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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000003:3840499..3844756+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg00780.3 ID=Blg00780.3|Name=Blg00780.3|organism=Branchiostoma lanceolatum|type=mRNA|length=4258bp|location=Sequence derived from alignment at Sc0000003:3840499..3844756+ (Branchiostoma lanceolatum)
CGAACAAGTCTGTCGCGCGGCTCTGATTCCGTGCAAGATCACATACAGAA
ATGGACCTCCAAAAGGCTACGGAAGGTAAGACGACAAAAGATTTCTTGAG
AACTAAAATATGTACAGGCCTCGCATAGAACTTTTAACGTGGATAATGAA
GTTTGGCTGTGGTATACAACTTTATTCAAGCAGGTCGCGCTCGTCAGGCC
ATGAAATTTACAAGTTTGAAAATATCAGTGTTACTGACGTTGAAAGCTAA
ATGTGTGGTACACTGTCTTTCTCGCTCTCACGATACAGTACAGGGTTTTA
CTTGATAAGTAACAATACATATAGTACGTACTATGTACTTACTTACATTT
ATTACATGGCCATATATCATGTGTATCAAGTGGTAGTGTACAGTCACAAT
GGTTGTGGTTACTGGATTATATTGTCTTTTATGTCCCCAAGTCAATCGCA
GTAGGTAGTCGGGAAGTCCGCATTTCCCTTTATCTTTTGACTTTGTGCAT
GATTACGTCATGTACTGAGGGGGTGGGCGGGGATTGGAAAGGTGATCGCA
CTCTAGCAGCAGCCATTTGAGATCTGGCTGGCAACTTGCCAAGTTCAACC
GCGGTTTGTGCCTGGTGAGACTTCGTGCCTCGTGAAACATCGTTCAACTT
CGTATGGTGACGTCAGCTGGGGAATCCCCTTATTACCATAGCGTAGGGAC
CGATTTCTCCGGCGGGCCATTCTATTACATTTTTTTGGTGGTGGTAGCAT
TTTTATTAGTTCTCAGATCATGGCCACGTTTTGATACTAAACTTTTAAAC
TTCAAAACATTAGCAAACTAAAAAGCTGGGTAGTGTTTCACAGGTTTGGG
GCCAGCAATGCTGGACAAATTCGACATTTTCTTTTCTGGTCCCCCTCCCT
TATATTTGGGTGGTACCGCCCGTCCCCACGGTGGCCCGTCCCTGAGGAAA
CCCATGAAGCCGTACGCTACATAAACTGAGTCCTGTTGTATTCTGCTCTG
ATTCCGTACAAGATCACATACAGAAATGGACCTCCAAAGTGCTGCACAAG
GTGAGAAGACACAAGATTTCTTGAGAACTAGTGTTTGATATGTATAGGCC
TCACATGGAACTTTTAACGTTGTTTATTGCTAGTTGACTGGCTCAGACTG
TCACAGGCCTGTAGTCGCTATACTATAGGGAAAATGATTCGCCAGGAGAG
TTTGTAGGAGAGTTGGGACACTTTTCAGTGGGACACTATGAGTCACCGCG
GCCGGACTGACACTCAGACCGACAATCGTTCACATAGTATTTCTNGACAA
TCGTTCACACAGTATTTCTGCCGAATTCCACTATCCGTACGTACATTTCC
TTTTACATTCCTGTTAACTTTCATGGGCAAACACTGAATTCTTTACCTGA
CACCAGCCTACCGTGAGCTTCCCGGGATCTCCTCGGTGCCGGGAGGGTCG
ACGGCCCGCCGAGCCGAGGTCTATCAGCGCGCTCCCGGGAAAATTCTACG
TCACGAGATTTGCGGCGCGACATATTTTTAAGTGTGAAAAGGAAATCTAG
CGTGTACAGTCAGCAGTATGATGGTCTATGTGTAACTGCCCCGTTTTGAT
AAACATTTCGCACCCTTTATGCAAACTGTCTAGAAAACAGTGACAGTAAC
ATTTATTGCACGATAAGTGGCCTGGTCAGATCCTGAGGACCACGTCGGTG
CCCTAAGCGATTTCAGGGGGTAGAACTTGAAATATTCTGGGGAAAACAAT
TCTGTTTTGTGAGGTTGAAATTGACATTTGCTTCCCCATTTTAGCACATC
TGCATCATTATTTCAGACTTTGGGCATTTAAAAATAGCACAGAAGCAAGC
CACAAAAGGAGTATTGTATTTATTGGGTCCCCCAAAAAATCAGCCCAGAA
TCCAGCCGTAACCGTTTTCTGTCGACAATTTTCGGTAACATCCGGCCGCG
TGACGTCACAATGCCCGAGGACAATGAGCCATGACCACGTGCACAGAAGC
AAGCCACAAAAGGAGTATTGTATTTATTGGGTCCCCCAAAAAATCAGCCC
AGAATCCAGCCGTAACCGTTTTCTGTCGACAATTTTCGGTAACATCCGGC
CGCGTGACGTCACAATGCCCGAGGACAATGAGCCATGACCACGTGATTAT
TTCTTCGGATGCGTTCGGGACTTATCGGTCAGAATCGTGCATGTTCGGAA
GATTTGAAATGATGGCTGGCCTCCAAGTGCTCAGATTTTCAATGAGTTCC
CACCACACAGACATCACATTTTTGCTCCATGATGGTCGATATGTGATGGT
TTAGTGTTACCTAAACTTACTATGGCTAGAAATCAGGAAAAAATTGATTT
TGAATATATGACTTTCAGCGCCCTAATATTGCTTAGGTTGCCTTTAACTT
CCGGTAAAATATCTACTTTCCGCACTGCCTCTCACCTGTCGTATTTACGT
ACACCTTACCGGCTTTGTTTTGCGCACCGTCCAATCAGCGCCCCGTGTTC
TCTGTCAGAGGTCTGCCATTGGCTGGCGGTGCGAAGTTTACGCCACGCAA
GGTCACGTCGTACAAGCGCGCTTAAGTTGATCAAAGGCAAACATTTTTGA
AATGCTGTACAGTATTTCAGCACATATTTTGTCACACAAATCGACAGTTG
TTATCACTTAGGTGTTTTGTAGGAGCAGAGTCCCCGTACTGTACATGCAC
GTAATGATATATTGATGTAAATTGAGCAACAACCTGTGCTGACGAAACTT
CCCCTGTCGTTCCAGGCTTCAGCATGACCCGTGTGTTAAACAGACTGGCC
GGGGAGGTCGGGTCTCGGCAGTGGAAGAAAATCGCCAGAGAGATCGGACT
GACGGATCCGGAAATAGATGCCATTGAGGTAGGCTTCTCCCTCTTTCCTT
TTCTTTGCTTCTCTTCTCTTCTCTCTCTCACTTTTCCTCTCTCCTCTCTC
TCTCTTTCTCTACATGTAGCTCTCCCCTTTCTTTCTCTCTAAGCTGTTTC
TCAGTACCGTTAACGTTGTTACACATCCTAGGTGATATTTGACGACGCGT
CAAAGCCCTAATAAGCACTTTTACAGTATCACAATCGCGACACAGTTGTA
TGGTGAAGGAGATAAGCCTACCAACCTTTACCATTCATATTTTTTATCCC
CAGGAGTGCGAACGCACGAACCTGCACGAGAAGGTGTACCAGACGTTCCG
GCGGTGGAGGATGAAGAACGGCCGGCGGGCCACTCTGGACGCGCTGGCCG
GACATCTGCGCGCCGTCAAGATGGCTGCCCTGGCGGAAAAGCTGGAGGAT
CTCCGCAACAAAAACGCGTAAACCTCGTCACAAGGTTAGTTTGAATAATT
TTCGTGCTAAAAAAGGGAGACTACTAAAACATTACTTGGTATGAAATATT
AAGATTTTTCAAAACCCGTCACTAATCTTTTTGAATCATGCTTTATAATC
TTATGCTTGATGTCTTTACAATAGAAGTCATTTCATTACAATGAAATGGC
TTTAGGAATTAGTATCATTATTTTTTGTGCTCACCTTATATACATGTATT
TCTGTACAAAAATCCTGTTTATTACTAAGGTGAATTTTTTCATTCATTTC
AGATTTACATGAGCGTGCTGGAAATCCACCAGAATAGGGGGTCTGTCCTA
TAGCTATACTTTGATATTTCTCTGGCTCAGATTTGAGTTTGGTCAATTCT
TAGATTATGTAGCCATGGTGAATTCGTAGAAAACAGATTCTACCCAAACA
ACAAGTACAAGCTGCTTCTTTACCTGTTGTTATTTAGTGGCGTAATGGAA
AAAAAAAGTTGCGACCATATTTCTGCTTAGCAGAATCACAGATATAGATG
TGCTGAAAATATCTCGCGGTTGTGACTTACAAAAATCTATGCAAGGAGCG
TCAATTTTGATATCTCGAGCTAATGTTCATGACATACATGTACTCTCTCT
GCAGCGCATATATAGTGACCAACGGTTTGAAAATTCGAGGTTTTAATTGT
TCGCTGTTCTTGAATGGATATCTAACATTCTTTAAACGGGAAATTATGGT
AACAGGTTGTATATATTGTTCTCCCCAACTGTGTCACAGGTGATTGTATT
CCATGTTTTTCTATCGACGATTCTATTTCTATCTTGAAAAGATATTTGGC
TAAATCTTAATGTTAAATGGTGTATGGTTTACAACATTATGTTGTTCCAA
GAGGTTAAAAAACCTCCTTGCTTGTCCTGTGCAGAATATATTCTTACCAA
TATCTTGT Coding sequence (CDS) from alignment at Sc0000003:3840499..3844756+ >Blg00780.3 ID=Blg00780.3|Name=Blg00780.3|organism=Branchiostoma lanceolatum|type=CDS|length=306bp|location=Sequence derived from alignment at Sc0000003:3840499..3844756+ (Branchiostoma lanceolatum)
ATGGACCTCCAAAAGGCTACGGAAGGCTTCAGCATGACCCGTGTGTTAAA
CAGACTGGCCGGGGAGGTCGGGTCTCGGCAGTGGAAGAAAATCGCCAGAG
AGATCGGACTGACGGATCCGGAAATAGATGCCATTGAGGAGTGCGAACGC
ACGAACCTGCACGAGAAGGTGTACCAGACGTTCCGGCGGTGGAGGATGAA
GAACGGCCGGCGGGCCACTCTGGACGCGCTGGCCGGACATCTGCGCGCCG
TCAAGATGGCTGCCCTGGCGGAAAAGCTGGAGGATCTCCGCAACAAAAAC
GCGTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg00780.3-exon-Sc0000003-1570713199:3840499..3840573 | Blg00780.3-exon-Sc0000003-1570713199:3840499..3840573 | Branchiostoma lanceolatum | exon |
| Blg00780.3-exon-Sc0000003-1570713199:3843264..3843376 | Blg00780.3-exon-Sc0000003-1570713199:3843264..3843376 | Branchiostoma lanceolatum | exon |
| Blg00780.3-exon-Sc0000003-1570713199:3843652..3843832 | Blg00780.3-exon-Sc0000003-1570713199:3843652..3843832 | Branchiostoma lanceolatum | exon |
| Blg00780.3-exon-Sc0000003-1570713199:3844101..3844756 | Blg00780.3-exon-Sc0000003-1570713199:3844101..3844756 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000003 | genome | Sc0000003:3840499..3844756 + |
Properties
| Property Name | Value |
|---|
| GeneID | Blg00780 |
|
