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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000047:1199005..1206634- Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00061154 ID=BlTCONS00061154|Name=BlTCONS00061154|organism=Branchiostoma lanceolatum|type=mRNA|length=7630bp|location=Sequence derived from alignment at Sc0000047:1199005..1206634- (Branchiostoma lanceolatum)
ATTTAAAAGAAGAAAGTATTTATAACGTTATTTGCTTTTATCAACTTTGT
GAGCTGTAAAACTTCCTATCACGTTTTTATTCTCCCCCTTTAACCTAATG
GAATACATAACAGTTTAAACATGGCTGCCATGCAGACGAAAAACATGTTG
GGACACAAGAAAGAAACGTTTGTAAACGTTTCGTACGGCTCAGAGGAGGA
TTCTGGCAGTGATGCTGACGCAAGTAGTAACGAGGATGACGATGGTACTG
TTTGTGGAATTAGCAATGTTTTCTACGTTACTCTGACTGTGTGTTACTCG
TTGAATGATCCGGTTAGTAGCGCCCCCCTCCCCACGCACGTGAACGCAAA
ACCATTTTCCCCACAGCTTTCCTCGGTACCGCTAGAATCTGTCCACCTCA
CGGCGAGGTCAGTAATCAAAATATCAGATATTATCAGGCCATGGATACGT
GCAAGACGAGATGAGGGGATTTAAGTGCTAGTTTAAGACATTAAGACGGT
GAAAAGGCCGTCTTCCCAACAGCAAAATGACTATAACTTATAGTATAACT
TTTTGATAGTACATGTTCTTTGTACAGGAAGGTACCACCAACATATGGTG
ATGATGTACAGGGCTTCTAAAATCTACTTAAATATGCCCAAATCCATCCT
TATCCCATTATCATAATCAATGATAGACCATACTGAAGGTCAAATTGCGG
GGTATTCTTCAGTAATTATTACAGTGCAATCATCTCTGTTTAGTCTGCAG
ATTTTGTCTTCTATTTTCAGCTCTATGAAAATTATCTATCTTAATACCTG
TTATTGGCCTTGATATTGACAGATACAAGCAGCCTCTGTATCTGTATCTA
TATAGCCGGTATAACTGCCTGTCGGCGTAACACACCAGCTGTAGCCTACT
AGAGTAGAGTAGAGTAGAGTAGAGTAGATTCTTTCAGCCAGGTAGGAAGG
TCATCTTCCAATTTAGGCCGCTCTTCCCTTTTCTGGATCTAGTATCAGAT
CAGGTAGCAACCTCTTCTGTGAGTTGGCAGATCACAAAACTATTGTAACT
TTTAAAGCCAAATGAAGTGTTATAGTTCACCGAACACATGCGATCCATTC
TGAACAGAGTTACTTTTTACATTAGATAAAAGAGTCTGACTATGCTCTAC
TTGTTGATTTGCCAGCAGAGATCAGTGACCATGATGATGATGGTGAGGAC
AGTCCCACACAGCCGACAGACCCTACAGCCGGGAACGCAGGCTGGGCTGA
TGCCATGGCCAAGATTCTTGGCAAGCAGGTGGCAAGCAACAAGCAGGCAC
CAATCTTGGTCAAGAACAAAGACTTCGAGAAAAGGAAAGAAAAAGAAAGG
GAAGAGAAAAAAGAACAGACAAAAAAGGTACTTCTATTTCCTATACCTTT
TCAAATTGCAACAATATTGGTTGCTTCTCAATTCATACTAGTATGAATGT
GAAAATGAAGTATTTGACAATACTCAAATAGTTATTTGGCAATACTCACA
TAGTTATTATCAAAAAGGTAATTGCTGATCACCTAATGTCCATGCCAAGC
AATGTGATATTAAAGTTGCCTCTCATAATCACTAACTGAAGAATATAACA
ATTCAGATACTGAGAAATATGCTGTTAAAGTGGCACTGTCTAGATATAGG
AACACTTTCTGTGCAGTGCAGTGCAGTGATGATGCCATTTTGATTTTGTT
TTAGGCTGGAGTAAAGAGACAATGGGAAGAGCTGGGCAGAGTGAAACCTG
ATGTTACAGAGAAGGAAAGGGAAAGGGCCCTGCAAAGAATAGCAACAAGG
TGAGACATATGTGTTTAACACTGTCAATCTGAGGGTTTGTCATGTTTGGA
ATGGTTGATAAAGACTTAGAGTTTAGCAGTGCTACAATAACTTATTGATT
GTTTATTTACCACATATCAAAGATGCAAGTGAAAACAATAATAAAATCAT
AATATAAATGTGCAAGGGAGGCCAAAAGCTTGCAAGCTTATATGCTGGCC
ACCCAGGTGACTATGATTATAGCATAAATGAAATTAACAAAATTAAGTAT
TGAATATTGAATAATCAAAATATCAATTCAAAGAATGAAACTAAACATAA
GTGAAACTAAACATAGACATAAAGACTAACACAAAAGTTAACAACTAATA
ATACAAAATGAGAGGACACTACAGAATAAGCACTCAGTTTTCTAGACCTA
TCAGGATCACTCAGGATCATGTTGTAGCCTACCGGTACTTTTATCATTAC
AAGATAAAAATGATGCAATCAACAGATCCCTCAAGCATTTTAAGATTATT
TCAAGGCACTATTTTTTCTTTCATGTAACTGTGACCTCATGTTTTAAGGA
AACACCTTGGCTTGATCAGAATCCTGCACTTGATTGTCTCCAGGATCCCC
TTTGATCCGTGAGGTTCATGTTGTTTTATCCCCATTTCCTGCAGAGGTGT
TGTGCAGCTGTTCAACGCTGTTAAGAAGGAACAGAAGACCATCCAGGAAA
AACTGCAGGAGGCTGGGCCAACGGAAAGTAAGAAAGCCAAGGCGATGTCG
TCAATCAGCAAAGGCTCGTTTCTGGACAAACTCAAGACAACAATGGCATC
AGGTGTGCCCAGTGGGACAGAGAGAAGAAAGGATAACCCACTTGATAAGG
TAAGCGTACACTGGCGTGATGGAACCTGTANTGATAAGGTAAGCATACAC
TGGCGTGATGGAACCTGTAGGATTTTAATAACTCCTGACTTTATCAAAAA
CGCACACATGATAAAATTAGTAGTTTATGATAATTTTGTAGAACTCTTTG
TCCACAAGTTCAGCCATCAGTGGTTACTGCACCCAGCTCTTGTTTAATGT
ATTGTCACCTATCCATTTGTTAATTCAGGCATTGTTAGACTTTTTTTCAA
ACATCTTGTTGTATATGTTTACCAATTTGTTGTATATGTTTACCAAGCCT
TTTTCCCTGATTGCTGCCTTGACAGTTTGAGCCTGTACAGGAAAGAAGAT
AACCACATTTAGGCAATCCTGACATTGATGTAGTCCGTCTGTTGCTAATT
TGTCATTAGGGCTTGATAAACATTTGCTTTACACCTGGCTGGTGTAATGA
CTTGTTCACAAGGAGGGCTACAATTTTCTGAATGTGTTTAGTCTATAAAT
TGCATCAGTGGTCAATTGGTACAATGTGTTGTCTTAACAGGTGCAGCACA
GGTGGTCTTTATGTCTGTAACATAACAATCACTGTTCTGGGTGGCAGGAA
GTGGGCCTTAACTAATCTCCAAGCAGATGTTGATGTAAAAAATTGTTATG
TTTTCTGCTTCTCTGCAGTTATGATCTTCTATACCAAAATCTGCTCAAAG
ATTAGGCCTTTGTTTGTATTGCATTCACGGTTAACTGTCTTCTGAACAGA
TTTATTTCATTCTCTCACACCGGTAAGGACTCCTACTCTTTTTTGATAAG
TGTGGTGGAATTTTTTGTGCGCTCGAGATGTGGCTCTCCTCAAACACGGG
ACCTCCATTTAACGTCCTATCTGAGGGATGTCCCTAACCAAAGCCAGGTA
CTCACACCTGAGTGAAGTGCAGATATTCGAGTAAAGTGCCTTTCCAAAGT
ACATAACGTTAGTTGGGCATGTCTGGGGATTCGAACCCAGGATCTCTTGG
TTCTGGGCCAAACACTCTGCCATTACACCATGTGACACCACAGGCCTAAA
CATCACCATGTTTTTTTCAGGGGAAGGCGGTGGACAAAGATGAGCCATCC
TGGAAGATTTTGCGAGATGATTATATGATGGGTTCCAACATGAAGGACTG
GGACAAGGAAAGTGATGAAGAAGAGGAGGAGAGGAGTGGAGATGATGAGG
ACTTATCTAGTGGGTCTGAGGACTGAGTCATGAAATGTTAACCTTCCAAA
TATGGGCGAATTGTGCAGTTTGTATGGACCACTTTCGACTGTGACACAGT
GGTGTAATATACTTGTATGATATACCAATTGAAGGTATAAAACCTAGACT
GTATATACAACAGTGTCCAAAAAACCTAATCACAGTATCACACACCCTTT
GCAAATGATAAACAAAATGTCTTATTTTTGTACAACTTTTCTGTGTAACA
ATCATAACTTCTTCGAAGTTCTATAATCTCAAACACATTTCTTAATCAAT
TGATGGGTAAGCCTACATAATACTATGCATTGTTAGAATAGGTAGAATAG
CTAGAATAGGTAGAATACATAGAAGAGGGTCTGCATGGGGGGTTCCTGGC
AACGCTTAACGGTAAATTCAGGCCAGCCGATAACGCTTAACGGTAAATTC
AGGCCGGCCGATAACGCTTAACGGTAAATTCAGCATTCTTAGAACATGAG
ATACCCCTGAAGATGAAGGGGTTTTTTTTTGCCAGTACTCGTCCTGATCT
TGTGGCAAGAGACCTATTACGCTATGCCGCGATTCTCGCACGCCGTCTCC
GAACCCTTTAATTCGGCGGCGACAGGAAATTTCGTATTGTTGTGACGAAA
TGTTCATGATCACGATGACGAGCGCCGAAGGCGCGGCGAAAATTTTGAAA
TCTTGACCCTCTGAAACGCTATTTCCTGCATTCTGAGGGGGGGATTTTGC
TGAAGAGTAAGCTAAGTTTTATGACATCTCTATTTGAAAAAAAAAATACA
GAAGAGTTTCAGCTTGATTCTTGAGGGGCGTCACACCCTCCAGACTTCGC
CGGAGCTGCGACATGCTCCCGGGGAAAATTGACACCCTGAAACGCTATTT
CTTGCATTTCGATGGGCAAATGTTACTGGTTATGTAAGTTAAGTTAGATG
ATATCTCTGTGAAAAAATACAAACGAGTTTCGGCTTGGCTTTTGGGGGTC
GACGCCCTCCTGACAATATTTTTCGACGGAGGCCCGGGGAAAAATTTAAA
ATCTTGAACCGTGAAACGCTTCATTTCCTGAATTTTGAGGAGAAAACTTT
GCTGGTAGAGTGAAAAATAGAACTGTTTCAGCTTGAAATTTTTTGGGGGG
CTGGGGGCGCCCTACCGACATATTTTCGCCGGAGCCGTGAGCTCCCTGGA
GAAAATTTTGAAATCGTGACCCACTGAAATGCTTTTTCTTGCGTAACGAG
GAATTACTCAATAACGCTTAACGTTGAATTCAGGATGACAAATAACGCTT
AACGAGGAATTAAAACGACCAGTAACGCTTCACGATTAATATACTGATAA
CGCTTAACGGTAAATTCAGGGCGGCCGGTAACGATTAACGGTGAATTAAA
ATCGCTCGTAACGCTTCACGAAAAAGGGCATGCAGACCCTCATAGAACAG
TCACCAGGGTGTGTCAAACTTTGGTTCAGCTTCCATAACATAAGTGCCCT
GTCTATCAAAGTCAAGTTGAAGTGCTCCCCGGTGACAAATTGCTTCAGAA
CTTGACCCTTGCCCTGCCCTCCCATGTTGAGACCAGCCCAGACCACACAC
GGTCTGCGTGACCTACTCTGAGGAAGCAACAACCCCCTCCTGTTTTCCTC
TCCACTTCCTTTAAGGATAACCAAGGCTTGCTTGTGTTCCTGTAGTACAT
TTCCTTTTGATATGAACATGTCAATATTTCCACAACTACTGTGCATGTGG
TAAGTTCTTCCACTTAAGATTTGTGTAAAGCCTTTGTGTAGAGCCTTAGT
TTAGATAGAATTATGATAAGTTCAGTACATAACTAGGAATTGTGGAGATA
TTGCACTCTATTATACTGTATTTTATCATTCCACATGTCAAGTAGTCGGC
ACAGTTAGACTTTCTTAAGCTAACAAAACCTTATTGTTCAATCAGAGAAT
TCAAGCAGCTTATGTATTGTTGAAATGTAAATGGCGACTTAGAAGCTGCT
TCTCTAGGATGCATCTCAGAGATTATTGTCAAATATCAAGTGACTCATGA
CATAAATTACATCTTAAAATCTGTGTAACTGTTGTTTCTTTTTATTTATA
AACGATTTTTGTAATTGAACATCACACATGCTGCAGTTTTAAGTGAAGCA
ACCTAAAAATGACATGCAGAAATGATGTGGGATTTGGGCTCAAAGCTCAA
CTATATTTTGTGATGTGTGATTTTCAGGTATAAGGTAAACCTTGGCCACC
TGCATGTCACCATGAAATACAGCTTTATCTTCTGGTGCTAATTACATATG
CTCTCATTCCATCTATGTTACCTAGTCTTTAATCCCTGAAAAGACCCACC
TTCTGCTAATGACCTAACCAGGCTCTCCTGTGAGGCCACCTCTACAGGAA
CACACACAGAGTTCCTGTGTGGTACCACCACAAACGAACCATCTCTCCAT
CAAGGAAATGATTAGTCATTGCCTGCCAATCATTTTACCAACCCACCAAC
GGGGTTATTGTGAGGTCAATTTATATGATTACAGATAAAGCGGAATTAAG
TGTCAGCCACTTGGAAAGGGATCTATAGAGTACATACTCGGCATTCCTAA
AGATCCAGGTTGTTCAGGTAAACTGTGAACCTTTGTTTTCAGTACAGGAA
ATGCCATTGATGAATTCCTCTAGATAACGCAGTGTTCATTGAGAACAATG
GTTATTTGTTACATTAGATGTGGTTCCCACATCAGATGTACTCAGGGACT
GTTTGCAGTACTAAAACAATGGACATAGTTGAAATGTTGAGGTCTGTTGC
AAAAGAAAGAACATGATGGGCAGGGGTATGTAATTGTCAACAGAGTACAT
GTGTGTGGGCTTGCACTTTAAAATCACAATAGAAAAGATTATGATCTGTT
TTCAGACTGTTGTCTTGCTCTACCTTTTTAATTCTATAGCCTAAGACAGG
CAGTGCTGAAACAATGGAAAAAGTTGAGGTCTGTGGCAAAAGAAAACATG
ATAGGCAGGGGTATGAAGTTGTACATGTGTGCGGGCTTTAACTTTAAAAT
ACAAATCGATAAGATCACATCTGTTTTCAGACTGTTGTCTGGGTCTTGAA
CGTGTTCTCTTGCTCTTGAACTTCACTGTTGCCTTCCTCATTATGCCTAT
CTTGTCCCCCAACGACCAGGAGGTCTAGCGTAGGTCTTGCTCTAGCTTTT
AGATCGACATTGAGATGTTTCTTAGAACAACGTACAGACTTTTCTGTGCC
CGCTGTGTACCTGATGGATATGTGCCCCAAGGCTGACCCCTTGTCCATCA
TCCACCCACCTGTTCCTGGCAGGAAGTCTTAGCAACCGCGTCGTCATGGT
AACCGGTGTGCGGACGATGAAGCAGTCAGGGGGAGGGAGGCGCACGACAC
AGGGGCATGTGTTAATACATTTATGGTGCTGCAACACGCGAGGAAGTGCC
ATAATGCATCAGTGTGTTCACAAACAGCTGTAGGTTGTTGTTGAGATTGA
CTTTAACAAGGATGTCAATTTGGCGGGAAATAAGGTCATGTACGACTTTA
TCCAGGGTTGAGACGAGGCGTTGTTTAAAAGGTTGTTTGTGTCTGGTCCG
ATTGTTTTACGTGGACGTGGCCAGGCCGTTCGCGTTAGGGGTAGACTAGA
CCGCGGGGAGGTTGCTGCTGAGTCAAGACTGTTGTAAATATGCTTTTTGT
TAGAGATTTCAGCAGCACCTGCTTCTACCCTGAAGTCGTTACAGGAGTGA
GGAAAGAACGGTCACCTTCATGATCGGATA Coding sequence (CDS) from alignment at Sc0000047:1199005..1206634- >BlTCONS00061154 ID=BlTCONS00061154|Name=BlTCONS00061154|organism=Branchiostoma lanceolatum|type=CDS|length=792bp|location=Sequence derived from alignment at Sc0000047:1199005..1206634- (Branchiostoma lanceolatum)
ATGGCTGCCATGCAGACGAAAAACATGTTGGGACACAAGAAAGAAACGTT
TGTAAACGTTTCGTACGGCTCAGAGGAGGATTCTGGCAGTGATGCTGACG
CAAGTAGTAACGAGGATGACGATGCAGAGATCAGTGACCATGATGATGAT
GGTGAGGACAGTCCCACACAGCCGACAGACCCTACAGCCGGGAACGCAGG
CTGGGCTGATGCCATGGCCAAGATTCTTGGCAAGCAGGTGGCAAGCAACA
AGCAGGCACCAATCTTGGTCAAGAACAAAGACTTCGAGAAAAGGAAAGAA
AAAGAAAGGGAAGAGAAAAAAGAACAGACAAAAAAGGCTGGAGTAAAGAG
ACAATGGGAAGAGCTGGGCAGAGTGAAACCTGATGTTACAGAGAAGGAAA
GGGAAAGGGCCCTGCAAAGAATAGCAACAAGAGGTGTTGTGCAGCTGTTC
AACGCTGTTAAGAAGGAACAGAAGACCATCCAGGAAAAACTGCAGGAGGC
TGGGCCAACGGAAAGTAAGAAAGCCAAGGCGATGTCGTCAATCAGCAAAG
GCTCGTTTCTGGACAAACTCAAGACAACAATGGCATCAGGTGTGCCCAGT
GGGACAGAGAGAAGAAAGGATAACCCACTTGATAAGGGGAAGGCGGTGGA
CAAAGATGAGCCATCCTGGAAGATTTTGCGAGATGATTATATGATGGGTT
CCAACATGAAGGACTGGGACAAGGAAAGTGATGAAGAAGAGGAGGAGAGG
AGTGGAGATGATGAGGACTTATCTAGTGGGTCTGAGGACTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| BlTCONS00061154-exon-Sc0000047-1564993656:1206391..1206634 | BlTCONS00061154-exon-Sc0000047-1564993656:1206391..1206634 | Branchiostoma lanceolatum | exon |
| BlTCONS00061154-exon-Sc0000047-1564993656:1205258..1205469 | BlTCONS00061154-exon-Sc0000047-1564993656:1205258..1205469 | Branchiostoma lanceolatum | exon |
| BlTCONS00061154-exon-Sc0000047-1564993656:1204836..1204930 | BlTCONS00061154-exon-Sc0000047-1564993656:1204836..1204930 | Branchiostoma lanceolatum | exon |
| BlTCONS00061154-exon-Sc0000047-1564993656:1203986..1204190 | BlTCONS00061154-exon-Sc0000047-1564993656:1203986..1204190 | Branchiostoma lanceolatum | exon |
| BlTCONS00061154-exon-Sc0000047-1564993656:1202417..1202914 | BlTCONS00061154-exon-Sc0000047-1564993656:1202417..1202914 | Branchiostoma lanceolatum | exon |
| BlTCONS00061154-exon-Sc0000047-1564993656:1199973..1201336 | BlTCONS00061154-exon-Sc0000047-1564993656:1199973..1201336 | Branchiostoma lanceolatum | exon |
| BlTCONS00061154-exon-Sc0000047-1564993656:1199005..1199787 | BlTCONS00061154-exon-Sc0000047-1564993656:1199005..1199787 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000047 | genome | Sc0000047:1199005..1206634 - |
Properties
| Property Name | Value |
|---|
| GeneID | BlCUFF030238 |
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