TCONS_00060763 (transcript) - C. hemisphaerica

Overview
NameTCONS_00060763
Unique NameTCONS_00060763
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length973

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00060763 ID=TCONS_00060763|Name=TCONS_00060763|organism=Clytia hemisphaerica|type=transcript|length=973bp
aatgaacttgttgctaaaattttcagcattatatttGTAAAAActccaaa
acaaaaacaagcgAGAAGAGATGAAAAGTCATATGATATACACATTGTTA
TTGGCTGTTTACCTAATTACGTTTCCAAATCACCAATGCTATAGAATCGC
TGACTCAGTAGAAAGAACATTAGAACTTTACAATGAAATCGATGATGAAA
TTTTAGCAGCctcagaagaagaaaaggaaaaacgTGAAAAGAAGAAATCT
AAGGAAGAACTTtataaagaaattcaagaagAATTGACAGATTTGGAGAA
TTTAAACGATGttgatgatgataatgatgaCGATGAAGATGAAGTTACTG
TATCAAAACTATCAGATTCTTCTTTCCAATTAGGTCGATTCATACGACAT
CATACAAGGATGGGTGTTCGTAGATTAGGCTGTGTTCCTGGAATACCTTA
CGAAGACTGCAAAGTGAAATTTGTTGACGGTGAATTGAAATATGTCTGTG
AAACAATAACACAAAAGATTTGTaataaatagaaattttatttcagaTTT
ACTCAATAGTTGCGACAATGATTGCTTCTAGCACTGATAGAATCTCGATC
AATAGATGATATCGgtttaacgtgaaaactcagatttgactcccgagaat
tgcccacaatgccttgcgcggaaaaaagttcacggtgaaattatttccgc
acaaagcattgtgggcaattctcGTGGGTCAAATATGAGTTTTCATGTGA
AACCGATATCGTCTATACCTTTTAAACGGTTCACGGGTTTGGTAAAAAAT
ACAGTTACCATGCAAGGGtagcaaaattttgatgaacgagggggacctaa
ttaccagagggttggaaattgtacttctgaaaaccccaaaataaggtaaa
tatagccTAAAATAAGattatttagagcaaaataagggtccCTTTAAAAG
CtgaaagctttttaaaaatccAT
Run BLAST on NCBI

transcript from alignment at scaffold_349:8202..29384+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00060763 ID=TCONS_00060763|Name=TCONS_00060763|organism=Clytia hemisphaerica|type=transcript|length=21183bp|location=Sequence derived from alignment at scaffold_349:8202..29384+ (Clytia hemisphaerica)
aatgaacttgttgctaaaattttcagcattttatttgtaagtcaacattc
ttttcttttgaattcgCATTAACCAAGCAttgcagattctagatttggat
ggaattaaccttgaccggtggatacgcatgcgtagagagtaaaaagctgt
ttaaaaaactaaggaaaacgctggtgcttgcatCAGAACTAAACGAGGAT
ACTTcaggaaattcaaaaaatgattgaatatttgattggtggtcgtgctt
aatcaacattcttgcataagccttatattaggatagacatgaactagtgg
tcgtgctagtatttttgaaatcaattttagatattttgatccaaccagaa
gctctctggtaggcttttatactctgcatgGCAAGTCCGattgccgtttc
cagtttaactccgTCGattagacttggtcggattgaaaatttttcatttt
ttacgatttgaagtttcaaaatcgagattttctccatcgttagattattt
ttagcctcaagacATAGCTttgtgcgtcaatgcatcagaaacctatttgt
aaggacaagacatttcattcccaaaacatcttacgtgagctctacatttg
tttaaaatattcCAGATTCTCTAAGTCTTCTCAAAATTTCctaggaatgt
tgaatgaaaatcgtataatactagttttatttcataattggggactgaaa
gtgccttaaaacggttttcataccttgtaaatgggtttttgtcaagcttt
tctactaTTTTttgtccaagtctaccattttaaatcacgtaacgttggaa
acactctaaaatagaaaagaaaaaaaactgacggaatttttttaattttt
tcaaaaattgacgtcaaataaaaaatttgaacttgtagaaaattagaaat
ggaaaaaagtCTGAAGTTGAAGACGTGCTCTGGGCCCGGTTGTTCAGAAG
TGGATTAACGGTCGATAAGTTTAATTTTCGACTAAATCTCGATTAGCGCC
GATTAACACAGAACCGTCGGttgttcgaaaaaaattgggctTAAATCTGG
ATTAAATCCCGATTAAATTGGCCACATTTTAATCCTGCTCTGACCCAGGA
TTAACGAAGATTAAGAAGCTTTTTCTTACAAATAAGTGAAGTCACTGCAT
TGAAGAAAGAAAGTCGACTGAAAACATAAACTGCTTCCTGCGACTGAGGT
CCGTGCCAAGTTTCCTACCTTTTCCTACCATCAAAATAGGAATCGATCGG
CGCGAAGACCGTAATGCGCATGCTCAGCTGAGACATGAAAACCGTGTATT
cgaacgaaaaaagattttcgaatgttttgaaaacattcatttttttacga
tttgaagtttcaaaatcgagatttgcTCCATCTCCATAACGCGGCAGTAT
CCCACACAAAATTATCTCCATAATTGGATCTCAGACTTAGTTTTTGAACG
CAATTTTATAGATGGTTATGTTAATATAAAGTTAATAACAAATTTGGAAA
GTCGTTCTCGGTAAAACTCTCGGAAAAACGACACATTCTCGATAAACACT
CCCTAAGATAAATGCTGGCAGCAGCATCCCACCTATTATCTCTATAATAT
GATCTCAGActtagttttaaattttttttttatcaataaacaCATCCTTA
AGACAAATTACAGATGGAAACTCGGCGAAAataagaacgaaatataacac
acgtttccaggctattttggcacgtggtgttATATGGTATATAGGCAtat
ggtgctatggggtatataggtatataggtatatgtacctcacgaaatccg
tgccaacggcagatttcgtccaacggttttgctcgtgcagctaGCAGCGA
ATTTTGtggaataaaaataaagaaatataacacacgtgttcAGGCTATTT
TGGCATGTGGTGCTATatggtatataggtatataggtatatctaccccac
gaaatccgtgccaacggcagatttcgtccaacggttttgctcgtgcagcc
agcagcaaattccGTGGggaaaaaagaacgaaatataacacacgtgttcA
GGCTATTTAGGCaggtggtgctatggggtatataggcatatgGTGCTATG
GGTATATatgtatatgtaccccacgaaatccgtgccaacggcagatttcg
tccaacgattttgctcgtgcagccagcagcaaattttgTGGAAtagaaaa
agaacgaaatataacacacgtgtccaggctattttggcacgttgtgctat
ggggtatataggcatatgGTGCTATGGGTATATATGTATATGCACCCCAC
GAAAttcgtgccaacggcagattttgTCTAACgattttgctcgtgcagcc
agcagcaaattttgtggaataaaaaagaacgaaatataacacacgtgttc
aggctattttggcacgtggtgctatggggtatataggcatatgGTGCTAT
GGGTATATatgtatatgtaccccacgaaatccgtgccaacggcagatttc
gtccaacgattttgctcgtgcagccagcagcaaattttgtggaataaaaa
agaacgaaatataacacacgtgttcAGGCTATTTTGGCAAGTGGTGCTAT
ATTGTATATAGGCATATGGTGCTATGGGTATATatgtatatgtaccccac
gaaatccgtgccaacggcagatttcgtccaacgattttgctcgtgcagcc
agcagcaaattttgtggaataaaaaaaaaacgaaatataacacacgtgtc
caGGCTATTTTGGCATGTGGTGCTATAGGTATATatgtatatgtacccca
cgaaatccgtgccaacggcagatttcgtccaacgattttgctcgtgcagc
cagcagcaaattttgtggaataaaaaaagaacgaaatataacacacgtgt
ccaggctattttggcacgtggtgctatggggtatataggcatatgGTGCT
ATAGGTATATATGTATATgcaccccacgaaatccgtgtcAACGGCAGATT
TTGTCTAACgattttgctcgtgcagccagcagcaaattttgTGGAATAAa
atagaacgaaatataacacacgtgtccaggctattttggcacgtggtgct
atatTGTATATAGGCATATGGTGCTATGGGTATATatgtatatgtacccc
acgaaatccgtgccaacggcacaTTTCGACCAACgattttgctcgtgcag
ccagcagcaaattatGTGGaataaaaaagaacgaaatataacacacgtgt
tgaggctattttggcacgtggtgctatggggtatataggcatatggtgct
atggggtatataggtatatatgtaccccacgaaatccgtgccaacggcag
atttcgtccaactgttttgctcgtgcagccagcagcaaatttcgtggaaa
aaaaacgaaatataacacacgtgtcgaGGCTATTTAGGCaggtggtgcta
tggggtatataggcatatgGTGCTATGGGTATATATGTATATGTACCCGa
tgaaatccgtgccaacggcagatttcgttcaacggttttgctcgtgcagc
cagcagcaaatttcgtggaaaaaaaacgaaatataacacacgtgtccaGG
CTATTtaggcacgtggtgctatggggtatataggcatatgGTGCTATGGG
TATATatgtatatgtaccccacgaaatccgtgccaacggcaaatttcgtc
caacggttttgctcgtgcagccagcaacaaatttcgtggaaaaaaatgaa
agaacgTGTCTTGCTTTGCAGCTCCATTATGCCGTTTGTCACAACAGTTT
TCCATTATTATTATCAAGCTCTATAATACCGGAAAACATAGATTTTTAAT
TAAAaggctcattattttttgtaattGTCATAAAATACACTTTTTGTTTC
TTATATCAAGCataattaaaatcttttcaacacaagtaaaatatttttta
cctaTGTGATGATTAAAATCGAAGGCTGTCAATTAGACACGTgtgtttgt
ttttgatttgcTCCTCTCATCTTGACACCTTTTTGAAGTTTGAACTTTTT
TTGACGTTAAACAGTAATTATCATGAATTTGAACACGTGTGGAATAGTAT
TGTGACCAGCTAATAGGACAACTGGTATAATACTCTCTCGTGACTTCTCA
ACcgacacgctttttttataagaaaggcGTTTTCCCAATTCATATTTCTT
GAATTCAGACAGGATATGTTCTTAAGACGGTCTTGTTTTTTGCCACCGAG
CGGAGCGTAGGTGGCTTAATAGTTTCGCGATGGGTGAGAGGCGggttaaa
atttttcgctgtttttgtttttgtttttgtcgtcTTTCAGTTTCCGTATG
TTTCACATTCCGTAGTTTATCCGAGCAAtacttttggggcgcaaattatg
gcgtgggtgtttggctgcgggcgtactacggccaatattctaaaggtgga
ctcactcacaaagataaaaaacaNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNcatcg
gcacgaaatttaaaaagtcaaattttagcttcacttttttttgctggaga
aagcttaaagttgcaaatctagcccttcgggcttagatatctgtgatcAA
AATACGCTActgtaagaagtgtaaccaagcgtTTGTAAACAtattcatcg
tgagaactttttaatggctgcttcaATGCACCACATGCTGGACatgcttt
ttaacttttgaaatttgctgctgctgtatagatttttattatgttttctg
gtctttagtagagtatttaaagaggtttattattcgtttactactaagta
ttttatgtttgtgtagttagtgaatgcaccaataaattgatgaTGCTCAG
TAattagtacaaaaagagttaattttccacaacatcaacaacaacaCTAT
AATAGCAACACATAGCCCTCTTATTCACTAAAACTACAAAAAACACAGGT
Gtgatcttttttttccttttttcaccagatagttatgtgttaaatgttaa
ccagttgtgacaaacagtcagttttagaaAGCATTTCCACGTATTTCCta
aatcatgtcaattgaaattcagcaatcatttttttGCCAGTAGTCAAACT
GTTGAACtattcaacaaaatcaaactgttcgattaaaattttttgattgg
tttgattatataagtttgatgacgacagttttttatccgatgaagtttga
ttggtatTCAATGAGTTTGGtttaagaaaaagttccagcttttcctcccc
gatcCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATGGTTC
CAGTTATTGCTAGCGCAACAGCTCTAGCCTAAACGATCCCTCactacaat
cattggattaggagggtgaggtatcacactttctttattctgaaaattaa
aaaaaaggctctttaaagctttttagcgtgggcgtctgctaataagccgt
cggaaATGGGCAACAAGGCAATAAATCAAGCTTCAATATGGAACTTCACT
GAttttgatacaccttttgctaatcagggttttcattttgaatcactAAA
AACTCTATtggtaccgttgttttgtataagattcccatttctgcaccaag
attcttgatacttttctggaatctttcccctatataCACTTTACGAGATA
ACCAGCAAGAAATTGGGGAGGGTTcatttaatgggatgcagtttaaagca
gttataaaaaagtcattgttgtgatttgtacttatttagatttattgcat
atagaaaaaccgcttagcccatcatttttatatttggatggattgtttat
attgtcatttttaaaactaacccatccgcatcatttttatttatttagat
agattctttacattgtcatttttagaaaaaaagaaaatcttcacagCTAT
TTCTTCATGTACCCAGCCGAAATATTGTCTTCTATAATTGCCActtttaa
agaaagttaatctCCCATTACAGAgcttttttttcatcataaaatcgact
tccctaaagtaaaaataagagaaagtaaaaaataaaaggataaaaataag
taaataaataaataatagtaataatatttaaacatattatttgaaaggtg
gcagttagtgtaagctataCAAAGATTTGAGCCTAacgaaatattcttat
aaacagGGTTCTGGCAATAAAAAAGCTgtacccgattttcgaaaattata
aAATGTAAACTTATAAagtatgcatttaaaaaaagcgGGTCAACAACTTC
AAAgtgctttaatttttttaagtttttcattatttagaataatttttatA
CCGTTAgataagattttaatttttatttcaaaaaatatatggcatttaca
ataaaattcaagattttaagTTATTGATATGTTGTTAATGTTTCAagaaa
aacatatcaaaacgGATTTGGCTACTGTTgcgattttagtttttttttaa
tttccagaAGAGTTTTTAAGTTACGATTTTATACCATTGTGACGCCTGTG
AAATTGTGAATCtcctaaagtaaaaaaaattaacattgcgTTGATATTTA
AAAACAGTTAAATATTAGCAAGTCTCgtcaaaaaattataagaaaatatt
CCTAGAAAAAATTGCTCACTTTATGAAAGGTTTTAATTGATGATTACTAA
ATGAAAGTGACCTTTTTCAGACACCTCGATTTTCATAGTTGTGTAACACA
AATTTAGAATTAGAAAAAATCCATCACGACAATTACCATAAAAGGCatga
aaagatttgaaatttctcgTTCGTTTTCGGCTTGTTGTCGTATGTCGTTT
GATTGACATTTGTTTTAACACTTCTATTTTCGTTAgttgtaatttttgat
tgacagctTCATTTTATGGAGATAAAGGAAGATAAATGTTTACGAGCTGT
GCAGCTGGCTGCCAGGGGATAAATGTCATAGTACTGGACAAGAAGAGATA
ACTTGATGCTTCActgcatcagaaacctatttgtaaagacaagacatttc
attcccaaaacatcttacgtgagctctacctttgtcgaaaattttccaga
ttctataagttttcttaaaatttccaaggaatgttgaatgaaaatcgtat
aatactagttttatttcatagttggggactgaaagtgcctgaaacggttt
tcatatcttGCAAATGGGTTTTGGTCAAGCTTTCATAcgatttttagtcc
aagtctacgattttaaatcacgtgacgttgttggaaacactctaaaatag
aaaaaaaaaagtgacagaatttttttaattttttcaaaaattgacgtcaa
ataaaaaatttgcacttgtaaaaaattagaaatggaaaaaaaagtcTGAA
GTTGAAGACGTGCTCTGGAAAACTCGTCAAAAATGTACttgttgctaaaa
ttttcagcatttaatttgtaagtcaacgttcttttcttttcaattcgcat
tacccaagcatagtagattctagatttgaatggaattaaccttgaccagt
ggatacgcatgcgttaagagtaaaaagctgtttaaaaactaaGGAAAGCG
CTAGACGAGGATAGTTCAGGAAAATAGAAAATTgattgaatgtttgattg
gtggtcgtgcttaatcaacattcttgcataagcctgatattaggatagac
aggaactagtggtcgtgctagtatttttgaaatcatttttagatattttg
atcCAACCAGAAGCTCggtggtaggcttttatactctgcatgGCAAGTCC
GattgccgtttccagtttaactccgTCGATTtgaggatgttttatgcttg
agaAATGCAAAGCTTTTTTCTCTCATCGAGCCTTTGAAATACTTTATTTG
CAAAAAGAGACTTGGTCggattgaaattttttcattttttacgatttgaa
gtttcaaaatcgagattttctccatcgttagatTATTTTTANAAAatttt
ttacgatttgaagtttcaaaatcgagattttctccatcgttagattattt
ttagcctcaagagataGCTtgatgcgtcaatgcatcagaaatcTATTTGT
aaggacaagacatttcattcccaaaacatcttacgtgagctctacatttg
tttaaaattttccagattctataagttttcttaaaatttccaaggaatgt
tgaatgaaaatcgtataatactagttttatttcataattagggactgaaa
gtgccttaaaacggttttcataccttgtaaatgggtttttgtcaagtttt
tctaccattttttgtccaagtctaccattttaaatcacgtaacgttggaa
acactctaaaatagaaaagaaaaaaaagcgacggaatttttttatttttt
tcaaaagttgacgtcaaataaaaaaattgcacttgtaaataattagaaat
ggaaaaaaattttgaaaatgaagacatgCTCTTGAAAACCGGTCAAAAAT
GTACTTATTGCTAAAATTTTGAGCATtttatttgtaagtcaacgttcttt
tcttttcaattcgCATTACCATAGTATAgtagattctagatttggatgga
attaaccttgaccggtggatacgcatgcgtaaagaataaaaagctgttta
aaaaaactaagaaaaacgctggtgcttgcaccaaaACTAGACGAGGATAC
ttcatgaaaatcgaaaaatgcttgaatgtttgattggtgattgtgcttaa
tcaacattcttgcataagccctATATTAgtatagacaggaactagtggtc
gtgctagtatttttgaaatcatttttagatatttctATCCAaccagaagc
tctctggtaggcttttatactctgcatgGCAAGTCCGATTGTCGTTTCCA
GTCTAACTCggtcgatttcaggatgttttatgcttgagaAATGTGAAGCT
TTTTTCTCTCATCGAGCCTTTGAAATACTTTATTTGCAAAGAACGCATAT
ACTTGGTCgaatcaacgatgtaaaaataatagataaccaactacctctag
aaggcacttctcccaagagaacaaccattgttttcctattgaaattagca
ctctattaaaaagctctgtgtgcagtgcgtgttatgcatttagctagatt
ttgacacacttttagACATcaactgaattgatagaaaatttgtattgtta
tttactgcaaattttggaatttttttcaaatgataaagctaccaatcttt
agacaaattgactacggatcggcctgataccacttaatcttcatctagat
aaataaacgctcataaaatactgttatctgaaaaatatatgtgtgatttg
aaatgcgatatctcacgtatgaaaagtgcataaaggttgcatgatacaaa
ataaacagatgaatgtttatagaacaataatatctaattaaaaaattcct
tctgtgaggctgcctataggaaaatacactttttctaacccaaattttgg
aaaaatatatctcacgtgatcgattctgtccaatagaaggttgcaaatga
agcaagtttatatttaattccaatttttacgatgcaaaatgtcattaata
ttattttacaaccgtaacacggatgatttttgagaatcaaagcaagttgg
ttatctattatatTTACATCGTTGGtcggattgaaaatttttcaattttt
acgatttgaagtttcaaaatcgagattttctctaTCGTTAGATTATTTCT
AGCCTCAAGAGATAACTTgatgcatcagaaacctatttgtaaggAGAAGA
CATTTCTttcccaaaacatcttacgtgagctctacatttgtcgaaaattt
tccagattctataagttttctGAACATTTccaaggaatgttgaatgaaaa
tcgCACGTGCTCtggaaaactggtcaaaaatgaacttgttgctaaaattt
tcagcattttatttgtaagtcaacgttctttgcTTTTGAATTCCCATTTC
CCAAGTAttgcagattctagatttggatggaattaaccttgaccggtgga
tacgcatgcgttaagagtaaaaagctggGTAAAAACTAAGGAAAGCACTG
GTGCCTGCACTAGAACTAGACGAGGATGgttcaggaaaatcgaaaaatgc
ttgaatgtttgattggtggtcgtgcttaatcaacattattgcataagcct
tatattaggatagacaggaactagtggtcgtgctagtatttttgaaatca
tttttagatatttctATCCAaccagaagctctctggtaggcttttatact
ctgcatgGCAAGTCCGATTGTCGTTTCCAGTCTAACTCggtcgatttcag
gatgttttatgcttgagaAATGTGAAGCTTTTTTCTCTCATCgagccttt
gaaatattttatttgcaAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNaaattttcaa
cattatatttgtaagtcaacgttcttttcttttgaatttgcattacccaa
gcatagtagattctaaatttgaatggaattaaccttgaccagTAAATACG
CATGCgttaagagtaaaaagctgtttaaaaactcaggaaaacgctggtgc
ttgcaccaaaAATAGACGAGGATAGttcagaaaaatagaaaaatgcttgg
atgtttgattggtggtcgtgcttaatcaacattcttgcataaACCTTTTA
tgaggatagacaggaactagtggtcgtgctagtatttttgaaatcatttt
tagatatttctATCCAaccagaagctctctggtaggcttttatactctgc
atgGCAAGTCCGATTGTCGTTTCCAGTCTAACTCggtcgatttcaggatg
ttttatgcttgagaAATGTGAAGCTTTTTTCTCTCATCgagcctttgaaa
tattttatttgcaAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNcctttgaaatattttatttgca
aaaatggtatatagacttggtcggattgaaaatttttcattttttacgat
ttgaagtttcaaaatcgagattttctccattgCTAGGTTATTTCTAGCCT
CAAGAGATAACTTGAtacgtcaatgcatcagaaacctatttgtaaggaca
agacatttcattcccaaaacatcttacgtgagctctacattTGTTTAAAA
GTTTCCAGATTCTAGAGTTTTCGTAAAATTTCCAAGCTATGTTGAACGAA
AATCGTATaatactagttttatttcacaattgggaactgaaagtgcctta
acggttttcataccttgtaaatgggtttttggcaatcttttctaccattt
ttagtccaagtctaccattttaaatcacgtaacgttggaaacaatctaaa
atagaaaataaaaaaaagtgacggaatttttttaatttttcaaaaattga
catcaaataaaaaatttgcacttgtagaaaattagaaatggaaaaaaagt
ctgaagttgaagacatgctctggaaaactggtcaaaaatatacttgttgc
taaaattttaaacattatatttgtaagtcaacgttcttttaaTTTGGATT
Tgcattactcttaggttccaaataaacgggcccccccgcttgttaatttt
tcgaaatttttccaacccccccggaccttataatttattcatagaattat
atttcacaggtctatcgacctctacgaaataattttagatttataaattg
tctaattcttcatctgtcgtcNTcaggaaaacgctggtgcttgcaccaga
gttagacgaggatagatcaggaagatcgaaaaatgcttgaatgtttgatt
ggtggtcgtgcttaattaacattcttgcataagccttatattaggataga
caggaataAGTAAAACGCATGTAGACTCAAAattattcattcaaaaagat
gtaaaaatggCGGAGAAAATTCAGGACAATATATAAAAACAACTGAATTC
AGCATCAATTAATGACCTTTGCAGCCCTTCTGAATGTGTTACATGTGAAG
AAGGAAAATCCAAAGACACAATTGAATGTAAGAAGTGCAATCGAATCGTA
CACTACATTTGTTCAAAGCTCCCCGTCTATCAAATCCATTTATGTCTAAC
ATACAAATCGAGAGCTTTTATCTGTCAAAATTGTGTCGTGATCACCCTCT
GATCTATTTGAACGGGTTAATTCATGCGAAACGTCAAAAATCTCAGGATT
CCGAAAGGAGATAAAAGCTTGCAAAAACATAATGAAAGCCCAAGATGTAG
AAATCAATCAACTAAAGTCCGAAGACGTCAATACTATTATCAGcgaaatg
aaagaaagttttgagACCAAAATGGCAACAAtcgaaaagaagatggaaaa
catcattgaaaagaaagaagaagtaaGACCACGAAGCTACGCAGGAGTCG
TGTCGAGGCAAATcgagaagaacatcaaaaacgCATTTCGGAGGGAAAAA
AAGGAGGAACGACTGATGCAATCCACAGTGTGCAATTTAATTCTTCATGG
AGTTGACGAATCCACTGAAGATTCAGAGGAGTCAACCAAAATTTACGACG
AGGAATACCTTCATGAAAAAGTCTTACCTTTGATGCTACGCCTAAGGAAT
ACAAAAATAGAAGAAACACAAAGAAtcgggaaattttcaaaagaaagaga
aaatgaGAAACTTCAAACACAAGTATCACAAGTTCGATTTGCaacgaaga
agacaaaaatacagtgCTGGGAGCAATCACTAAAGGAGAAAGATTGCCCT
TCCAGATAACAGAAGAGCTAACAAAAAGTGAAAGGAAGACAATTAAAGAG
TGGTGTATGAAAGCCCAAGAAATGAATAGTTCAATAGAGGACACAAACTT
CAAATCTAAAGTTAGGGGGAGCCCTAGGGAAAAACTCTATCTTAAGAAAA
TTATAATccgaacaaagagcggttcatagaggcccatgtgctcgcaCGGT
GGCCTACAAATTtgtagttttatttcataattggggactgaaagtgcctt
aacaAAATNTGCTCGCACGGTGGCCTACAAATTtgtagttttatttcata
attggggactgaaagtgccttaacaaaattaaaaaaatactcacaacATG
GTGATAAtaataagaataaaaaaaattaaaaaataagaataaaaaaactt
aagaaGTTAAAGAACAAAGGGTtccaaagcttcaaaaatttcggatgttc
ttataaaacaaatgaGTATCGATGTTACAtaacattaaaaaaacattcgt
CATTTTTGAACGATTTCTTGTTTGAGCAAGATTTTTACACAGAACAgaag
tcatttttttcttcaaagaaattttacaaaaaacgATGACATAACATTAT
GACATTTCAAGGATTGTATAGAGATTTCGCTGAATTCAAAGTTAATATTC
GCTGAATAAAGACTTTTTGAAGAGTGTATATTCATTTTAGAGGATATCAT
CGAGAGTTTCAAACCATTTAAAACTAACTATGAAGACAACAATTTTGGTC
TGTTTGTTAGCTTACTTTGTCTTACGTGTTGAAAGCTTTAAAGTTGGCGA
TACGGCCGATTCTGAATCGCAAGACATTCAAGAATTCGACAGATTATACA
AAGAAATTGAAGAGGAAATAAACCATTTAGCGGATNTGGCGATACGGCCG
ATTCTGAATCGCAAGACATTCAAGAATTCGACAGATTATACAAAGAAATT
GAAGAGGAAATAAACCATTTAGCGGATGAGAAAGAGGATCAAGACGGTGA
GATTACTATATCCAATCTACGAAATGGCGGCCGCCGTCGTTTTCACCGAT
TGATGTATGGGACTCAAAGGGTGAGACGAACTAGTTGTTACCCAGGACAA
CGTTATCAAGATTGTAAATGGATGTTCATTGAAATGGAATTGAAGTATGT
TTGTCAGTGGAAATTAAGAATTATTTGTAGTTGAAAGCTGCAATGAAGAC
AATATATACTATCCGAAGAAtttttgctgaatgaaaactttgagaaaata
caatgtaaaattttaaacaatttacaaaaatactttaagctttaaaatat
gtcatcattattttcaaaatctcaaaaatttcttaaatttttaagccaat
ttcatcatgaatattcttataaagtatattcttaaataaaagaaaaaagc
gtTTAGAAGGTCAGGGTATTGTGCATTGGGTAGAAAATGCCTTAAGTTTG
TTCCGAAATGAAAATGGCGCTTACAAAAAAGCTGTGTATTTGAAGTAGTA
TAAATAAAACACAAACTCACTAATTTCGTCGGTCACTCCAAGATTGGAAC
TGGTTCGATCTGTAATGTGACAACCTTCGTGGTCTCCTTGTGTTTCGTCG
TACGCTTAGATCAGACATCTTCTTGGGCATTCAAACCTTATCGTGGTGAT
TGACTCTCTTTAGCGAAATCTTTGActaaaaagatagaaaaacacTTACA
TTTGACCagaatgtcaaaaaaaattttgagattccacACAAAATGATTGT
ATTTTTTTCGTACATTTTATCCGAGTGAGAGCCACTAAGTTTAATATAAT
ATAATTGGAATTGGTGGGTGGTGGGCGGTGTAGCCACACAAATGGAAATT
CAGTCATTAGTTGCTAGGTCCTGGGCGTTTGGAGAAACGAAAATCACCGG
TCGAGTAATATTAAGTAACTTGATCGCAATAAGTGACCCGTTTGGGAGAC
GTGAGTGACGATTTTTGTTAACTCGACGTACACTAATGGAAAAGTTGGAT
CTACAAAGGATAAATAGCTAGACCATCACATCTTTTGAGCGaagaatctt
aaaatattctactttgaaaatattccaaattttttttaagcaaGATTTCC
TTTTTCTACATTTTGGAGAATTTGCACAGCAAAAATTGggagaatttaaa
ttttttactaTAAAAACAACGAATTTAAGAATCTCCTCACGCAAAAAAGC
CGGCAAAATTTGGTGCTTATCCTACCGAGGCAAGGTAGGCAAAACACAGA
TCGACATCGAGGCATATTTTAAGAGGTAAGTTGGATTGCAAAACGTTTCA
ACATTATTGTCATATGACCAAAAGTAAACAGATCAATGcaagaaaaatga
cgtaatccacaaagtaaataaaaatatgAGCTGACagatgaaaaatttta
atcttttcAAATGTCAGCAAATAAAAGTTGCTATCCCTCACTACAAATTT
GAAATAGTAGACGGTAATTTTTTATCGGCTTatatgtaataagaaatttt
attggTGAGATTTATTCAGTGGGACATTTTTTCTGTGGGTGTGAAACAAC
CTCGTACATGGCCTGGTtctcatttttttatgaatttgatgGTCAATAGA
ATGATATTTTCAACATCCTATACAGAAACACACATCCCTGTTTCGTggag
tttttgaattttgaattccttaaaattattttttcagtgaCCGtaatgga
agaaattttgaatggaatttgatttgtatatgtaatcacatgataacgag
tgcaattcgaatataattgcacgagtgatttttttgttattaattttccg
agtccgaaaggacgaggaaaattcgaaacaaaaaaatcacgagtgcaatt
ttcgaattgtacaagttatcatgtgattacgagctaatcgcacaatggct
gtcactactttttcccagttaggaaagtaaatcaCAGAAATTACActcaa
aatttttatatttttctcttctcttctcttcgtttttcttttattgttgt
ttattgattttctttctcacaaaataaatttcgatcGAATGCAAtcaaaa
cgttcgatgcaaaaaaaatgtaagaaaaatcattaaaatcaattttgtaa
acattggcgcggcattggagagtgtgattaacgattaattgctctctaca
ggatgcaattaacgattaattgctctctttgagggcgtgccaaataggaa
aaaataacccatcgtgcgattagccGGATAATTTGATCGTCCTCACTaca
aatttgtaatttttatttaaattcataCATCGATGTTGATAAACTTGTAC
CGTTGAGTTTCTTTTATGGGAGAGTTTTTCTGTGACACAGATAATAAGGT
CTGTAATAGGTATAGTATTGTGGGTTCATGTACGTTGGGTGGTGAAATCT
TAAGTATGTATGTATGGTATGCTAATGTATGTATGGTATTTGCAAATAAT
AGTTTCTAATATTTATACATGCTTTTCACGGAACATCAGGCGCACACGTG
TACGAATTAGCCAAAGAGCATGTTAACTCCatctaaataaataatttttc
ttccttttcattGCACAATTAAGTTATCAAGAATTTGTTCTAAGAGATTT
TTGGATGGTCAGGGTCTTCACTCTTCTAGAAAATCGGCTTTGAGAGACAC
ACGTTTTACTAAGTGGTTTTGTAGActagagtcgtttataatgcgtgtaa
tatagtAGTacaggcgttatatgataatacgataattgttacgggatatc
atttgttccctccattactttttgccttatttctactatgtctgaattag
tcgtctagcttgctagactagtggTTTTGAAGAAAACGATGCAAGTTTTC
AAGTTGTCTTTGACGTTCTATATAATACTATAATACATCAGGGAGACCAT
AGAAAGGGTTGACATATCTTGACGAATTTACTAACTacagtatacacgtt
ttttttataagaacatccaacattttttaagcctttagatgttcttaact
ctttgagttttaagcctaaaaatgctcttaacatattcttattttcaccg
atttttgagtatttttgtccattctcctaagaaatagggagatttagagt
ccacgaagccttaaaaagttcttaacttgttcttagtattttggccatcg
aagccttatgttcttatatagtttgttcttataaaaaaaacgtgtacggt
TTTCTTCTTAGGTAAACTTCTCATTATATAAATAAGCCTACCTTAATTTG
AGAAACCTTATAGTAAGTGTGAACCATTGAATTTTCCACCTTTAATCTTT
TTAAGCTGTTTAGGTTACAgtggaatctccataactcgaacgtaCCATAA
TACGTACCCATATATgacataattatttttttaaatctgactgAAGACTG
TCGGAAAATAAATTAGTCTCTAATCTTGACTGATATGACATACATTAAGT
ATTTGCTAAGTGGCGAATCGCCAGTTAAGGATTTTCTAAGTGGCAAGTCG
CCAGTTAAGGATTTGCAAAGCAGCGAATCGCCAGTTAAGGATTTGCAAAG
TGGCGAATCGCCAGTTAAGGATTTTCTAAGTGGCGAATCACCAGTTAAGG
ATTTGCTAAGTAGCAAGTCGCCAGTTAAGGATCTGCGACGTGGCGAATCG
CCAGTTAAATAGCTGGCTAAGTGGCGAATCGCCAACTAACATTAATCTAA
GTAGCGAACTACTACCGGTGGGCTAATAAGCGAATCGTCGGTTTATGATT
AAATTGATAACACGACTAAAATGTCATTTATGGGCCACGGTACGAAcgcg
cacggggaacacaaatttgctTGAGTGTAGGAAACTTCGAGTTATGGGGT
AAAATTTATAaaacattgttaactgaaggtaACATAAAACTTGTTAgagt
taaggagatattcgagATTCGAGTTCGAGTTAGAAAAACTCCATTGTATT
AGTGAGCTTAGGATATTTTCTTTCCAGCTTTTTTGTTCTTCTACAGGTAA
AAActccaaaacaaaaacaagcgAGAAGAGATGAAAAGTCATATGATATA
CACATTGTTATTGGCTGTTTACCTAATTACGTTTCCAAATCACCAATGCT
ATAGAATCGCTGACTCAGTAGAAAGAACATTAGAACTTTACAATGAAATC
GATGATGAAATTTTAGCAGCctcagaagaagaaaaggaaaaacgTGAAAA
GAAGAAATCTAAGGAAGAACTTtataaagaaattcaagaagAATTGACAG
ATTTGGAGAATTTAAACGATGttgatgatgataatgatgaCGATGAAGAT
GAAGTTACTGTATCAAAACTATCAGATTCTTCTTTCCAATTAGGTCGATT
CATACGACATCATACAAGGATGGGTGTTCGTAGATTAGGCTGTGTTCCTG
GAATACCTTACGAAGACTGCAAAGTGAAATTTGTTGACGGTGAATTGAAA
TATGTCTGTGAAACAATAACACAAAAGATTTGTaataaatagaaatttta
tttcagaTTTACTCAATAGTTGCGACAATGATTGCTTCTAGCACTGATAG
AATCTCGATCAATAGATGATATCGgtttaacgtgaaaactcagatttgac
tcccgagaattgcccacaatgccttgcgcggaaaaaagttcacggtgaaa
ttatttccgcacaaagcattgtgggcaattctcGTGGGTCAAATATGAGT
TTTCATGTGAAACCGATATCGTCTATACCTTTTAAACGGTTCACGGGTTT
GGTAAAAAATACAGTTACCATGCAAGGGtagcaaaattttgatgaacgag
ggggacctaattaccagagggttggaaattgtacttctgaaaaccccaaa
ataaggtaaatatagccTAAAATAAGattatttagagcaaaataagggtc
cCTTTAAAAGCtgaaagctttttaaaaatccAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_038182XLOC_038182Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00060763-exon-scaffold_349-1491911889:8202..8228TCONS_00060763-exon-scaffold_349-1491911889:8202..8228Clytia hemisphaericaexon
TCONS_00060763-exon-scaffold_349-1510915933:8202..8228TCONS_00060763-exon-scaffold_349-1510915933:8202..8228Clytia hemisphaericaexon
TCONS_00060763-exon-scaffold_349-1575043694:8202..8228TCONS_00060763-exon-scaffold_349-1575043694:8202..8228Clytia hemisphaericaexon
TCONS_00060763-exon-scaffold_349-1491911889:20103..20111TCONS_00060763-exon-scaffold_349-1491911889:20103..20111Clytia hemisphaericaexon
TCONS_00060763-exon-scaffold_349-1510915933:20103..20111TCONS_00060763-exon-scaffold_349-1510915933:20103..20111Clytia hemisphaericaexon
TCONS_00060763-exon-scaffold_349-1575043694:20103..20111TCONS_00060763-exon-scaffold_349-1575043694:20103..20111Clytia hemisphaericaexon
TCONS_00060763-exon-scaffold_349-1491911889:28448..29384TCONS_00060763-exon-scaffold_349-1491911889:28448..29384Clytia hemisphaericaexon
TCONS_00060763-exon-scaffold_349-1510915933:28448..29384TCONS_00060763-exon-scaffold_349-1510915933:28448..29384Clytia hemisphaericaexon
TCONS_00060763-exon-scaffold_349-1575043694:28448..29384TCONS_00060763-exon-scaffold_349-1575043694:28448..29384Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_349supercontigscaffold_349:8202..29384 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0467027	0.0452832	0	0.128599	0.563604	0.2482	5.41649	4.81235	2.03677	1.96784	1.91037	1.03604	3.16558	2.32529	0.86008	1.14725	0.488039	0.5907	3.38139	2.60425	0.942853	1.12227	0.586449	1.24007	1.57352	4.16041	0.353731	0.442977	9.09703	5.80262
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00060763 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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