|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000003:3608264..3612546+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg01012.3 ID=Blg01012.3|Name=Blg01012.3|organism=Branchiostoma lanceolatum|type=mRNA|length=4283bp|location=Sequence derived from alignment at Sc0000003:3608264..3612546+ (Branchiostoma lanceolatum)
ATAATAGGTGCAGTTATTGTTCTCGACTGTGCATACCACAGTTATAACCC
CGTGCAGGCGGTCTGAACTTAAAGTTTGTCGCTGTCTGAATCAGACGCAA
CAGATCTAAAAGAAGCCATCATGGATCAGAAACCTGAAATCAAAGTAAGT
GTATATTTTGTTTGTTTTCAGTACTGCGTCACAATCCAGCCGCACGTTCG
CTCGTCGTCACGTCGGTTGTGTAGAATCGTTGGCTTGGCGCCATTCTTTT
TAGTTTACCGGGCTCCTATACTCGCTCCCTCACTTGAGAGCCGGTAAATT
AAATATCAACAGGGTGGCATCCGGGCTAGTAGAATCACAGTGTCTATCTA
GCAGGCTAGCCGCCACATTATGATTTGTCCCACAAAAGACAGGGTAGGGG
GTTAAAAGCCACTAGGGATCTATGCGTTACAATAGAGGTTAAAAGTTGAC
ATACTCTTTGACGCTGTGCATATGTCAGCCGTCGCTTTCTATAGCTAGAC
AAATCTATTCCTTCCACAGTTATACCACCTAATTTAGATGATGTCTCAAC
CTGACTTATTATACACTCATTTAAGTCTCCTCACTACAAGCTGCCTTAGT
TTAAATTCACTTAAATTACCACAGCTTTCAGAAATTCAATTACAAAGTTT
TCGGGACTTTGAGTTATGTCTGACTACAGCTGGTTAACGTTACATCACAC
CTTGAAAGGAGCTAAATAAGAAGCAATATAATCTATTTTCAGACTGATAT
TTACAATAGGTAGCTAGCAGTTGAGAAGTATCTGTAGTATTTACTTGGTT
GTTTTTGTGAAAGATAGTCAAAAAGGGCGTGCACAAAAATTCATAGCTGC
TATTGTTCCACTGTTGTTGACAGATAGACCCAGAGGACAAGAAAACCGGA
AAGACCAGGTCCCAGCCTCGTTTCAGGCTCGCCGTGGGATTGGCTGTAGC
CTTGCTGCTTGTGACCTGCGCAGTGGCCGCTGGTGGACTGATGACGTACT
TCCGGGGGAAATGCGGACGTAAGGTAGAAAAACACAGTTTTCGCCTGCGG
GGATTTCTATAGACTATTAGTTGACTGATTGCCATCGATGCGGAATAAAT
TATAGTAGGGTACCCTAGAGAAGTACGATAAACGAATGTGTGGAAGTTGA
TGGCAAAATTTACAAAAACATTGAAAACAACTAACCATGCTATCTGTGAC
GTCAAAATATCATCCGCAAATCAAGTTCAACCATTCATTTCCCTAAACGC
GATTCAAAGGCTTTAAACAGTCATCTATTCCTGTTTTGGTCGCTGGAAAC
TTTTTTTTCCAAACAGATAGCAAAAATAAAAAACACACACAAACACACAG
TATTTATCCGCGACCCCCGGAGTCTTTGACATAGCGGCAAAAACGTCGCG
CCCCTAAATCTTGAACCGTACATATGTAAGCCCTTTAACGTGAAAGCCAG
CGAGACACGAACTTTATTGTATGGTAGTTTCGACCCATAAATGTGCGTGA
CCTTTACAGCTGATGGCCGGGGTGAGACGGCTGCACTTCCGCAAGACCCC
GCATGACTCCATTTAAATGTCGTCGTCAAAATGTATAATATGAAAATAAT
TATCGGTCTATTCAAAATAGAATTGAAACTACCGAAAATAATTTCATCAG
GTTGGTAGAATATAGGATATAGGAGATTCTTATTACACAACCAGGTAATC
TCACCTGCTAACATTTCGATGTCTGTTAGACACCTTCTTCAGAGCTTCTG
ACTGGAGTAACTGCTTCTCACCGCTATAAGTAGCCGATGTAGGTGGCGCT
TTTGCGGTGAGAACACTGTCCCAAAAGCGCCACCTACATTGGCTACTTAT
AGCGGTGAGAAGCAGTACTCCAGTCAGAAGCTCTGAAGAAGGTGTCTCAT
AGACATCGAAACGTCAGCAAGTGAGATTACCTGGTTATGAAAAAAGAATC
TCCTCGAATTGAAACTAATGTTGGCTAGATAGTGATTTCTAAATAAATGT
TGATTTTTTTTTGTTGTTGTTACTGTTGCACAAACAGTTCACCATTAAGG
CCTCCGTGAATGGTCAGACGTTCACAGAGGAGGTGGAAGTGGACCGGGAG
AACGGCATGGTGGTGTACCGGGATGACGTCAGTACTGAGGACGGGGAGAT
CATACAAACCAAAGAGGTAGAGCAAAGGATATGTTCTAGTAATACATAGG
TCTTAAAATTATATGAGTCTATTTTTGCACAAGAAAGTTTGTGTAACGCT
GCAATTAAACAATCAATGGGCAATGAATTGAAAAAAAATAATTTTTTTGT
CCTGAAAAAGCTAAGAGCCGCTCGAATACCGTTCAAATCAAACTTTAAAA
ACAGGTAACAACAAGTTTACAGCTCATATGCAATCTTATAGGGATAATTC
AAAGTTTAATTTGCTTCTTCACAGGGAGTAACTGTGCTCTACCGCCGAGG
TACCTGCTACGTGTTGGAGGACGAAAATAACAACCAAACAACCGACATCG
ATGTGGTAGAGGCTGCGACAGAGTCCTTAGCTGTGAGTTTAAATCTATGT
ATCTCGTAATTTTTTTTGTCTACTCGTTACCTAGAATATTACTTCCCACC
ATACCAAACTCATGATAGTGTTAGTGAGGTCGTATGGGTACGGCAGGGGT
TTCGGCCCAGAACTCAGCGTTCCCGGGTTCGACCCCCCCCCTTCCCCTCC
GCCCGACGCCACCGATGTTGTGCCCGTAGGAAAGTCACTGTACAGGATAT
TCCCTCACTCCATCCAGGTGTAAAAAGTGGGTATGATGTTTATGTACGTG
GCACTGTTAAGAGATGTTATGAAAAACTCAAGTGTGATGTCACGTCGTCC
TTGTCTGTCTTAAAGCGAAGTAAACAACAACAAAGAAATATAGTGTCTAT
CAAACCTTCTGTACCACAGAATGCCGGTGATGTTCCGAGTTTTGACGTTG
ACCGAGTCGTCTTCCTGAATCGGTCTGTTCCGGTTAGCCCTGAAGATGAC
GTCATCCTGCGAGCACAACTGCCACCCGTGTGTCGTGATGCTGCTCTGTA
CCGGGTACAAGAGGAGGACGCTGGAGGTAAGGTTACACATATTTAGCTTC
AGGTTATGCTGATAAATATTACTTTTGCAAGTATCCGCATACCAATCAAA
AAGAAGCAAGAACACTTACTAAGAAACTACCATGCTTGCCTACCACGTTT
TCGGAAGTCAAGAATTGACTTGCGTTAATTCAGCTCTATTGTCAACCAGC
ACACTCTGACTTTGGCTTTTAACTTTATTTGAGTTGCACCAACACAATGC
AACGTGGAGCACCAGGCAGTGAATGCTGGTATCGTGCACTACACATAATA
AAACATGTTCTATACAACTCCAAATACAAAGCAACAAATACAATATAACA
CAATTAGTACACTGTAACTACATGCCGCCTTGTAAAAAAGAACAATTAAT
CAATCATTTACTCAAATCCTTACATCAAATAACCAAAGGCATTACTATAT
CAATACTGGTCTGCAACAAGTCAAAATGATATAGGCGTCGAAGAACGTGA
ATAATTACAATCAAGATTCGACAGAAATTGATATTGTTCATGGATTTATC
TAGATTATTGGGGTCAAGAGCTGGACACTGAAGAAAGCACGGAGACATCA
TACAAAAGCCGTGTCAGACGACGTATACGATTTGGACCTGGTCGCGAGAA
TCTCCCAGATGGCTGTGCAAGGATAGGCTTCGATATCATTCATGGAGAAT
CTTGTTCGTATTCGTGCGGTGGGGGTCATTCTGTATGTCCTAACAAGTTT
ACGTGTGGGGGTCCGGATTACCATTGTACGTGTATACAATTACGTGGCTG
GTGGTGCTAGTAAACACGTAACACACAGCTTAGTATAACTGCCCCTTAAC
GTAACGCACCAGCTTCTGTCATCGGTATAGCCTGTATAGCTGTCGTTAAA
CGATCAATTTATTTATTGATAGTGATAGGAATATTGTTACTGTTTGTTTA
TCCGCTAATGGTCATAACTTTATTTCATGCTATTACTTCTTTACCAGCAA
GTGTTTTGTTATTATGGGTTGGGTGCATATGCATTGTGAATTTAGAACGT
TTGAATATGAGATAAAAGTAACCACGTTGGTTTCAATATAATAAAAAATG
TTTATATTTGCGTATTCCATTCAGATCTGTTAGAATTACAAAAAAATTCT
TCAATATCACAAACTAATGTCGAAAATATATCGCGGTGTTTTAGTGCGTT
AAGTACAGTGCATCGAGATTTGGTACATCGATA Coding sequence (CDS) from alignment at Sc0000003:3608264..3612546+ >Blg01012.3 ID=Blg01012.3|Name=Blg01012.3|organism=Branchiostoma lanceolatum|type=CDS|length=825bp|location=Sequence derived from alignment at Sc0000003:3608264..3612546+ (Branchiostoma lanceolatum)
ATGGATCAGAAACCTGAAATCAAAATAGACCCAGAGGACAAGAAAACCGG
AAAGACCAGGTCCCAGCCTCGTTTCAGGCTCGCCGTGGGATTGGCTGTAG
CCTTGCTGCTTGTGACCTGCGCAGTGGCCGCTGGTGGACTGATGACGTAC
TTCCGGGGGAAATGCGGACGTAAGTTCACCATTAAGGCCTCCGTGAATGG
TCAGACGTTCACAGAGGAGGTGGAAGTGGACCGGGAGAACGGCATGGTGG
TGTACCGGGATGACGTCAGTACTGAGGACGGGGAGATCATACAAACCAAA
GAGGGAGTAACTGTGCTCTACCGCCGAGGTACCTGCTACGTGTTGGAGGA
CGAAAATAACAACCAAACAACCGACATCGATGTGGTAGAGGCTGCGACAG
AGTCCTTAGCTAATGCCGGTGATGTTCCGAGTTTTGACGTTGACCGAGTC
GTCTTCCTGAATCGGTCTGTTCCGGTTAGCCCTGAAGATGACGTCATCCT
GCGAGCACAACTGCCACCCGTGTGTCGTGATGCTGCTCTGTACCGGGTAC
AAGAGGAGGACGCTGGAGATTATTGGGGTCAAGAGCTGGACACTGAAGAA
AGCACGGAGACATCATACAAAAGCCGTGTCAGACGACGTATACGATTTGG
ACCTGGTCGCGAGAATCTCCCAGATGGCTGTGCAAGGATAGGCTTCGATA
TCATTCATGGAGAATCTTGTTCGTATTCGTGCGGTGGGGGTCATTCTGTA
TGTCCTAACAAGTTTACGTGTGGGGGTCCGGATTACCATTGTACGTGTAT
ACAATTACGTGGCTGGTGGTGCTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg01012.3-exon-Sc0000003-1570713199:3608264..3608407 | Blg01012.3-exon-Sc0000003-1570713199:3608264..3608407 | Branchiostoma lanceolatum | exon |
| Blg01012.3-exon-Sc0000003-1570713199:3609137..3609286 | Blg01012.3-exon-Sc0000003-1570713199:3609137..3609286 | Branchiostoma lanceolatum | exon |
| Blg01012.3-exon-Sc0000003-1570713199:3610301..3610429 | Blg01012.3-exon-Sc0000003-1570713199:3610301..3610429 | Branchiostoma lanceolatum | exon |
| Blg01012.3-exon-Sc0000003-1570713199:3610688..3610795 | Blg01012.3-exon-Sc0000003-1570713199:3610688..3610795 | Branchiostoma lanceolatum | exon |
| Blg01012.3-exon-Sc0000003-1570713199:3611183..3611339 | Blg01012.3-exon-Sc0000003-1570713199:3611183..3611339 | Branchiostoma lanceolatum | exon |
| Blg01012.3-exon-Sc0000003-1570713199:3611867..3612546 | Blg01012.3-exon-Sc0000003-1570713199:3611867..3612546 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000003 | genome | Sc0000003:3608264..3612546 + |
Properties
| Property Name | Value |
|---|
| GeneID | Blg01012 |
|
