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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000004:854850..859240+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00011532 ID=BlTCONS00011532|Name=BlTCONS00011532|organism=Branchiostoma lanceolatum|type=mRNA|length=4391bp|location=Sequence derived from alignment at Sc0000004:854850..859240+ (Branchiostoma lanceolatum)
TACACATCTGTTAGCCGCGTTGGACTTAGTTGGCGCATGCGCTCTAGGCG
CCAGAGAAAGGGTGGAGCCGTTGCCAGGCGACGACGGAAAACTATGACGC
GCCCATTGCGCAAGAAGAACCTTTGACCCTACCTTTGACCCTTAAGATCA
CATGGTTCGGAAGACGTCACGTGTCCCTGGTTTTGAAGATGGAGGCAAAA
TCGTCATATCTCTTCGTTCTACCGCGAAAATCCGGAATAAAAAGCGATTT
TTCTACGCAGACACGGCGATTCGACAAAATGAAGGTTCGACGCGTCCGCA
GGCATTCTATCGAACAGGTAAGTGACTGTCGATGCTTGTACATTATCTAA
AGTTTTCCGGTGGAATTTTTTTGTATTTTCTGTTAGGCCATGCGGTCGGT
CTATTATTTTTTCTGGTCGCATCTGTCGCAACTCTCTGTATCTGTAACTG
TAACCATTTTTCTTACGCACGGTTTGGCAGTTTTGAAGGCCATCTTGTGT
GTTTATTCATGTTTCTGTGGTGGGATTTTTCGTGTATTTCACGTTATCTT
AGTACGAAACGAAGTCGAGACGTTCCATGCAAAGTACTAGAGTAGAGTAG
AGTACTAAATACCCCTCCCCTTTCCTTGTCATAAATTATGCAACATTCAA
CTCACTTTGCTGGATATTCTATACTCTATCAACTACATGTAGCATTCGGA
ATCACCCATTGAGCTTTTCTCAGTTTCGAAGTAAACGAAATGATCCCCAG
AATTCATGTAGATAGTAGACATTCTGACCCTGATATGGTGTACAATTTAT
TCATAATTATTGTTTTCCTTTACAACACAACACAACACAACACAACACAA
CACAACACATACCTGGTCATAAAGCCATCTCTATCAAACTTAACATTTTA
GTAATGACCTGTCAACCTAAACATCTTTCATTGTTTTTATCATCTAATTA
TCTTATCAAAGGCCACAGTTCAAGGTCAAAGGTATATTTAACAGGAGAAT
CCCTACCATTTATATCAGAATTTTATTTTAGATCATAGTAGTGATCTTTA
TCACAAACTCAATGGATCTCTACAATATTGTCANCCTACCATTTATATCA
GAATTTTATTTTAGATCATAGTAGTGATCTTCATCACAAACTCAATGGAT
CTCTACAATATTGTCATATTTAATAGTAGTCATTCATACTGCTTGAAATA
GATTGATTACTAGTAAGCAGGTAGGAGTGCTTAGATTCATAATCATTAGA
CATTTCCAAAGGCCTCTGACAAGTGAGTGATATTCTAATCATGCATGACA
TTGTAGAGTCATGTTTTATTGTCATTATTATGTTGCTGAATTCCTGCTTC
AAACTCAAATTACCACATATCTGCCATACAAAATTGCAAGTTTGCAGACT
CTTTTNCAAAATTGCAATTTTGCAGACTCTTTTCAACTTCCGGCATCGAT
CCCCTAGGCAACAGGTCACTGGGCATCAAAACACAGTTCCAACAAAACAG
ACTCCTCTCTGCCAGTCTGTCTACACTTTCCTCTGGGTTGCTTCTGGCAA
CCCCCAAACTTATCAGGACTGACTTGCAAAAATTGGGCCTGGAGTGTGAA
ATTCAGCCATTGTACAGGGTTCCTGATGCTGGTCGTTCTGCGTTTGTAAT
ATGTTGTTGAACATGGCACGTGTCTATACTTGATGCCCTTTTCATCATGT
AGTCCTAACCCGAATTTCCACCTTCCCACTCAGGGCACAACATGCTCCTC
CAAGATGTGCATGTGGATGGGAAATCTTGCAGTTGGAAACATCTCCCGGA
ATTCTGAAGGATGCGAGGAAGGTCCTGATACTCTCATCTGGAGAACAGAG
GGAACATGATCTGTGTAAGTACATTGTACATTGTACAAGAACATTTTTAG
CTATCCTGATTAATTAGTGTTGGAAGCTTGCATAGCTTCCAAATGTAATC
CACCATTCTTCTTCAGCGCTGAGTCAAGTCATCTTGTGATCTGAGAGGTC
ATTGATTGATTAAATAAGCTTGTTGTATAAGCATGTTGGTACAATGCACA
TACATATTGCTTCTATGTCCATGCAGGAGAGCAAAGCTGACACCCTCCTA
TGGAAAGCACAGGTAATAACAACAAATGGACCTCTGGCCAGTTTGCCGGA
CAAAGTACTTCTGAAACACCATGTACGCAGACAAGCTTACCGCAGCCAGA
CATTTGTGGGACACCACATGAAGATCATGCTTCAGGTACTTCTTTATCAG
TGATAGCAAAACCTATTATAACTATTTTTCCAATTTCCAGGCATTTCTGG
AGTATTCTGAATTCAAACTGTNTTCTATGTCCACGCAGGAGAGCAAAGCT
GACACCCTCCTATGGAAAGCACAGGTCATAACAACAAATGGACCTCTGGC
CAGTTTGCTGGACAAAGTACTTCTGAAACACCATGTACGCAGACAAGCTT
ACCGCAGCCAGACATTTGTGGGACACCACATGAAGATCATGCTTCAGGTA
CTTCTTTATCAGTGATAGCAAAACCTATTATAACTATTTTTCCAATTTCC
AGCCATTTCTGGAGTATTCTGAATTCAAACTGTTTTCCTTTCAGGATGCT
GACAGCCTGCTTTCACTTAACACAGGTCCCAGAGATCCCAAACCTTAAAA
ACATTCTTAGAAATATACTTGAATAATACTTCCATTTCCTTCCTGCAGGT
GACTTGATGTCAGCGTTCATGTGTGTTGTCCCTGTTGCTAGGTTACCTGA
CTGTCCTTAGCTGCAAAACAGCAGATAATTGTTGTGTTTGCACTTGAATT
AGGTGATATTTTGTTGAGCACCTGTACCCCCAGCTTGAATCTATACTTCA
TCCGTAGGGATGTCCATGTCAGTTTCCTAATAAAGGATATACAAAATAAT
GGATATACAATTACATGGGAATCCTGTTAGTAGTTTATTGTAGTTAAATC
CATTACGCCCCTCCCTACAAGTGTAACAGTCCGCGCATGCGTACTGAGCC
TGATTTATCTGGTTTGAGGAGACCATGCCAAATAGATGTTTGTGAATGTA
CTTCTGTGTCTGTGTGCAATCATTCATCATCCTTGCATCCCGAGTGAGTC
AGGGGACCGATATCGGTTAACAAATCCCTGTTAGTTAATCTTGTTTCACT
GAGATGATATATTCATAAAGTAAATGAAGAGTCTTTTATAAGTTAAATAT
CTGCTCAGTTTGGTAGAGATGATCATTATGGTTTGGTAAAGAAAACATGA
GAATGGTTGTAGATGTTGTAATGATTTATGATATTGATTAGTTAACAAGA
ACAATAATTCTTACTGCCTATTTCTGCTTCTTGTCAGGTTATCCAACTCT
GCAGCGTCCAGTGGATGGGAGTGCGGGGAATGGCCTCAACTCAACACTGG
ACGACCCATCATGGCAGTCTGACGGTGAAATGTAGAAGGTCACACCTGAC
CTTCACATTGGACAGTGGGCCCTTTGCGACATAGCGGGACGTTTTCTCTG
ACTTCACTATGATGCCATACCTTTAAGCCACCTGTACACAGACGATGAAA
AAAAACCATAACAGTTTTTTATGCCTTTCTGTTGAAATGATTCAGCACTT
GATAAAAAGCAAAAATATCTACCATAGATAGATAAATGACATGTTTTGCT
GGGATGTGTTTATCAGGTATGGTGGTACATGTATGGTATTTCTGTCCAGT
ATGCTACATACCTCCTCAGCTGTCTGGTCTGACTCCAGTTGATCCCTATG
TCAGACTGGGCAGTGATGAGGAGATGGTCGTCTGGAATCCTGATTGTTGC
CAGCATGGTCTGCAGCTCTGCCCGGGGAATGATCCTGAGCTTGTTCTGTT
GTTAAGAGTGTTNGGAATCCTGATTGTTGCCATCATGGTCTGCAGTTCTG
CCCGGGGAATGATCCTGAGCTTGTTCTGTTGTTAAGAGTGTTAGTCCCCG
GGCCCTGCTCTTGCCACCTTACCTGAGCCCTGTAACTTTAATGAGCGCTT
CCGTGCTGTTGCAACCCACACCCCTGAAGCTGTCTTTCTGGCCTTGGTTA
TCTTGCACAGTGTGATTGGCTGGTTGAAATGAGAATATCAGTTTTATTGT
TAGATCATTTGATTTGAAATGATCGATGATCTTTGTTGAAGGAATCTCTC
AGGTGGGTAACAGCAAGCTGCCCAAGTTGAATAGTAACTTGTTATAGTTT
GCAAAGGATGTCAAAGCAAGTACAGCAAAGGACTGTGGTTATAGTACCAT
GATCTGTATGATCATGAAGAATTTCATGTATTTTTGAATTAAATTTCTTT
TGATGCATTAAGTTGACAATGTGTAATCTTCTATTAATAGATTATGTGTG
TTTGAAAAAAATAAAGTGGTGACTTACTTGTCTGCATGTAC Coding sequence (CDS) from alignment at Sc0000004:854850..859240+ >BlTCONS00011532 ID=BlTCONS00011532|Name=BlTCONS00011532|organism=Branchiostoma lanceolatum|type=CDS|length=315bp|location=Sequence derived from alignment at Sc0000004:854850..859240+ (Branchiostoma lanceolatum)
ATGATCTGTGAGAGCAAAGCTGACACCCTCCTATGGAAAGCACAGGTCAT
AACAACAAATGGACCTCTGGCCAGTTTGCTGGACAAAGTACTTCTGAAAC
ACCATGTACGCAGACAAGCTTACCGCAGCCAGACATTTGTGGGACACCAC
ATGAAGATCATGCTTCAGGTTATCCAACTCTGCAGCGTCCAGTGGATGGG
AGTGCGGGGAATGGCCTCAACTCAACACTGGACGACCCATCATGGCAGTC
TGACGGTGAAATGTAGAAGGTCACACCTGACCTTCACATTGGACAGTGGG
CCCTTTGCGACATAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| BlTCONS00011532-exon-Sc0000004-1564993656:854850..855166 | BlTCONS00011532-exon-Sc0000004-1564993656:854850..855166 | Branchiostoma lanceolatum | exon |
| BlTCONS00011532-exon-Sc0000004-1564993656:856583..856713 | BlTCONS00011532-exon-Sc0000004-1564993656:856583..856713 | Branchiostoma lanceolatum | exon |
| BlTCONS00011532-exon-Sc0000004-1564993656:857188..857346 | BlTCONS00011532-exon-Sc0000004-1564993656:857188..857346 | Branchiostoma lanceolatum | exon |
| BlTCONS00011532-exon-Sc0000004-1564993656:858187..859240 | BlTCONS00011532-exon-Sc0000004-1564993656:858187..859240 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000004 | genome | Sc0000004:854850..859240 + |
Properties
| Property Name | Value |
|---|
| GeneID | BlCUFF005765 |
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