACCGGCGCGCCCGGTG
GAAGGTGATAGGGGTTTCAGTGTTGTGAATACGTACGACTTGGTGGACGG
AAACACGTCCCTTTCTCATGGGCCATATAGTAGACTTCTCTCGTCGTCTC
CTAAGAAAAGAACCGATGATTTCAGAAGGAAAGCACACGATACCGAGGAC
AAATCCTACTCGCCTTCGGGCAGAGAGACAGGGTCGTCACACAGAGGAAG
GGACACCGTCCTCCCCGAACTGTTTGTACAGAAATGCGGTCGGGAACCGA
GCCGACACGACCCCGACACGAACCACAGTTCACAAAACGATACACAAAAC
TCAACATGTACAAAGGCGGAAGAGAAAGACGAGACTGACAGTTCGACGGA
AACGTCTAGTTCAGATTCAGGGGGAAGTGCGACAACAGGTGGGAAACGCA
CAACACTCAAGACGCCTAGGGGTAAAAACAAGGGATCCAAATTATGGAGG
CCACGAAAGGGGAAGAAAGTTCGGCAATCCATCGACAAAATGGACACCAT
TGTAGAAGAGGACGGTGTTATGGAACCAAGGGCAAGCTTTAGAAGTAGGA
CTAATTCGAGGAAGTTCTTTTTCTACAAAGTAACTCCGCCACCAGAGAGT
CAGCAAGGCGGCGGGCTTGAACACAAGCTAAGAGCTGTTGTAGTCGGGAG
GAACTCAGATGTGTTGGAAGAAGAGAAACGTAAAAATAAAGCAGAAGAAA
AGGAGGATCCCACAAAAAGGACTACCACGGTGATCTTTCCTCCGCTGGTT
GGAGAAATGGAAGAACCCCTGTCATTCCAAGGAAAGGCCTTCTGGAGTCC
GAACGATTCATTGGTGAGAAAAAAGCCCGCAGGACCGAGCGCGTTTTTAC
CTTTTCAAGCAGCTAAACAGTCAACTATTAGGCCCTCCAGAAGATCAAAA
TTGAAACCAGTAATATCAGAAGCTAGTTTATAA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00061639-exon-Sc0000048-1564993656:219817..222032BlTCONS00061639-exon-Sc0000048-1564993656:219817..222032Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00061639BlTCONS00061639-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000048genomeSc0000048:219817..222032 -
Properties
Property NameValue
GeneIDBlCUFF030423