BlTCONS00062521 (mRNA) - B. lanceolatum

Overview
NameBlTCONS00062521
Unique NameBlTCONS00062521
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000049:1619440..1621211-

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>BlTCONS00062521 ID=BlTCONS00062521|Name=BlTCONS00062521|organism=Branchiostoma lanceolatum|type=mRNA|length=1772bp|location=Sequence derived from alignment at Sc0000049:1619440..1621211- (Branchiostoma lanceolatum)
GGGTGATGACGAATTTAAAACAGCTGCCAGCGAGCAGATCTGGACAGAGA TTATTCTGCAGAACCGATCCGGCATACGGTGAGTAAATGGGTTAGGTATA TATTCAATAGACATAAATCAAATCCAACGGAAACGTTTTCCGTCATTTGT CCCTGTTTTGTGTACACTAAAGGCTCGCGCTTGTCCTGTGAGGTCGTTAT CTGATATCCCACACTGGGATTACGCTTTTATTTGGAGGCGTCTGTTTGCC AAGTCCACTTCAGTCACATGAGTACAAATTTGGATCAAATGGCGACCGAC AACTCTTGACTCCTTTTATGCATGCAAAGTATGCTTCAGCTTGTTGTTAC GCACGATATGTAAGCTTGGCCTAATGTGTTTTATAAAACTTCCTTGGTTT TATTTAACATTGAACTCCGGCGACACAAACAATGTTTGTATAAATTCGTT ATGCACCTTATACATAATTGATTGTTAACTCAAAGGACACGAAGCATTTA GGTACCGTGCTGTTTAAGACAATTGTTAGTAAACAAGGGCGTGTATCGTA TAAAATGAGGTAGTGGGTGTATTCCTGTTGTAACATGTACCTTAATTAGC TTGTTTCCGCATGAGTCACTTCCTCTATAATGGTTTCATGGTGATTATGC AATTCCATCACGTAGTTGCGCAATCGTGTCTGTGGCAATACCTTATATGG GCCTCTTTCTTTTATGCAGCGTCACAGAAAAGAATTTGGCAGCAACCCTG GAGGCTGCGGTGCCCTTTCTCCTGAAATCACACCCATCGTAATCCGGACG ATATCCTGTAAACGATCCCCGTTGTGAAGAGAAAACCACCTGGATTGGGG GTAAAAGCTGGACGACGACATTGCAGAGTCAGCAGAGGCTACAAGCTGAA AGGAACTAAGTAGGCCGAAATGGCGAACAGTCTACCAACTATCTCGGACA TCAAGTCCATCAGTCAGGAGGAGTTCGACAGGATGTCAGGGTCAGCACCT CAACCGGGCAGTCCTGACAACACGGCCGCCAGTGTCAGCGTCGTGACACG TTCACTACCCACAGGTGTAACCCCAAACACGTCCATCACGTCAGGTGATA CGTATTACAGGAAAGCATTGCTTAACTACCTCGTGAATGCGTCTAACGGC CTCATCAACATCTACAGTGCTAAAGCTTCAGCAACAAACACTGGAATTCA AGGAAGACCAACTTTTCCTCGGCCACATTTTGGGGTGCGTCCATCGAACA TGTTTTCGAGAGATCTTACACAAAGCACGATCAGCACAATCCACATTGGA CAGCAGACTACAAAACAATCATTCATTACAACTGGGCGTAGTAATTACCC AAATGTGAGTGTCCATGCCCGAGGATACCATCCTCAAAGGTCCGGCCCAC TTCCTCGGACTGATAAGATCAACACTCTGAAGAGGAAGCTTCAAGAATCA CAAGAAGCGATATGCACATTGAAGAAGCTTAAACAGGAAGGTGTGATGTG GAGTGATAATGGGGACCATCCGGTTGATCTAACCGTCACCGGAAAGGTGG ACAGCAAAGTCGACCATGCCTTCCGGCCACATCCGGTTGGTGTTGTTGAA GTCACATCACCCAAGTCACCAGATTCCCATCCTGTGACGAGTGATGTCAG GAGATCAACCCGTGACGCTCTTCCATTGAAGCAGAATCCAGCTGTGAAGA AGAGACGTGGGCTCTCGGAGATAGTTAACAGCTTAACGAGTCGAAAACTT GGCCATGAGAGCTCTAAGGGGG

Coding sequence (CDS) from alignment at Sc0000049:1619440..1621211-

>BlTCONS00062521 ID=BlTCONS00062521|Name=BlTCONS00062521|organism=Branchiostoma lanceolatum|type=CDS|length=852bp|location=Sequence derived from alignment at Sc0000049:1619440..1621211- (Branchiostoma lanceolatum)
ATGGCGAACAGTCTACCAACTATCTCGGACATCAAGTCCATCAGTCAGGA
GGAGTTCGACAGGATGTCAGGGTCAGCACCTCAACCGGGCAGTCCTGACA
ACACGGCCGCCAGTGTCAGCGTCGTGACACGTTCACTACCCACAGGTGTA
ACCCCAAACACGTCCATCACGTCAGGTGATACGTATTACAGGAAAGCATT
GCTTAACTACCTCGTGAATGCGTCTAACGGCCTCATCAACATCTACAGTG
CTAAAGCTTCAGCAACAAACACTGGAATTCAAGGAAGACCAACTTTTCCT
CGGCCACATTTTGGGGTGCGTCCATCGAACATGTTTTCGAGAGATCTTAC
ACAAAGCACGATCAGCACAATCCACATTGGACAGCAGACTACAAAACAAT
CATTCATTACAACTGGGCGTAGTAATTACCCAAATGTGAGTGTCCATGCC
CGAGGATACCATCCTCAAAGGTCCGGCCCACTTCCTCGGACTGATAAGAT
CAACACTCTGAAGAGGAAGCTTCAAGAATCACAAGAAGCGATATGCACAT
TGAAGAAGCTTAAACAGGAAGGTGTGATGTGGAGTGATAATGGGGACCAT
CCGGTTGATCTAACCGTCACCGGAAAGGTGGACAGCAAAGTCGACCATGC
CTTCCGGCCACATCCGGTTGGTGTTGTTGAAGTCACATCACCCAAGTCAC
CAGATTCCCATCCTGTGACGAGTGATGTCAGGAGATCAACCCGTGACGCT
CTTCCATTGAAGCAGAATCCAGCTGTGAAGAAGAGACGTGGGCTCTCGGA
GATAGTTAACAGCTTAACGAGTCGAAAACTTGGCCATGAGAGCTCTAAGG
GG
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00062521-exon-Sc0000049-1564993656:1621134..1621211BlTCONS00062521-exon-Sc0000049-1564993656:1621134..1621211Branchiostoma lanceolatumexon
BlTCONS00062521-exon-Sc0000049-1564993656:1619440..1620492BlTCONS00062521-exon-Sc0000049-1564993656:1619440..1620492Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00062521BlTCONS00062521-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000049genomeSc0000049:1619440..1621211 -
Properties
Property NameValue
GeneIDBlCUFF030737