BlTCONS00007645 (mRNA) - B. lanceolatum

Overview
NameBlTCONS00007645
Unique NameBlTCONS00007645
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000002:695467..697314-

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>BlTCONS00007645 ID=BlTCONS00007645|Name=BlTCONS00007645|organism=Branchiostoma lanceolatum|type=mRNA|length=1848bp|location=Sequence derived from alignment at Sc0000002:695467..697314- (Branchiostoma lanceolatum)
CTGATGTTACGTTTAGGTACGCAGCACTAGCACAGATACTTTTCTGACTG ACATATAGTTTGGTGTGCAAGGATCTTTGTAGAATATTGGGAGTTTCTTT TTACACAACCAGTATATCTCACCTGCTGACGTTTCGGCATCTGTCACGTC AGACACCTTCCTCAGAGCTACTGACTGCCTTAAGTATCCGAAGTAGGTGG CGCTTTTGCGGTGAGAACACAATCCCAAACGTGGCTAAATTTGTATCCTC CCTCGTCCCGGTTCATCACCGGTGTTGTTTTCCTTATCCAGACGGCCTCC TTAATCCATCGAATACGTCTATTATCCTCTCTGTCTATATAATAATATAA TACCTTGGCCCCCTCCGCTATGACGCAGTTGTGTCTAGCAATGTGGTCTG TGCCAAATAACAATAAACTTATTACCATTACTAGTATCGCAGAGATCTCG ACCGTTTCTCCACTTGGGTTGATCAAGTCAGCCCTGGCAACCGATCCAAA CAACCCCCATCGTGCGTACGTCAATGTCACGTGGACCCCTACAATGGCGC AGATTGGACAACACGTTTTCTGCTTCCTGGCGCAGGATACCAATAGGTGA GGGTGTCTGAGACCGGGGAGGTCTGTTTTCCAATGGTGTATAACATACAT GTGTTGCATTTGGACGTATATTTGCAAAACAGTTATGAAGATGAATCAGC AATATTTGAAATTTGGGACCCAAAAGTCTACAATATGTCCCTTTAATTTT CTCGACATTTACGTGTGTGACTTCCGATCTAGGATCAACTCCGACCAGCG CTGCATCACACTTGTCTACGACGGTGAGAAATGTTTTGAATTTCTGTTAT TTCATGAAGAAAAGTTCATCAAGTAACGTTATGTACTTAGAGACGATTTA GTCTCTGATAAAACTTTATTCTTCCGGACGTTTCGAGTGACGTCCATATC TCTTCTGCAGCGTTACTTTCTAGTAACGCCGAAGAAGAGTGGTGTCAATC GAAACATCCGGAAGTAATCTCTGCATTTTATCCAGTTGTAGGGATTGAAT TGTCTTTAGATATTGTTAACCTGAATGTCTAACCTTCATTAACGTAACGT TACTTTGATATCTTCAGTGTACAATTTCAGAGTTGGGATTGCTTATGATG TTGCAAAAAGTTTCCAATGTTTTCTCTTGTCATTGGACATTCATGTCTGA GCTACAGTCATAATTAGTGGCGCGTACCTAAACCCCGGACCTGTTCCGGA CCTGTTCCTAACCTTTAGGTTCAAGACCAAAAAACATCTGGAAACAAGTC CGGACTTGAAAAAGAATCTCTCGCTTTTACACTCCATTTTGATTTAAACC ACTTAAAGCTTCCTTAGATCGTGAAATTTGCACTGGAAAAATATGAAAAC ATTGCTGTTTTTTGTTTATAACTGAACTTCTGCATTAATTACTGACTGTA TATAATTTTCAAATTGTATGTAAAATATATGCCAATATGCAATTTTACAT GAAACAGGAAAAAAATATTCGTAGCACACAAATTCCATTGGTTCAAGTCC GGACTTTCAAGTCCAAACCTGAACCTAAACCTTTGGACTCGAGTTCAGAC CTAAACCTAAACTCGGGTTTAGGTACGTACCACTAGTCATCAGAGTGCAA TTTCCAGAATAAACAAGGCTGTGGGATTGCATATGATCTTGCAAACATTT TTCAATGTTTTCTCATTCATGTCTGAGCTACAGGAACACCTGATGTGGAT GAATGCCTGGTCAACAACGGCGGCTGCTCTCACGACTGTGTGAACACGGA CGGATCGTACTTCTGTCTGTGTCCTGCTGGGAGAGCACTGAACGCTCT

Coding sequence (CDS) from alignment at Sc0000002:695467..697314-

>BlTCONS00007645 ID=BlTCONS00007645|Name=BlTCONS00007645|organism=Branchiostoma lanceolatum|type=CDS|length=381bp|location=Sequence derived from alignment at Sc0000002:695467..697314- (Branchiostoma lanceolatum)
ATGACGCAGTTGTGTCTAGCAATGTGGTCTGTGCCAAATAACAATAAACT
TATTACCATTACTAGTATCGCAGAGATCTCGACCGTTTCTCCACTTGGGT
TGATCAAGTCAGCCCTGGCAACCGATCCAAACAACCCCCATCGTGCGTAC
GTCAATGTCACGTGGACCCCTACAATGGCGCAGATTGGACAACACGTTTT
CTGCTTCCTGGCGCAGGATACCAATAGGATCAACTCCGACCAGCGCTGCA
TCACACTTGTCTACGACGGAACACCTGATGTGGATGAATGCCTGGTCAAC
AACGGCGGCTGCTCTCACGACTGTGTGAACACGGACGGATCGTACTTCTG
TCTGTGTCCTGCTGGGAGAGCACTGAACGCT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00007645BlTCONS00007645-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00007645-exon-Sc0000002-1564993656:696719..697314BlTCONS00007645-exon-Sc0000002-1564993656:696719..697314Branchiostoma lanceolatumexon
BlTCONS00007645-exon-Sc0000002-1564993656:696492..696532BlTCONS00007645-exon-Sc0000002-1564993656:696492..696532Branchiostoma lanceolatumexon
BlTCONS00007645-exon-Sc0000002-1564993656:695467..695581BlTCONS00007645-exon-Sc0000002-1564993656:695467..695581Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000002genomeSc0000002:695467..697314 -
Properties
Property NameValue
GeneIDBlCUFF003744