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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00044245 ID=TCONS_00044245|Name=TCONS_00044245|organism=Clytia hemisphaerica|type=transcript|length=1023bp
tgaaaatagtccaaaaaataaggaattgttaaggaactgctcaggctgag
aataagaaaacaagctttaaggaacagtaaaagTAAGAGTTTTCACTTGA
ACTAGCTATGTAATAAGCAACtcataaggaactttgaggctgataTTTTC
TGTAAAattaaggaactccaggctcagagcaaagttaaggttccttataa
aaaaacgtgtaatatatTAGAAAATTAGTGAATATGAAACTCAGACTTTT
TACATAATATATTCGTGTGTTATCAGTATTGTATAATATAGTCATACGTC
AAAGGTGATTTCAAGATTATCCTGCAATAAAATCATCTCAAtatcaatgt
tactatgaattTCAGAGTGGTCAACTGTTTGTTTAGGTTTCTCAATGTTT
GTAATGAGAAGTCTGGGAGAAACGTAAGTGTTCCAAAATAATTTGAGGTT
TGATAGTTTTTCAGTCCAGAATACTGCatcaaatacaattttttccaaat
aaaaaCTTCTATTAGCAATGTTGAAAACGAAAAAGTATCCAAATGATCGA
TTTGTCACAGCCATCTGTCCTTGAATTTGGTAATAATATTCACTTGATCG
TTTTAATTTTGTTTGTccatttaaattttctaaatgtttACTATAAGTTC
TCCAAGACGGTGCTCTATTTGCAGGCACACTAGGGGGGCATTTGACTTCA
CAAACACCTTTTCCACAACAGGGGCATTCGAATTCCAGGTCAGGTGTGAC
ACTTATGTAAGGGTCTAATTTTGAAACAGTCATGCCAGGACTAGTGAATT
TAATTCCTTTATGTTTAATTCGAATTATTTGCTTGAATCGCATAATGGCA
TGTCGTTCTGACGAAATGCCATGTTTCATTTGCCAAGTAGGTTTTTTATT
GTCTTCTCCCATTATCTCTTTTAGAAGGGGAATAGGTTCTTGgtcagatt
tttttaaagattccatTCTTGTAAAgactttcttaaattttgaagcTGTT
ATACGACCTTTTCTTTGCTCAAC Run BLAST on NCBI protein sequence of TCONS_00044245-protein >TCONS_00044245-protein ID=TCONS_00044245-protein|Name=TCONS_00044245-protein|organism=Clytia hemisphaerica|type=polypeptide|length=243bp
VEQRKGRITASKFKKVFTRMESLKKSDQEPIPLLKEIMGEDNKKPTWQMK
HGISSERHAIMRFKQIIRIKHKGIKFTSPGMTVSKLDPYISVTPDLEFEC
PCCGKGVCEVKCPPSVPANRAPSWRTYSKHLENLNGQTKLKRSSEYYYQI
QGQMAVTNRSFGYFFVFNIANRSFYLEKIVFDAVFWTEKLSNLKLFWNTY
VSPRLLITNIEKPKQTVDHSEIHSNIDIEMILLQDNLEITFDV Run BLAST on NCBI transcript from alignment at sc0005245:948..1970 Legend: exonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00044245 ID=TCONS_00044245|Name=TCONS_00044245|organism=Clytia hemisphaerica|type=transcript|length=1023bp|location=Sequence derived from alignment at sc0005245:948..1970 (Clytia hemisphaerica)
GTTGAGCAAAGAAAAGGTCGTATAACAgcttcaaaatttaagaaagtcTT
TACAAGAatggaatctttaaaaaaatctgacCAAGAACCTATTCCCCTTC
TAAAAGAGATAATGGGAGAAGACAATAAAAAACCTACTTGGCAAATGAAA
CATGGCATTTCGTCAGAACGACATGCCATTATGCGATTCAAGCAAATAAT
TCGAATTAAACATAAAGGAATTAAATTCACTAGTCCTGGCATGACTGTTT
CAAAATTAGACCCTTACATAAGTGTCACACCTGACCTGGAATTCGAATGC
CCCTGTTGTGGAAAAGGTGTTTGTGAAGTCAAATGCCCCCCTAGTGTGCC
TGCAAATAGAGCACCGTCTTGGAGAACTTATAGTaaacatttagaaaatt
taaatggACAAACAAAATTAAAACGATCAAGTGAATATTATTACCAAATT
CAAGGACAGATGGCTGTGACAAATCGATCATTTGGATACTTTTTCGTTTT
CAACATTGCTAATAGAAGtttttatttggaaaaaattgtatttgatGCAG
TATTCTGGACTGAAAAACTATCAAACCTCAAATTATTTTGGAACACTTAC
GTTTCTCCCAGACTTCTCATTACAAACATTGAGAAACCTAAACAAACAGT
TGACCACTCTGAaattcatagtaacattgataTTGAGATGATTTTATTGC
AGGATAATCTTGAAATCACCTTTGACGTATGACTATATTATACAATACTG
ATAACACACGAATATATTATGTAAAAAGTCTGAGTTTCATATTCACTAAT
TTTCTAatatattacacgtttttttataaggaaccttaactttgctctga
gcctggagttccttaatTTTACAGAAAAtatcagcctcaaagttccttat
gaGTTGCTTATTACATAGCTAGTTCAAGTGAAAACTCTTActtttactgt
tccttaaagcttgttttcttattctcagcctgagcagttccttaacaatt
ccttattttttggactattttca Coding sequence (CDS) from alignment at sc0005245:948..1970 >TCONS_00044245 ID=TCONS_00044245|Name=TCONS_00044245|organism=Clytia hemisphaerica|type=CDS|length=732bp|location=Sequence derived from alignment at sc0005245:948..1970 (Clytia hemisphaerica)
GTTGAGCAAAGAAAAGGTCGTATAACAgcttcaaaatttaagaaagtcTT
TACAAGAatggaatctttaaaaaaatctgacCAAGAACCTATTCCCCTTC
TAAAAGAGATAATGGGAGAAGACAATAAAAAACCTACTTGGCAAATGAAA
CATGGCATTTCGTCAGAACGACATGCCATTATGCGATTCAAGCAAATAAT
TCGAATTAAACATAAAGGAATTAAATTCACTAGTCCTGGCATGACTGTTT
CAAAATTAGACCCTTACATAAGTGTCACACCTGACCTGGAATTCGAATGC
CCCTGTTGTGGAAAAGGTGTTTGTGAAGTCAAATGCCCCCCTAGTGTGCC
TGCAAATAGAGCACCGTCTTGGAGAACTTATAGTaaacatttagaaaatt
taaatggACAAACAAAATTAAAACGATCAAGTGAATATTATTACCAAATT
CAAGGACAGATGGCTGTGACAAATCGATCATTTGGATACTTTTTCGTTTT
CAACATTGCTAATAGAAGtttttatttggaaaaaattgtatttgatGCAG
TATTCTGGACTGAAAAACTATCAAACCTCAAATTATTTTGGAACACTTAC
GTTTCTCCCAGACTTCTCATTACAAACATTGAGAAACCTAAACAAACAGT
TGACCACTCTGAaattcatagtaacattgataTTGAGATGATTTTATTGC
AGGATAATCTTGAAATCACCTTTGACGTATGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00044245-exon-sc0005245-1491911889:948..1970 | TCONS_00044245-exon-sc0005245-1491911889:948..1970 | Clytia hemisphaerica | exon |
| TCONS_00044245-exon-sc0005245-1510915933:948..1970 | TCONS_00044245-exon-sc0005245-1510915933:948..1970 | Clytia hemisphaerica | exon |
| TCONS_00044245-exon-sc0005245-1575043694:948..1970 | TCONS_00044245-exon-sc0005245-1575043694:948..1970 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0005245 | supercontig | sc0005245:948..1970 . |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004518 | nuclease activity |
| GO:0003677 | DNA binding |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0003677 |
DNA binding |
| molecular_function |
GO:0004518 |
nuclease activity |
Blast
The following BLAST results are available for this feature:
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