BlTCONS00061422 (mRNA) - B. lanceolatum

Overview
NameBlTCONS00061422
Unique NameBlTCONS00061422
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000048:596828..598329+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>BlTCONS00061422 ID=BlTCONS00061422|Name=BlTCONS00061422|organism=Branchiostoma lanceolatum|type=mRNA|length=1502bp|location=Sequence derived from alignment at Sc0000048:596828..598329+ (Branchiostoma lanceolatum)
ATCCTCGCCGCCGCTATGTGCCTCTGCATTGTTCGTATCAACTTCACAAT CCGGAGCTCCCCTGCACGGGTCTGGGAGAACAATATGCTTCCTACCTCTG AAAGAGAGAGCGCTACATTCAAGTGGACTCCATGCGGCCATATTGCTTTC CTTTAACTGTTTGTTTCTTCAATCTGTTTGTGTTAATTGGACCTCCCAAC CCGCCACCTTAACCGCCGAGTTGCGTACGTTCGTACGCGCGCTGTCGAAG TTGAGAGTTCACAATGTCGGGCGGTTCAATGGTAGGTTTTATCCAGGTTC GCAGGCGTGGGGAACTCAAGTTTACCATACTGTACATACATAGTAGTCAG CCATGTCTGCGGGCAAACCACACTGGATGAAAACACCCTATTTTCTCCAC CAAGGTAACTCCACCTCCTTTTTGGGCCAATTTGTAGCATTTTCCATTTC TGGAGGGGGACAAATTGAGATAGGCGGTCATTGCGTTCGCGAGAGAAGCA CATTAAATTCAAATTGAGAGAGGAGAATGGGCGAAAAGTGCAGGAATATT CTCAGAGGCGAGTCACTTAAATTGCTATAATATGCAATCGTGTCCCCTGA CTGTAATGGCCACAATTTTACCAGCAAGCTTTTATTTCTGTGAAATTTCT GGTTTTAGAATTTCTATTCTACGTGCGTACATGGCGTTCGTCTTTGTGTC ACACATGCATGGTAGCAGAAGGTGGGAACATTGTGGTAGGATTTGTAAAG GAATAAACAAGCGAGGAAAATGGAAACGTTGCGCTTCCTTGTTTGTTTCA ATGCTACATCGATGTGACTTACCACAACATTATCATTCACCCACTGGTCA TTGTATGGCGTACAAAGCTCAAGGAAAACTGGGCGGTTAAAAGTCTGAGC TAAGGTTTAAATTCCAACGGTAGGACCGGGTGATTTTGTTGAACAATCTA AAAGCACTTCCGATACAAGGCTGAGTTGTCAGGTCGTGCGGCAGGGCCTA CTCTAGTTGAGTGAAGACTGACATTTCTGACAAAGACTACGGCACTTCCC CCACGCCAAGACCTGTTCTGATGGAGTCCGAGTAAACTCTGCTGAAAAAC AAAGTGTCAGGGCGCTGTTACGCTACAAGGGCTCCTAGCACCGTATCGCT TCCGAGTAACGGGCGGCGGTGACAGAGGCTGTTTTGCCCGTGCCTGTGGC TCAGACACTGCGCTGGGTTAGTGTTTGGTACAGAGAACGAAACGGCGGCG CCAAGGCCCTGTAGCATCTGGCGATATTTGAACATCCGTGAAACAAGCCT AGCCGCAGAGGAAAAGTGTGGTTGATGGGGAGATGTGGCGATTACCTATT AATTCGAGTTTTACACGTCCGTCTACACGGCTGTGTGGCCAGGCCGGGGG ATGAAAGAGACAGATAGGCGTGTGATCTCACTAACACCATCGATCTGAAG CTATCGGACCCAGCCTTAGGGTGAAGATAGCGCAGAAACAAACCAGCCGG GC

Coding sequence (CDS) from alignment at Sc0000048:596828..598329+

>BlTCONS00061422 ID=BlTCONS00061422|Name=BlTCONS00061422|organism=Branchiostoma lanceolatum|type=CDS|length=342bp|location=Sequence derived from alignment at Sc0000048:596828..598329+ (Branchiostoma lanceolatum)
TCCTCGCCGCCGCTATGTGCCTCTGCATTGTTCGTATCAACTTCACAATC
CGGAGCTCCCCTGCACGGGTCTGGGAGAACAATATGCTTCCTACCTCTGA
AAGAGAGAGCGCTACATTCAAGTGGACTCCATGCGGCCATATTGCTTTCC
TTTAACTGTTTGTTTCTTCAATCTGTTTGTGTTAATTGGACCTCCCAACC
CGCCACCTTAACCGCCGAGTTGCGTACGTTCGTACGCGCGCTGTCGAAGT
TGAGAGTTCACAATGTCGGGCGGTTCAATGGTAGGTTTTATCCAGGTTCG
CAGGCGTGGGGAACTCAAGTTTACCATACTGTACATACATAG
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00061422-exon-Sc0000048-1564993656:596828..598329BlTCONS00061422-exon-Sc0000048-1564993656:596828..598329Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00061422BlTCONS00061422-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000048genomeSc0000048:596828..598329 +
Properties
Property NameValue
GeneIDBlCUFF030346