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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00053456 ID=TCONS_00053456|Name=TCONS_00053456|organism=Clytia hemisphaerica|type=transcript|length=1119bp
ACTGTGTTTAACTTCTTATGAtattttatgTATATTAAATCAATCTAGAA
AATGGCAGATGATAAAGAGGTTTTACGAGAAATATGGGAAGGGAGACTTC
CTGTATGTTTTAGCCTCAGCCCTGATGACGTCACAACAGTTGAACCACCA
GAGCCATGCTATCTTTTAGTTCCACGTATGACCTATTTTCCCCTTGTGAC
TGACAAGGTTTTTCGTCATTTCCAAAAGGCTAGCAACCAAGACAATATTG
ATGACATGTGGCTTGAGTTTGATGGCCAACCTTTAAAATGGCATCTTCCC
ATCGGAGCTTTATTTGACCTTTATGGTCCAGAAACACTTCCCTGGAACAT
TACTGTTCATTTTAAGAGATTCCCAGAAAAAGAGATTTTGAAATGTGATG
GGCGTGAAACTGTAGAGGCCAATTATATGTCAGCAGTCAAAGAAGCAGAT
AGTTTAAAGCACCGTTCTTATGTCATGAATAGTATGAAGAAAAATGATCA
CAAACAATTATGGCTTGGTCTTTCCAATGATAAGTTTGATCAATTCTGGT
CTGTCAACAAAAGGCTGATGGAAAGGGTCAATAGTGAACCATTTCGTTAC
GTCCCGCTGCGTATTCATTTATCAGATGGTACAATGTTGCAGAAGCTATT
CAAAACAGTATCAGATCAATCTGAACTTCATACTTTTGGTGAACTGCTTC
ATCATTGTATTCCCTACGTGATGGCAAACGAAAACAACAAAACAGAATTG
GCTCATGGATGGAAAATTTTGGTTCAAGGTTTGACACCACCTCTGGTGAC
ACCTGTCCAATGGATGAGTGAACATTTGAGTTACCCCGATAATTTCTTAC
ATATTATCGTTTTACAAGCTTGATTTTGTCGTTGATTTGTCATAAAATAA
AATGCATTcttactgtaatttttttgttatctTTTCTATTAAGCATCATC
TCGAGTTAAAATAGGCAAGGTTAAAATGttttctgctattttttgtaatg
CTATAATAGGGCTTTTGAAATTTATGAATTAAatctattttatatttttg
taaataacattaaaattaccttttttcttataaaaaattcttcGATATCA
AATATATGTCTTTTTATTT Run BLAST on NCBI transcript from alignment at scaffold_231:204271..216037- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00053456 ID=TCONS_00053456|Name=TCONS_00053456|organism=Clytia hemisphaerica|type=transcript|length=11767bp|location=Sequence derived from alignment at scaffold_231:204271..216037- (Clytia hemisphaerica)
ACTGTGTTTAACTTCTTATGATATTTTATGGTAAGTTGATTATGTGCATT
GTCTTGGATTGTTCAGGATTGTTTTTGCATTTTCGATTGTTTTTGTTTGT
ATCAAAAACTGATAAACCACTAAAAATTATTGCTACCGAGCTACCGAGAG
ATCAGCCAGGTACACGTTTTTTTTTAGTTCTACCAAGCAGCCTCAATGTT
CCTTAAGAAATCGGCCTTTTGAGCCTTAAATGTTTCTTACATGTTTCCAA
ACTTTGTCAAGCTTAAAGGATGCATGCCGATAATGCAATAGTCTAATTGA
CTAATCTACCGACGCACCGGATTGTCTGGTGGGGGCACTGTCACCGGTTG
CCGGGCTACGGGCCGCGAAAGGTACGCTGCGGGGCCTTCCCGTAAGGACG
ATTGCCGGGCCGTCCGGCGTTTTCAGCCTGTCAAACGGTGTATTTGTCTG
GTGGCAAAAAAATATCCTTTTGCTACACCGGACGCAATAAGTCCGGTGTC
AGACTGTGTTGCATACAGGGAATTTTGGACGCCGGATATTTATGAAACAA
CATATATATTAAGAAACACCAGATGCACCGGACTGGTCATGTTTTGATTA
TCCGGTGTGAAAAATATCCTTCTCCGACACCGGACATTTCGCGTGTCCAG
TGTTCATTAACTCTGGTGCGGTCCTGGCATTCTTAGCCTCATGTTTTTTA
AAAGTGTGTTTCTTAAAAAAACAAAACGTGTAACTTGCATCAGTGGAGGC
TAACATGCATAGCCCTCAAATGAATGACCAATCAAAGCAGCAAAATTTCA
AAACAAAGGAACTACCGTAGGTCGGGGAAACTTCGGAATGAAGGAAACTT
CGGACTAAAATCTTTAACAAGTGATTACTTCGCGAGGATTTAACATTTTA
TCGTACTTTTTTCTTTCACAGTTCAGAAATGAAGTACACTCGACGATACA
TATCAAGCGACGGAACGCCGAAAGAAGAACGAAGAAGAAATTGAAGAAAA
CCGCGATATTTTACCATCTTCCATTGTAAAGAGATTTGTTGGATATCTAA
GGCAGCGACCTCATAATTTTATTTACGTGATGAAACGAGGAGACATTGAA
TGTCACGTTAAAAGTTATTTGGGCTAAAAATATGCATTCCTCAATCTTCA
ATAACTCATCAAAGTTTCTCCATAAATTCGCCGAGAAAGTCGCTGCGAAA
ATGGCTTTACCGTCAGCCGAGAAAGATCTTCTTTAAGCGAATCCCAAGAG
AAACATAAAGTGATTTCGAAGCAATTATAAGAACTTTGTTCTGACGTCAC
CAGACATTGATGATAAACGTGCAGATAATTTGGTGCTCTATTTTTTATAA
AGTAAGGTAAAGGGAAAACCCTATTTTTATTAGAAGTCGATGATGGTGGA
TTTTCTTTATTAGAACATTACATTAGAATATGTCAAACAATTCTTGGAAA
ATGCTTGCTTGTAAGTCACCATCTGATCCACATGATATGTTGGATGAAAA
TTCTAATGAGTCAAATATGAAATTATCGTAACTAATTAAAGAGCCTGAAC
ACGTATTCTCCAGGGGAATAAGGCGGGTCCGTGGAGGTCAAAATTCTTGC
AACGTTACAAATCATTTTAATAAGCTCATTTTAGGCTCAAACGAAGCGTA
TAACCAAGTAAAATAAGATCCAGTCTAGGCAGATGTTTTTTTATCTAGAA
ATTTTGCGTAATTCGCAAAAATTTTCAATTTTGCGATATTTTAATGACGT
CATAAAAATTGAAATTCCAATAACTTTTGATAGAATCGTCAAAATAATTT
CAAATTTTCACCAAAGATGCATTCCGAGGTAAATTTTCAAAAGATTTCAA
AAAAATTTTAAAATCTTGATGACGTCAGCATTTTTCAACGATTTTAGTTT
TTTGGCCGAAAAGTGATGACGTCATCAAATTTCGATGAAATTTTTGTCTA
ATTCTGAAAACATTAATAATATGCATCTTTGGTAAANAATTTCGATGAAA
TTTTTGTCTAATTCTGAAAACATTAATAATATGCATCTTAGGTAAAAATT
TGAAATTATTCTGATAATTCTATCAAAAGTTATTGGAATTTCAATTGTTA
TGACGTCATCAAAATAGCGCAAAATTGAAGATTTTTGCGAATTACGCAAA
ATTTCAAAATGAAAAAACATCTGCCTAGACTGAATCTTATTCTACTTAGT
CATACGCTTCGTTTGAGCCCAAAATGAGCTTCTGAAATTGATTTGTAACG
TTGCAAGCATTTTGACCCCGCCTTAATCCCCTGGAGTTTGTCATGCTCTT
TCCATGGTGCTGTGACAATAGTGCATGTCTACTGAAAATATTGTCTCGCC
ATACAGCCCTGTCTCAAAGATTGATTTTGCATTGTGGTATTCCGTAGAAT
CTCTTTCTTTCTTTTATGACCTACTTTAGGCTTATAAACTTTAGCGAGCA
GAAACTTTTGCACTTTTCGCGAATTTGGTCTTTTCGCGAGATTTGATGTC
TTTGAAATTTCTCTTTCAGGCCATTCGCGAAAGTTTATGCAGACGAAATA
TTTTTGACAAAATAGAAAATCTGTAAAAAGCTGTAATAAATATAAAATTC
ACATAGACTACTTTAGGCGTAGAAACTTTCGCGGGCAGAAACTTTCGCAA
TTTTCGGCCCTTTTCACGACAGTAAATGTCTTTAAAAATTCTAGGAAGGG
CCATTCGCGAAAGTTTATGCTTGCGAAATATTCTTGACAAAATAGAAAAT
CTGTAAAACTTCAAACTTTGAATAAAATGTAACTTTTATGACACTTTTTA
GCCTGCTAAAAGACTAAAAAGTCAAAAGACAAATGTTTCAAGCCAATCCA
AGAAGTATTTGTCCCTTTAATAAGCCATTCTTTGTGTAAAAATTTTAAAT
TCAACGATTCGTGAAAGTTTGTCTTAAACTTTGCGCTCTTTCAGTCTCGC
AAAACTTTGTGCTCGTTTGTACGCCTAAAGTGATCAGTGATTTCACCAGA
TCCAGGTGTCGAATTTCTCCAAAATAAGGATAATTTGTCTATTGTGGCTT
TGATGTGAAAAGTACTCCTAAGTTATTATCATTCAGCCCCTTAACGATAG
CTAGTTGGTTAAACATTTTTATCATCTCGGTAGTTGAGACAGGGGTGTTT
CCACTTTCCACTAAATGCCTGTGATGGAAATTTTTATCCGCTTTGTTGGA
AAAAATTCCACCGGGGCCGCTGTAAGATAGGGGTGTCTTATTTAAAGTAG
GGTAAGACGAGGGGTAAGACATTTATATACAGCGGTAATGAAACAGAATT
AGATACAATATTATGTTTCTACCATTGAAGTTATGTTTTTACTTACTCGG
TAGGTATTTTGCATTTATTTCTTTTGCTCTCTTTTTGATCTAATCTATGA
AACCTGCATCGACGAACTTGTGAACCACCCGTACGACCCGTAGTCCCACT
GGTAACAAAATATTTAATTCGTATTTAATTCGCGATTTACAGTACGCGTT
TTGTTCCAATTTCTTTCACTTCTAAGACATGAATTATTATTTTTGACCAT
GATCTTGATCGTGCTAACTTCCTCGCACATCATCCGATCCATCTGGTACA
TCGTTGGTGCTGTCGTCGAACAATCATCTAATTCAAAATTGTAGTCTACT
ACGTCTACAGTAACTCAAGTTATTTAAAACGATATTTTTAGCAAACATTG
AATTTCACTTGATACTTGTATAAAACACCTATTTGTCCACAGTGATAGCT
TTTTGCTGATTTGATTCTGATTTCATAGGAACTACTAAAGTACATGTATT
TAAAGTACGCTACAGCCCCTATTATTGGATAAATACAGGAATCAAAACTG
AACTCTCATATTGCGAAAAATAAAATTTGAAACAGTTTTTTCACGATGAA
CATTTAGCTCTCTCGCTTATATGTCTATAACACCCATGTTTCACACAGCC
CCGGTGGAACTTCAGGCAAAACAACAGGGTTGAAATTTTCTATCGAAATT
GGATTTGAATTCTATTGTTCTCTCATAAATTCTGTTGGGGTCGTTTGAAA
TGTTTTTTTTCAAGTTCCTAATGAGGTTGAAATTGAAAAAAGATGTTTCC
ACACCGGGTACGAAATCTCACGGCCCAATTTTTCAAGTGGAGCGCGAGTT
GACACAAGGGTTGTTATCTTTATTTGAAAACCGGAAAGTTTATGTGCTTC
CGAAAAAAAATAATACCCAGAACTTAGGATCCGATGGTCCCGCGAAAAAT
AAGAAAAATATCTAATGAAATATAACGATATGATAATAACATAAGGAAAG
GAGACAGTCTAATTGAAAAAGTTCTTATAAAACATGTTTGTTTCACCAAT
TTACTCTGAGGAAGACCCGCTCTCATCATTTTTAGCGTCCATAAAAAGTT
ACGTGCAAAAACTAATGATCGGTTGACGAGTTTTATTATTCACACTTCCA
TCGCACGCCCAGAAAATTAATGACCAATTTAAACGCAATTCGTATCTTTA
TGTCGTTAATTTCTCGGCTCACACGAATTTGTCTCTTGGTATTTTTCAAC
AAATAGCACTTCAAATTCAATGTTTTTGTTTTGAAATGGCGCAGCATCCA
GTCATGATGGTAGATCGTTGCAGTGACGGCAATTCATTCCGAAGTTTAAC
ATTTTACGAAGTTAACCTTTCTGAACTTGAGATGGTGTTTCTTTCATAAT
GACCTGGCGGATTTACTTGTAACGTTTGTTTTCNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNAGAAATCTAAAGGGCACCTAGGCCAGGTTAGGGGTTGGGGGC
TAATATTTTGCAATTCTTTGGGGTTACCTATTAATTGGGGGTACCTAGGC
GAACCCGAAAAAAATTTTTGTTTCCGGTCCACCGATGACGAAAACAACAC
TCACCCGGCCGGCCGCAAAATAATAGAAGTTAAAATGATGGTCTTCTTTA
CCTTAAATCTGTAGTAACTTGACATAAATACAGGCTTTGGCATAAGAAAA
ATTCACGTGATCATTGCACGCCTAGATTTTGATTTATAGTGGTCTTCTAG
GTGTGCGATTATTCTTAAATACTTAATTTTCATCGTTTATATTTTCAATT
GTGTTACAATATCTCTAAGAACTGGACACTCTCTTTCATTTGGAATATTT
ATCTTATATAATATAATAAAGCTTTACAGGTTTGCAGGCCACCGTGAAGA
CACATGGGCCTCTATAAACCGCTCGTACTTTTTACAATGATCTTTTTGAA
ATAGAGTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNTCTTCAATTGCTAAAGGCTCCAAACTGTGATTACGAAGGG
ATATGAAGGGAACTTTTTTGAGAAAAAAGTAGTGAGAGAGACATTTCCCC
AATTTTTTAAATCCTCACTTTATGAATGTTTCTTTTTATTTTACTCACAA
GTCAGCATAATTCCTTTTATAAAAACAAAGCTGTTTACTTACTGAAAATT
CCCCACTTTGTGAATGTTTCTATTTGTTTTACTCACAAATCAGAGCATGA
TTCTTCTATAAAAACCAAGTATATTTAAAAAAAAAGGTTCTTAAAAGTTG
AGTTGCAAGCAAGAATTAACAAAAACAATGCATGGTTTAGTTTGAGATGA
ATAAAATTTCATTTCTATAACAATGATCAGGATAAAACCTTCATTCCAAA
TGATTTCTAGGCGTGCATTTTACAGCAGAATATAAAATATCACGTGTGAT
AAATCAAAGTTTTTCAAACAAACAAACTAACCCTAACCCTAACAATGATG
TACGAAAAAAAATGTGGTTGGGTGACGACAAAGTAAATTTTCATCCGGCC
GGTGGACTGGAAACAAAAATTTTTTTCGGGTTCCCCCTAGCTGTTTTGAT
GGAGGCTCTTTGGGGTGTGTATATTTTTTAAATTGAATATCAAAATTTTC
AAATTATTCAGTTTTTTTACCCCAGCACCCAGTTTCCCCATTCGATTCTC
TTGTTTCTTTTGTTTCCCATCACGTCATCTTTTGCTATATTTTTCAAATG
TGATTGTTTTTATACATTCTGATAAATAACGAGATTGCTCACGGGAATTT
CTAACCCGCGCGAGCAATCCCACATCTGTCAATCATCTTTTAGACCTGTC
AATCATTTTTTAGCAGCATTTTCTTTCAGTTTTGCTTTTCTTTTCACTTG
TGGTTCTGAAAAAAGTGTTTGTAAGATAATAAAAAAAGACAAAAGTCAAT
TTTTATGCATTTTTTTTAGTTAAAAGTTTTGGAATACTGGTTTTTCAAGA
GAAGGGAAAGGCATGACTCTTTGACTCTCATCACGCTAACCAACCTGATC
CATTTTGAAATACTGTACTTGAGTCAAACTGCATTGAGGCATGGTTTCTG
CCTACTCTTTCAGTCCCCCCTTAAAATGCAATTTTACCCTTAAAAGTAAA
GAAAATTCTCCCCTTAAATCGAACAAAAATTACTGGTACCCATTGTTAGA
ATGTCCCCACTTAAAATGAAAAAAAAAGAGGAATCCCCCTCAGATTTTTA
ATTTTTAGACTTTGACAATAACAAAGTACAACGATTGGTTTGATATCAAT
GCCATCAACATTATATTAGGTACATAATGATATCTAACTAAATAAAATTC
AATAAAAAGAAATCATTGAAAATAAACTGGATCCTATAATCAAATGATAC
AGATAAAACTTTTTATGAATAAAACCAAACAAAAGATGAAGTACCTGGTA
CAACAGTTGTGTTTTGTTCATATCTTAGGCCTTGTAAATTATCTTTATCA
TTAGATTTGAACTGGGAATGTTTTCTGATTGTAGTCCTAGTTTAAGTTAG
GTCGAGTAAGTGGTCTTCCCAAGTAGAGAATTTAGACTGTAAAACACAAA
GTAAGATTTCATGCTTATGACATTGATTTTGTATGTGACAGAGCTGAAAA
TGTCAAAGATCATTAATGCCAAAGATCATTCTAATGTACATAACTTTCAA
TATAGCATGGTCTGCAAAATAGTGGGCATGAGATTGTGAGCACAAAAACG
GGAAAGAAGATATTATTAGACAAATAAAATTATTATCAATAAAACCAAAT
ATTTTAGTCCCCCCTTTTTTCTTATTTTGATAGATTCTTGCAGCCCTTGA
TAAAGAATCCCCCCTTAAAAAAATGACAAAAATCCCCCCTTTTTTAAAAG
GCAATTTTTTGACCCCCCCTTATTTTAAGGGGGGGGGGCAGAAACCATGC
TGAGGTGACACTACTAAAATTATAACAGAAATATATCAATACGAGCTCAT
AAAACCAGAAAAGTTTTGTCAATGCTGACAAAATAACACTAACTTCAACG
CACCGTATAGGATTCGAACTCTCAAAAACAATTTTCTGAATCATGTCATC
TTATCCACTTGGCCGCTGTGAGAAGTAGTTAAATGAAAATCAATGATTAA
GAGTACCATATCTTTATTTGCCATGACCTGTATAATTTTATTTACCATGT
CAAGGTATTAACTTCTTAAACAAATGATTTTAGATCGTTTCGAACATGCG
GGAGCCGATCACTCGTCGAGATTTTCAGGACTCTTTAGTTGAAGAGTGAC
TCTTCTTGATACTTATTCCAATTCTGTAAGGGGACTGTAGCAAACGGACT
GTAAACCCTGCTAGTGCCTATAAAATTAGAAATTCCATCTAGGGGGTAAG
GACACTCTCCAATCTCGTTTAAAGTCTCAAAAGACTGAAAAAGGAGCTTT
TTCTTGCATACAGTACCCATATACAGCAGACAGAATTCACAGAGCGTACA
CGCGCAGGCGATCAAATACGATCGCGCAAAATGCGGGTCAAAAATTCCCG
TGAGCAATCTCGTTATTTATCAAAAAGTCTTTATAGCCGCCATCTTTATA
GCATAAAAACAAAGCTTTTCTCATACAAGTGCGCTTCTCATGCTAGCATA
GAGAAGCTAAAACCTCAGGATAAGAGTAAGCAAACATGACAGCAAGTTGT
GTTTTTGGCTCTGTTTAACTGTTTAACACTCACACTTATAACTGATTACA
ATCTTCTGGTATACAAAAGAACAAAAAGTGTCAATTCAAAAAAATTATCG
GCTGAATGGGGGTACCTAACTCAAAGCAATTTCTCAAGGGGACCTAACTC
GTCTGGGGCACCATGCTTCAATGGGGGCACCTGAAAAGTGGGCTGAAACC
ATGAACTATTTTTGTTTGCTTAGCAAACAGAGTGGAAAAAATCTTTAGTC
TATCAGTGCTTCCTATTATTCCTATTTTTAAATACAGAAAAAAAGGAGTC
GAAATTAAAGATAGAGAGGGATGTCGACATTAGACCAACTTACGTAGCCT
GTCTTATTTGAGGGCATTTATATTTGCACTTGGGTTTTGGAAATTAGATC
GTTTGTCTGATATACTGAGCTTAACAGTTGAAAATGATGTTTTCAACAGG
GTATCCTTTAGTTCTTATTTCATCAACAACTCTTGCAGTTAAAATACCTT
TCCTCACAAAATAGGCCCAAAATGAAATGTAAAAATTTTCGGTGACAGTA
TATATTTAGAGTTAATTGTGTCCAGTATTCCGGTAGTTTGTGAAAAAATT
GCCGGTATTTGGTATTCAGTACCCCTTGAAACCCCCCCCCCCCCCTTNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCCCCCCCCCCATTAGATGC
TGTTTTAGAGCTTTAGAGCCTGATTGATAGGTTACCTTTTTTTCTAGTAA
AGCATTATTTGTTTATTATTTGTTCATTACTCTTGGCAGTCAATTTTATG
TTTTATATAATCATTTAGTAAATAAGATTTTTTTAACAAAATTGGCAAAA
TTTTTACTTTTGTTGTCTTGTTTGTATTCATTTTCTTTGGGATTATTGAG
ATCTTTGTAGTTTTAATGATTCTGGAAAAATGTAATTAGTTTGCGAGTCA
TTACAGTAAATAAAGAAGTATCAAATCACGAAAATGTACGTAATGTATTA
TGTGATAATTCAATAGAATAGAACTAGTAAGTCGTGATATAAGGAGCGGA
GAAAGTGTGGAGAGAAGTTTATTTTAAGATTCACACCTTGTTCGGAAACT
ACATTTATATAATAAAGAAGGTTTAGCTGCCACTAGTGGAGAAGACATCT
TTCACCTTGTCTGATGATGCTAGATGAATCTATTGAATCGTAATAAACTT
CTAAATTCGAATATCACTGGTCCGATAATACTGATAATGTTTGAAATTTT
TCCTCCTAAAGATCTGTTTGAATTTATGGTTTTTGAGCAAACTTTTCATT
GTTTTTCATTTATCCATCTTCATTTTAGTATATTAAATCAATCTAGAAAA
TGGCAGATGATAAAGAGGTTTTACGAGAAATATGGGAAGGGAGACTTCCT
GTATGTTTTAGCCTCAGCCCTGATGACGTCACAACAGTTGAACCACCAGA
GCCATGCTATCTTTTAGTTCCACGTATGACCTATTTTCCCCTTGTGACTG
ACAAGGTTTTTCGTCATTTCCAAAAGGCTAGCAACCAAGACAATATTGAT
GACATGTGGCTTGAGTTTGATGGCCAACCTTTAAAATGGCATCTTCCCAT
CGGAGCTTTATTTGACCTTTATGGTCCAGAAACACTTCCCTGGAACATTA
CTGTTCATTTTAAGAGATTCCCAGAAAAAGAGATTTTGAAATGTGATGGG
CGTGAAACTGTAGAGGCCAATTATATGTCAGCAGTCAAAGAAGCAGATAG
TTTAAAGCACCGTTCTTATGTCATGAATAGTATGAAGAAAAATGATCACA
AACAATTATGGCTTGGTCTTTCCAATGATAAGTTTGATCAATTCTGGTCT
GTCAACAAAAGGCTGATGGAAAGGGTCAATAGTGAACCATTTCGTTACGT
CCCGCTGCGTATTCATTTATCAGATGGTACAATGTTGCAGAAGCTATTCA
AAACAGTATCAGATCAATCTGAACTTCATACTTTTGGTGAACTGCTTCAT
CATTGTATTCCCTACGTGATGGCAAACGAAAACAACAAAACAGAATTGGC
TCATGGATGGAAAATTTTGGTTCAAGGTTTGACACCACCTCTGGTGACAC
CTGTCCAATGGATGAGTGAACATTTGAGTTACCCCGATAATTTCTTACAT
ATTATCGTTTTACAAGCTTGATTTTGTCGTTGATTTGTCATAAAATAAAA
TGCATTCTTACTGTAATTTTTTTGTTATCTTTTCTATTAAGCATCATCTC
GAGTTAAAATAGGCAAGGTTAAAATGTTTTCTGCTATTTTTTGTAATGCT
ATAATAGGGCTTTTGAAATTTATGAATTAAATCTATTTTATATTTTTGTA
AATAACATTAAAATTACCTTTTTTCTTATAAAAAATTCTTCGATATCAAA
TATATGTCTTTTTATTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00053456-exon-scaffold_231-1575043694:216008..216037 | TCONS_00053456-exon-scaffold_231-1575043694:216008..216037 | Clytia hemisphaerica | exon |
| TCONS_00053456-exon-scaffold_231-1575043694:204271..205359 | TCONS_00053456-exon-scaffold_231-1575043694:204271..205359 | Clytia hemisphaerica | exon |
| TCONS_00053456-exon-scaffold_231-1510915933:216008..216037 | TCONS_00053456-exon-scaffold_231-1510915933:216008..216037 | Clytia hemisphaerica | exon |
| TCONS_00053456-exon-scaffold_231-1510915933:204271..205359 | TCONS_00053456-exon-scaffold_231-1510915933:204271..205359 | Clytia hemisphaerica | exon |
| TCONS_00053456-exon-scaffold_231-1491911889:216008..216037 | TCONS_00053456-exon-scaffold_231-1491911889:216008..216037 | Clytia hemisphaerica | exon |
| TCONS_00053456-exon-scaffold_231-1491911889:204271..205359 | TCONS_00053456-exon-scaffold_231-1491911889:204271..205359 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_231 | supercontig | scaffold_231:204271..216037 - |
Blast
BLAST of TCONS_00053456 vs. Swiss-Prot (Human)
Match: ATG5 (Autophagy protein 5 OS=Homo sapiens GN=ATG5 PE=1 SV=2) HSP 1 Score: 304.294 bits (778), Expect = 4.352e-101 Identity = 143/275 (52.00%), Postives = 201/275 (73.09%), Query Frame = 1
Query: 52 MADDKEVLREIWEGRLPVCFSLSPDDVTTVEPPEPCYLLVPRMTYFPLVTDKVFRHFQKASNQDNIDDMWLEFDGQPLKWHLPIGALFDLYGPET-LPWNITVHFKRFPEKEILKCDGRETVEANYMSAVKEADSLKHRSYVMNSMKKNDHKQLWLGLSNDKFDQFWSVNKRLMERVNSE-PFRYVPLRIH--LSDGTMLQKLFKTVSDQSELHTFGELLHHCIPYVMANENNKTELAHGWKILVQGLTPPLVTPVQWMSEHLSYPDNFLHIIVL 864
M DDK+VLR++W GR+P CF+L D++T E EP YLL+PR++Y LVTDKV +HFQK Q++I ++W E++G PLKWH PIG LFDL + LPWNITVHFK FPEK++L C ++ +EA++MS +KEAD+LKH+S V+N M+K DHKQLW+GL ND+FDQFW++N++LME E FRY+P RI+ ++ +QKLF+ V+ +LHT G+LL P + E+ + + ++++ G+ P L TP+QW+SEHLSYPDNFLHI ++
Sbjct: 1 MTDDKDVLRDVWFGRIPTCFTLYQDEITEREA-EPYYLLLPRVSYLTLVTDKVKKHFQKVMRQEDISEIWFEYEGTPLKWHYPIGLLFDLLASSSALPWNITVHFKSFPEKDLLHCPSKDAIEAHFMSCMKEADALKHKSQVINEMQKKDHKQLWMGLQNDRFDQFWAINRKLMEYPAEENGFRYIPFRIYQTTTERPFIQKLFRPVAADGQLHTLGDLLKEVCPSAIDPEDGEKKN----QVMIHGIEPMLETPLQWLSEHLSYPDNFLHISII 270
The following BLAST results are available for this feature:
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