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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000048:874413..883250- Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00061712 ID=BlTCONS00061712|Name=BlTCONS00061712|organism=Branchiostoma lanceolatum|type=mRNA|length=8838bp|location=Sequence derived from alignment at Sc0000048:874413..883250- (Branchiostoma lanceolatum)
CTGAGAACCCCCTAGACAGCCTCGAGACCAAGCAGGCAAAAGTGACAAGG
CCTGTCGTCACCGGTATGTACGCATTTCACTTGTATTCCTTTTATGAGTG
TTTCTGCAACAAGATTGCTGCAAATTGACTTGTCCTTATCTGGACATTTT
TAGTGCATATAACGTTATATCAATATTAGTGTGGGTGGCTTTGGAATTAT
AGCCAAACTTGCGCAGACGACCACTTGTTTGACTGTACACTAAGGTCTTT
GCTACCCGACATTCCTATGATTTGTCTCGCACCTTTGCATTCAGACCACT
GGACTATGCTAAAGGGTAGTTTCCATTCAGATCTGCGTCATGAATTAAAA
GTTTGACTGTCTCTTTTGGACCACATTTTGCCGATATGTGGGTAGAACCA
CTGGCCTTGTGCCCAAGATGCCCCCCCTAAGAATTCTGTCGACCTTCGTT
ATGGTCTACTGCGTCCCTGACATCAAGTCAACATAACAAGCCCCAAACTA
CGTCTCGTTCTGCTTTAATGTGAGGAAAAACGTGGCAATTCAACACCTCT
ACTTGATCGTGACATCTTTGTCACCAACTTGTCACCAAAATCTTTTATGC
GACGCTGACGACTTGATTGAAGCTGTCATTCTGACATTTTTTCAGAGTAT
TTGCGTACTGTCGTAGTTAATGTACAGTAGGTTAAGTGGACATGGGTTTC
ACAATCAATGAATGTGTCTCCGGTTTCATACGTTTTACAGCACTACTTCT
TTGCTAATTCATATATTGTTATGAATAGATGTTTTTTATGGTGCACCATA
ACCATAAGTCTAAGAGTTTTGTGTACGGTGTTTGTGGGGATGTCTTTCAA
CAGCTAGGCTCAATCACAATGCTGAACTTTGTTTTCGACGGTGTGCACTA
CTAGGTTAGCCTGGATGCCTTCACAGGTCAGCTCCTCGGCTCTAGGGCCA
ACATGTTCCCAAGGACATTTAACCACAGTCCCCCCGAGATAGACCCTGAG
AGTTTCTCAGCTTTAAGGGCTGTGGTAAGATGTCATTGCGAGCTTGTCGG
CTTTAGAGCTGAAACATTATCCTGTGTAATCACTGGAAACAATCTGGCAC
CAAGGCTAGTCTAGATACGATCTTGACATCTCGGGGTGTGTACTACGATT
TACAACCCGGACTTTCCGCTTTTTCTTAAAATCGACAGATCAAGAATGTA
AGAATGAGAGTGTGGGTTTTCTTGAATCAATGCAGCATGTTCATTTTTTC
GTTGATATCCAATAATGATAATCACGCTTACAGATGAACGTGTGTATCAA
TTTAGTTATGATTATTGTTTCTGTTGATGCAAGCTAAAGAAAATTTCACA
GAAACAGACAAGTGTGTTACGTTATGTTACTCGAAATGAACCACTTTTGT
TGGCTTCTGCTTCTTTATTTGCTTTCTCCTTTCTTTTATTTACTTGTTAA
TGTTCGAAATTTCTTGTAATGATCGTTATTGGTAGTAACAGTTCAGTATA
TCCTTGCACCCCATCCGCTTATAGACTCCCCTTGTCCACTTATACAGATA
ACTTCAAGGTGTTAAGTCTTCCATACTTCTTGAGATGGTGATTGATCATC
TGCAGTTTACATTGAGTTGTGCAGGTGTACCGTGACTGTCGCCATGGCAA
CCGTCTTTGTTCGCGCGTCCCTTTGTCAGTAAATTAAGCAGTCTGTATGC
TTGCGCCCCCTGCGTACGAGAGCAAAAGGAAAGCACGAACAGATGTCATT
CAGGTCACATACTTCCTGAAGCTTCACCGTGGGTGGAAATCCGTATGTTG
TTTGTTTAGTTAAGTTGATTCTCTCGGAACTTCTGTGACTTTATAAAGCC
AAGCAACACTAGCGTTCAAATCATATGGAGTTAACTTTCTGTGGAGTTAT
ATGATACCACAATGCATAGATTACACAAACCAGTGAACCAGACAACAGAA
AGTCTCAAGTTCAATTCAAGTTCATAATCCTTTGAGGGGGAAGTCACCAG
AATGTCTGAACAAACAACAACTAACAAGCGTCTCTTTACCATGTTCGTTT
GATTGAACTGTCTTGCTTTCATTTATTTGTATGTAAGACCTGGATACTAG
CCTGTGTTGAGGAGTCCAAACCGACACACCATGATTCGACAGGGAAACGT
GAAGTGGACGACCACGACAACTGTGACCAAAAATGGGAAAACCGTCCAAA
CCAAAGGTTTGTTATCTTAAATGTCTGTAACATCAACTTGGAATGAATAC
ATTCGCAGATGTATGCTAGGCCTAGGAAAAATGATGTGTTTCCGACTACC
CGACCGACCCTAGCTTTGAGGAATTGATGTAAGAATGTGTAGAAAAAACG
TTAACACTATAATACTTCTTTGTTTATTTTATTTTATTTTATTGATGTAC
TTGTTCTTGTACCATGTATATCTGTATGATTGCAACATCATGTTGAAATT
ACCAATGTCTGATGCATTTCAGTTTTATATTCTTAAACTGTAGTTGTTAG
AAAACTTAATCCGAGAATAAAAAGAGAATCCTTATTTACCTACCGACAAT
ACTTTTTCAAGACCGTAATCGGAAACAAAACATTTAATTTTACTAAGCCT
CAGACACATACATCCAGGTGTTCGGTACTTCCACTACATAAAAAGAGGGA
CTAATTAAGTCCGGTAAAGGTGCCCTTGGCATTTAGACAACCATTATCAG
ACTTCCCTCGCCATCATTTAGTCTCTACCAGACTGACTACGCTAGCCATT
GGGGATAATAATTTGCCAGGGGAGATTGGCTACCAAAGGGGTTGACTGGC
CGGGATCGGGAATGTTGACCGTACCGTGGACTGGCTCTCCTGGCCAATTA
TTCCCCTTTTTGCCGAATTTCACTATCAGTACCCCCGTGGTGGAGGCTAG
CTATCATTTAGACATACCAGACGTGCTGATCAGACTTACCTGAACTGTAA
TCGACAAATATCACCATTTGTATGCTCAAGATCTGAGCCCATAGTATTCA
TTTATAGTGAATAAGTGTTGCAAACAATATTGGTAAATAACAGGAGGTAC
GGTGATAAGTCACAACAAACTGATGTCTTTGTTTACGTGCACGTGAACAA
AGTTGAGTTAGTGTTGCAATAATCGTACGTACAGCAAGTATCTATTACTT
TTGTACCTCATTTTGGTTGGTACCCCCTTCTAATTTCATCTGTACCTTTC
AGACAGCGGAACTGGAGTCCCGGGCGGGAGACGGTCTCCTCTGCTTGGAG
CAGGGCTAGCCTCTGACCCCATGTTCGACCTGGGGATGAGGAACATGGAC
AGTTTCCTGTCTGTTGAACCACGGGTATTCTTGAAATCCAAGACCTCATA
CCTTAGTTTTTGTGAATTTCTTGTTCTATTCATTATAGTGAATCTCTCAC
TGACTCTGTCTAATGCATTTTCCCACTGGCTCCCATAAGGCAACACCCAT
AAGCAGGTGATCAGGTACAGGAAATGAGGTAATTTATTCTGGGACATTTC
TGGGACCTTTGACATAATTTCCTGTCAGTATCCCCGACCTGCACGTGGAA
GCCATCTTCAATCTTGTGGGTTGGGTGGAGGTGTGCATTTTGACCTCCAA
TTCAACCTTCACTGCCTGTCACTCTACTGCAAATCTAATCGAAAGGGTTT
ACATTATGCCCTCACCAATAAAAGTATAAGCGCAATACTTTCGTAATATC
GTTTTTCTGCACCACAGCAATCATTCTGTTTGATCAATGGATTGCAGTGC
CATTTTGGTCTGTAAGATAGATTGTGTTCTTGACTGCATTGATTAGATTT
CCGTCAGAAAATGTTAGCCTCTACCAGGACGTGGCCTGAAAGAGTAGAAA
TCGGCCAAACAGACCAATAACGTACCAAAGGAGTTGACCAGCCGATAGAT
ACAGTTTGCCACGTCAGGACAGTATCTATCGCCCTCCTCTGGTATGTTTT
CTGTCTATTCGGCCGATTTCTACTCTTTCCAGCGATGTCTGGAGCCTGGT
AGAGGCCAGGAAAATTTAGAAGATTCATGCGGCATCAATAAACACATGGC
TATTTATAATCTCGTTCTGTAGCCGAGACGGGCCTCGTCTCCATCTCTGC
TTGTACCTGGAGGAAGAAGCCCGTCCCCAACAATGTTTGTACACGAAAGG
CGAAGCCCATCCTCAACTCCCACTGGTACGTTCCACGAACCCATGGGATG
TGAGCACTCCGGTCCACCCTGTTGAACGTGAACCAGTGTTAGCCTCTACA
GCAGGCTCTCTGGGCCTTTTTTAAAATACACTTCTTGCTGATGACTTATT
TTTGCACTGGGTTGTCTGTGCAGCCAGTCCTTAACCATGGCCTAATGGTT
ACGGGCTGGCTGCACAGACGATCCAGTTCAAACAGCCTGCTAGATTACAT
CAATAAGGCTACATTAAACATGAAGATAGCAACCAAAGTTCGCCTGCTCT
CGGGGGTTCTTTGGATTTTAGCATTTCATTGATCGGAGCGTCAGTTGTTG
TTGTTGCTGTTGTTGTTGTTGTGGTTGTGTTGTGTTGTGTTGTGTTGTTT
GTGTTCAAAATCTTACATCCGCGGCAGGTATTAAAGGAACACCTTCGTTC
TCCTTGCACAGTCGTTACAACCACGGTCCACACGGAAGCCAAGACAAAAT
CTCTTGACAAGAAGAAGAAGAAGGAAAAAGACGCAGAGAACGACGGCAAA
GAGAAGAAGCCCGGAATTACGGGTATTGTTTTTTTATAATGGAATTCTGC
TAGAGTTTGATTATAAAAGGTGCTGTGACGTCGTTTTCTAGCTCAGGCTA
TAACCATACAACGATACAACAAAGCTATTCTAGACCCCGCATACTTGGTT
CAGCAATTGAAAAAGAACCGAACAGTTGATCCGGAAAAGGCGCTTGTAGC
TGATGTTATATGTATGCGTTACAACTGCGTCCCCTATCGTTTGTTATATC
AACACCTGCAGTCTGACCGTTACGTTTGAACGGAAGGTCCCACACAGCTT
GGAAGTTAGTCCTAACTCTTTTAATGTCTCCGTGTAGATAAGGTGAAAGA
TTTCGTCTCGTCATCTGTGTCCAAGTTGACATCAAAGTCTCCGACTCCCG
AGGAGGAAGTGACCGAGAAGATGAAGAAAACTTCCGTTAGCGACCTCGGA
CCGGTGCAAGTGTTCCTGTCCTACCAGTGGGACCACCAGAAACAGGTAGG
GCAAAGGACATCTCTGTCATTCACAAGTCTTTGTATTGAAAAAATGCAGA
AGAAAATTTACTTACCTAGGGGCACACGAAACCACATAAGACCACTAAAT
ACTAAATATGTCTACATTAGATGATATGTTGGAGGAGAAGGGCTACAGCT
GTGGACAAGGCCTTGCGAAAGTCGCTGTACTTTTGTTTTGTCAATAATAT
TGTNTTTGCCAATAATATTGTATTTCTACATTAGGTGATCCAGCTCCATG
ACATGTTTGAGGAGAAGGGCTACAGCTGCTGGATGGACATTAAGGAGATG
GGCGGTGGAGACAAACTGTACGCCGCGATAGACAAGGGCATGAGGCAGAC
CAAGGTTAGACTTTCAATGTTCTGTGTTTTAGACCGTAGAAAGTTTAAGG
GCATAGGGAGCCACTATACCGTCTAGATGTGATTTCTTAATTCTTATCTG
TCTATATTGACAAAACATTCAGAAAAGCCCTCTTACGGTGTTCTCCATAG
GTCGTCATCAGCTGCGTCACTCCGAAGTACACAGAGTCTGCCAACTGTAG
GAACGAAGTCGCGCTTGCGCACAGTCTGAAGAAAACAATCGTTCCCGTCC
TGCTGGAGAAAACGAGCTGGCCGCCAGAGGGCCCCATGGCCATGCCGTTC
GCACAGCTCCTATACATCGACTTTACAAAGGAATCCAAGAGGCATCCTTG
GCAGGGGCCGCACTTTGACGAACTCATGACAAGCGTTGAGCATAGTACTA
AGGGGTAGCCTTGATTATAAAGTAAATTTGATGAACAAACATGTGATTAG
TGATGTCTAGTCTTTGAAAAACGGAAACCATCGCCCGTTAGGCGTTACTG
TGCTGTCGCAGTTCAGTTACATGTCCGAGTTAGTCTCGATGTATGTGCTC
CTTTGTGACAAAGGTGCACTGGGTGTTACTTTGGATTTCAGTAGTTTCTT
CAGGATATTGATTTGAGATAAAAGTTAGATACACTATAGATTTTCAGTTG
TGCCGAGAGCGGATCTTATAAATCTCAATAACAAGCCTTACAATAGCAAA
CGAAGAATTGTATCGTAGACCTTATTTGATACTCACTGTCTGTCTCTATG
GGTAATGTTACCTACGATGTGTACTTGAAATATGACTGTTCATTTGCAAT
AGCTTTGCAAAAGATTCAACAGATACTTTTTACAGGTTAGGAGTGTATAT
GGCTTAAGTATGAATCTTAAAGAAAATCAGGTATTTTCCTGCAAAACGAA
TGTGTCTGGTTGACCAACCTGGATGCAAAACTGTTTTATCGTTACCATGA
AAGAGGATTTTATGCTGTTGTAAAATCTTTCATTCAAACAGTGGCAGACA
TAAACTAGAAAAAACACCGGTACCATGTGTCAGACTCTGTACAGTGGTGC
TGAGCAGACTTATTTGAAGCATTTAGGAGAAAACATGGCCAGCCATGTTA
AAGAAATTGGTTTGTACATTTCTGAACATTCATCAAACATTGCTAATGGA
CGCCACGAATAAACAGTCAAAATAGCATTGTCTTGTGAATTTGTCATATG
CCATCTTTGTCTGAAGCTTGTTTTGTTCAGATCCACTGCCGGTATTTCAT
TTACTCACTTGACAAGGATATTAATTTTTTCACATGACACTTGGTAGTGA
CGACCTTAAGAGACGTCTTGAAATTCATTTTGCCAAGGATGAAGGTTTTG
TAAGAAGATGGTTCTTTGGCTCGAATATGCCTCAGCATATTGGATATTGG
GAGTTCAGGTGCGTACTAGAGATTTCGAGTATGGCACCTGCTCTGTTGGT
TACCATCCTATTACTGTGTTGTTCACATGGAACGTGTCCTAGTCATCGTT
CTTTGTGGCAATGGTAAATCAATATCTAGTCCTAGCTAGTGATCTCGCTA
TGCAGTAGCAATTTATAAAACAGTATTAATGGATGCTATGAATAACCTGG
CAACTAGTATAGTCATGATCCTGTGAACGTACATTTTCTGACTGCCTGGC
TTCTCTGACAGCCATTGGGTGGAAGGCAGCTTCCTCCCCAAACATCTGCT
TGGAGATTATCACTGAACACACTCATACTCATAGAGATGCACTAGGCACA
ATATAGGCTTTGTTGAACGTTTGGGTCATGTAATCTCCACCAGACTTAAC
TATTTCTTCAGCCCGCAAATAAGTCTGCCTAGAGAGGCTATCCGTTAGGT
AGGTGGCAAAGTAATGAATAATTTTCCATGACGAACACGAGTTACTAGTA
TCATTATCTAATAGTGATAATATCAATAACACAAAGCTAAGACATTGTTT
GAAATATTTCTTAGATCTTGCAGAAGCAAAGACTTTATATGTGTTCATTC
CAACAATGTATTTACCTTCACAAACAGTATAAAAGTAAAAATGTTAGTTT
CAAAGCAAAGATGTATATTAAAGGGAACTGTAAAATGATTTTAGATACAC
ACTTAAACTTGCACACAACAAATGTTGTTTATGTTCATTCCACAATAAGG
ATGTTGATCTCCTACACACCCTCTCAACAAAAGTTACCAACACAGATGTC
ACATCTACAACTGAATATACTTTACAGCTACATGTATGCTTTTTCCACCA
CTTGAAATACTAGTAGAAGCAAATATTCTATGAGAGCCCGAAACATACAC
AGAAAATCTTATCTACATTGGTGTAACAAAATAGAAAATACTTTCCCCAT
GATAGATCTATCATAATCTCTTTTGGCTTAAAATTGATAATTTTCTTCCA
AGTTTGATAAGTTTTTTTTTCTCTTTTCAGATACTGCAATAACAGCCTAA
TACTACTGACACCTAATCATCTCATTCAAAATAAAACGGTACTTGCACAG
ATGTAAAAAATAATTTCCACTTTACAAAATGTTTCATAACATTATGACAC
ATACAGATTACTTCAGTTTATGAAGTCAAGCATGGCTTTATACACAGTAA
GTTAGCAATATGGCTGCAAGCAAAACAACAAACTGATCCTAAACAGTGTT
ACCATCTAATGGTCACCATCTTGAATCTCTCAAAGTTTGCAAGTCGTCCC
AAAATACATGTGCAACAATGGAATCAAGGGATATTACATTAAACTTAACA
TTATAGTATATACACACAAATGTACCTCTCATGGCTTAGCTCCACTGATT
GAATGGCATATTGACTTCACTTTCTACAAATACATGATTGTACATTCACT
TCTTGGTCTACAGATGTCACATTTGGGTACTGTAAATCTTTGATCATGAA
ATTCATGGTCAACTTCTCCATCATGAATTCATGACAAAGAGTGCATTGCT
ACTTTTCTACAGAATTGTTTCAACTGCAAACTAGAACAGCGTGAAAACCA
CTTTTCCCTTCTGCAAAAATAAATGAATGCATTTTATCATTTCCGTTCTG
GTGACATGCTGCGAGACGTGGACCCAGGTCTCCTGACGGGAAGTCTGGAC
TTGGCGTGGGCTGCGAGGATTGGCGTGGACGGATACCGTGACAGCCCCGC
CCCAGCTGACTTGGACGTGGACGGGATCTGGCTGGACTGCTTGGGTTTCA
GAACTTCTGTTGACCTGGACCTGGAAATGAGAAATAATCTATTCAATAAA
GCAAGGCAAAGTTAGTCTTAAGTACCCTTTGATAAATG Coding sequence (CDS) from alignment at Sc0000048:874413..883250- >BlTCONS00061712 ID=BlTCONS00061712|Name=BlTCONS00061712|organism=Branchiostoma lanceolatum|type=CDS|length=453bp|location=Sequence derived from alignment at Sc0000048:874413..883250- (Branchiostoma lanceolatum)
ATGAAGAAAACTTCCGTTAGCGACCTCGGACCGGTGCAAGTGTTCCTGTC
CTACCAGTGGGACCACCAGAAACAGGTGATCCAGCTCCATGACATGTTTG
AGGAGAAGGGCTACAGCTGCTGGATGGACATTAAGGAGATGGGCGGTGGA
GACAAACTGTACGCCGCGATAGACAAGGGCATGAGGCAGACCAAGGTCGT
CATCAGCTGCGTCACTCCGAAGTACACAGAGTCTGCCAACTGTAGGAACG
AAGTCGCGCTTGCGCACAGTCTGAAGAAAACAATCGTTCCCGTCCTGCTG
GAGAAAACGAGCTGGCCGCCAGAGGGCCCCATGGCCATGCCGTTCGCACA
GCTCCTATACATCGACTTTACAAAGGAATCCAAGAGGCATCCTTGGCAGG
GGCCGCACTTTGACGAACTCATGACAAGCGTTGAGCATAGTACTAAGGGG
TAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| BlTCONS00061712-exon-Sc0000048-1564993656:883188..883250 | BlTCONS00061712-exon-Sc0000048-1564993656:883188..883250 | Branchiostoma lanceolatum | exon |
| BlTCONS00061712-exon-Sc0000048-1564993656:881045..881163 | BlTCONS00061712-exon-Sc0000048-1564993656:881045..881163 | Branchiostoma lanceolatum | exon |
| BlTCONS00061712-exon-Sc0000048-1564993656:879927..880048 | BlTCONS00061712-exon-Sc0000048-1564993656:879927..880048 | Branchiostoma lanceolatum | exon |
| BlTCONS00061712-exon-Sc0000048-1564993656:878529..878639 | BlTCONS00061712-exon-Sc0000048-1564993656:878529..878639 | Branchiostoma lanceolatum | exon |
| BlTCONS00061712-exon-Sc0000048-1564993656:878056..878213 | BlTCONS00061712-exon-Sc0000048-1564993656:878056..878213 | Branchiostoma lanceolatum | exon |
| BlTCONS00061712-exon-Sc0000048-1564993656:877697..877816 | BlTCONS00061712-exon-Sc0000048-1564993656:877697..877816 | Branchiostoma lanceolatum | exon |
| BlTCONS00061712-exon-Sc0000048-1564993656:874413..877550 | BlTCONS00061712-exon-Sc0000048-1564993656:874413..877550 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000048 | genome | Sc0000048:874413..883250 - |
Properties
| Property Name | Value |
|---|
| GeneID | BlCUFF030467 |
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