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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000002:3570424..3576309- Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00007980 ID=BlTCONS00007980|Name=BlTCONS00007980|organism=Branchiostoma lanceolatum|type=mRNA|length=5886bp|location=Sequence derived from alignment at Sc0000002:3570424..3576309- (Branchiostoma lanceolatum)
GTCTGAGTACCGTATCGTGCCGGTAACTCAGCAAGGCCGCCGTGAACAAA
CTCAGCTGCAAGTCCGCCGCCAGCGAGTCCCCTTCCAGCTTCTCTCGTAC
ACTTGTCCCCACATCGTCTGCCATTTCTTACGTTCCTTTGTCAAACGCGT
TCTGTTCTTCTAAAATTCTTGACACATATGCTCACGGGTAGTAATTATAA
CGTTATATAACGGAAGTCCACGTAACGTTAACGAAGTTGCCACGAGTTCC
GAACATAAGATCCACCTCTTTTCGATAAAATCGTCAGAAAACAACGTCTA
CAAACAGTCTAACTTATTCCTGAGAATGTCTAGTACTTTTGCAAGCCGAG
GACATGACAGTTAAGTCGTCAGAGGTTTTCTAACAGGCAGAAATGCGTCC
AAACTGGACGGAAGCAAACTTTTCCGTGTCAACATCCGCCATTTTGTCTT
CTGCTGGTGCTACGTCATCTTTAACCAGGTCACGTATCATTAACCAAAAT
GATTCAAATCTTTTTATATCAAAGAACAAGTCGTGACAAGCAATTTTCTT
TTCGCAAATGACTCTATAGATACCTCTTAGTACACAGATTATGCAAAAAT
TACGTTATCTTTTAACTAACCTGGCAAAATTTACCTTTATAACTTAGAAA
TCTTGTTAACTTATTAACTTCTCCCGGCATGCAACAGCCAAAATGGAGGC
CCGCCATGCGCCGAATATTTTGATCACAGGTATTTGCGGGTAGTTTGACG
TATTGCAAGCTGTAACGAAGACTTTTTGATTCTTTATGGCAAGAATTGAA
GACTTAAGGTTGTAAAGAGAATGTGTTTTCCCACGAAAAGGGGTGGTATT
TTTTATGACGCTGATTGTTATGGTATGTATAGTGGGGGGAGGGGGGCCGG
TGGTACACACGTGTTGTTCCATTTTTGAGAGTAGAGCAGATCATTCAGCC
AGGAAGGAAGATCTCTTCCAGTTGAGGCCGCTCATCCAATTACTGAATTG
TCATTCCAGGCTTGAGGAAGGTTTCCACACCCAACTTTTGTCTGTGTATA
ACCCAGATCCAGTAAAAAGATATGGTCCGTTTAGAAACTTAAAGCTACGG
CCGCGTGGCGCGTTGGATACACCCGATCCCTCGATCTCGGAAGTTAAGCA
ACGCGCGGTCCGGACAGTGCTTGGATGGGAGACCAACCAAAGACGTCCGG
ATTGCTGTAGCCTCACGAAGCTTTCCACGAAATCGTCTTCCGGGAGGGAC
GTAAAACGGGGGTCCCGTGCTCGAGGAGGTGCCTCGAACACGTTAAACAG
CCTCATTACCCTACACATTGGGTACCTGCCTGTGGCACTGGCTGCAAATA
CACCTGATATTATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCTACGGCC
GCGTGGCGCGTTGGATACACCCGATCCCTCGATCTCGGAAGTTAAGCAAC
GCGCGGTCCGGACAGTGCTTGGATGGGAGACCAACCAAGGACGTCCGGAT
TGCTGTAGCCTCACGAAGCTTTCCACGAAATCGTCTTCCGGGAGGGACGT
AAAACGGGGGTCCCGTGCTCGAGGAGGTGCCTCGAACACGTTAAACAGCC
TCATTACCCTACACATTGGGTACCTGCCTGTGGCACTGGCTGCAAATACA
CCTGATATTATTATTATTATTATTAGTATTAACTGTAGCCCATATGTCAG
TTGTATTTGCTGTCTGGCACCAAAGCTACTTGCAACGTCAGATTTAAGAG
TTGTATGGCCTTGGGCCCATATCTGGGGCTTCATTCCAGAGGAGAGATTG
TTCGAAGGTCATTTACATTAACATCTTTATAATACTTGACTTTGTTGGGT
GCCTAGGTTCACAGCTAGCGCTTAGTGCAACCGGTAGAGGTGGTGATGCT
TAGAATAAAAGAAGTACATTGACAAAGCAAACCAAATTTATGCAGTCATA
TGTTAGGCCATGTTCATTTGATTATATGGATGACATCCTCTGGGGACCCA
AAAACTAATGCGAGCATGCGAATAAAAAAAAGGTTGGCCAACAAAAAAGT
TGCCTTCATTATGAAAATCTATGTGGTCAGGAAGGATGAACAAAACTAAA
CACACAGAGTATGGTATACCAAAACATAGATTCTTCATTTTTGTTCTTTC
AAAACCTCTTCTTTGACTTTGGAATTGACTTTGGCATTCTACGATATTAG
TATTCGTTTTCTGAAATATCTTCTGCAATTTGCAGCATGTTTTTTCTCAT
TTTGCAGCTGCTTTCTTTCTATGATTTACAGTATGTTTGAAAACTTCTTT
TTTATTTTGGGAAAATGGACGAAACTTGATGCGCGTGCGGATGTCATCTA
TATAATCAAATCAACATGGACTTACATACAATTAAGTATCATGATTTTGA
TACTGATATTTGTGCTTTTTCTTTGTCCCTAGGCACCCCAGGCACAGGGA
AGTCCATACTTGGCAAGGAGCTGGCTGTAAGGACAGGGCTGCAGTATGTC
AACATCGGAGACCTGGCCAAGGAAAACAACTTCTACGAGGACTGGGATGA
AGAGAGGGAGTGTCATGTCCTCGATGAGGACAGGGTAGGTTTCTTCAGGA
GATCTTCTAGTGCAGTCTGGTGTTGTGGTTGACCTCAATGCAGGGCTGTC
TCCAGCTATAAATTTTTTCATCAGATCCCACTCATTGATTGAGAGCCCAT
TTTGATACGTTTTTTATTAAATCTGTCTTTTTAAGCTTACAAATATCATC
AATTTTGTGTCATGAAGTTCAGATTTTTTTGACAGACGGGGTGACGTTTG
TTTCTGTCCCAACAAGTAAATTTCCATCCAGGGACGGAGGGACGGGTCCT
GGAGACAGCCCTGCCTCAATATGTTACTCCCAATGACTGCATGCGACTGT
GGGAGGGCACTGGCATAACAAGTGGGTTAGGGCTGGCAGGTTCCTGCCTG
GCCTTGAGCAGCTCAACTGTGGGTTGGAATTCTTCTAGTGCAATTTGTGT
GGAGGGAACCATATTTGCACTAAGACCTGTACATGTGTAGTGTTTAACCA
CTTATTTGGCTTGAGAACTGTACATGTATATTTCATCCCTATCTCTACTA
TCTGGCCAAGACCTGCCAAAAAGATATGATTTACCTAAAGTAGATCTAGA
GAGGATAAAGGGTTATCAAAGATTAAAAATTTGTCAGCTACATGTACATA
TAATAGTCAACAAAATAGCACAAGAAAGTTACAAAATAGCTCAAGAAGGT
TACATGTATGAAGACTAGTTAACATACATGACATTGTAAATCTCTGAATT
TTATCCAGTTGTAGATTTTGAATTGTCTTTATAAAGTTTATATATTGTTT
ACCTGGATGCCTAACCTACATAAACGTATGAGATTGTAATGTTTGTGTCC
AGGTTATGGATGAACTTGAGCTTCAGATGAGTTCAGGAGGGAACATCGTG
GACTACCACAGCTGTGAGATGTTCCCCGAGAGGTGGTTCGACATCGTGTT
TGTGATGAGAACCAACAACACCGTGTTGTACGACAGGCTCAAGAACAGGC
AAGTTTTATGCTATTATGTACAATTGTATCTATTATTCGCATTAAGAAAG
AGAGCAAAGAAAGTAAGAACATTGACAAAAAAACAGCAGTGGGAGACCTT
GAAAAGGTGGCCCTAAATCTTGTGATTAGTGATGAAACTACTGTAAATGC
AGAAATGTTCGTGGTGGTTTTATGTTCGCAGTTTTCGTGGTGAACTTTCA
GCGCGAACTTCAAACCACCGTGAAACTTTTTGCCCACCAATGACTGTAGC
GCTACTATTGTTTCAAACGCGAACTTAAAACCACCGCGAACACTCCATTT
TCTCCCTACCGCGAAATAAAAACCATGCAAACTTAAATGCATTTACAGTA
AGTGAAATTGGAAAAAAATGTCTACAACTTCCCAGTCTTTCAGCTAGGAA
AAGCCAAGTCTTGTCTATAAGGATGCAAGCACCATATAGTCTAGAAATAA
AATGTGTTAGAATAAACCATTGCAATTTTTATTTTTTTGAAAGACAACAA
TGTACGAATTTTGAGTTAGTAATCTATCTCTTTTTCCTTTCCAGAGGGTA
CAGCGACAAGAAGATACAAGAAAATGTTCAGTGTGAGATTTTCCAGACAC
TGCTAGAAGAGGCGAGGGAGTCATATAAAGTAGAGATTGTTCACGAGCTA
CAGAGCAACACACCACAAGACATGGAAACAAACCTAACCAACATCCTACA
GTGGATGGTCCAGTGGAAAAATGACCACTCATAAACACTTGACGTCTTAC
AGATGAAGTTTTATTTAAAAAGCATTTATATGATTTTGCTGTTCTTTTAT
TTTGATATTAATTTGAAGTAAGATATGGGTATGCCATGGCATATTGTTTT
CTTTTTCTTTCTTGGGGAAAACAAGGAAGGAAATGTACAAAGCTTCTTCT
TAGTAAATAAAACAAGACTGTGTCATCACTGGTTAGCTGTATAGAAAGAT
TAATGGTCATGTAAACTTTCCTTTAGAGTGTGGCCACAATGAAATGATAA
CTGACATTGACAATAGTATCTTTATCACTGACCTATTGGGTCTAGTTAAA
TATCTTTGCACTTCTAACGCTGATGTGTTTTTTTATTGACCTTTAGCAAG
TTAACTTCACAAGTTTGCTACACACTGTTTATGCCATATAGAAACAGTGG
AGTCTACATATGATTATAATGTGCAGGATTTTTTGTACCATGCAAACTGG
AAAGAATGACATGTATGTACAAAAGGACATGTTGTTATGACAAATTGTAA
TGACAGAAGCTGGCAAATTTCATTGAGGAAAGTGCTCAAATGTGAAAGAC
AAAAAAAGAAGACAAAGGATTACTAATATGTAATCTATCATCAACAATTA
CAATGGCCATACTGATGAAAATTAAATGAACTGCTA Coding sequence (CDS) from alignment at Sc0000002:3570424..3576309- >BlTCONS00007980 ID=BlTCONS00007980|Name=BlTCONS00007980|organism=Branchiostoma lanceolatum|type=CDS|length=333bp|location=Sequence derived from alignment at Sc0000002:3570424..3576309- (Branchiostoma lanceolatum)
ATGGATGAACTTGAGCTTCAGATGAGTTCAGGAGGGAACATCGTGGACTA
CCACAGCTGTGAGATGTTCCCCGAGAGGTGGTTCGACATCGTGTTTGTGA
TGAGAACCAACAACACCGTGTTGTACGACAGGCTCAAGAACAGAGGGTAC
AGCGACAAGAAGATACAAGAAAATGTTCAGTGTGAGATTTTCCAGACACT
GCTAGAAGAGGCGAGGGAGTCATATAAAGTAGAGATTGTTCACGAGCTAC
AGAGCAACACACCACAAGACATGGAAACAAACCTAACCAACATCCTACAG
TGGATGGTCCAGTGGAAAAATGACCACTCATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| BlTCONS00007980-exon-Sc0000002-1564993656:3576238..3576309 | BlTCONS00007980-exon-Sc0000002-1564993656:3576238..3576309 | Branchiostoma lanceolatum | exon |
| BlTCONS00007980-exon-Sc0000002-1564993656:3572776..3572927 | BlTCONS00007980-exon-Sc0000002-1564993656:3572776..3572927 | Branchiostoma lanceolatum | exon |
| BlTCONS00007980-exon-Sc0000002-1564993656:3571812..3571957 | BlTCONS00007980-exon-Sc0000002-1564993656:3571812..3571957 | Branchiostoma lanceolatum | exon |
| BlTCONS00007980-exon-Sc0000002-1564993656:3570424..3571265 | BlTCONS00007980-exon-Sc0000002-1564993656:3570424..3571265 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000002 | genome | Sc0000002:3570424..3576309 - |
Properties
| Property Name | Value |
|---|
| GeneID | BlCUFF003971 |
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