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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00043220 ID=TCONS_00043220|Name=TCONS_00043220|organism=Clytia hemisphaerica|type=transcript|length=987bp
tttcaaaattgataacAATAATTATTTAAAATAACACAAAATCTGGACAG
AAAATATCCTTTTACTTTATACTATACATAAATCAATGTTAGGATATGCG
CCGGCCTTTGACTATTCAACTAAAACGGCAATCAAATGCAAAAATGTAGT
TCCAAGTACGGAGACTTCATACTCAAACGAGTTTTATTCAAATAAACTCT
CCTTAGGAAAACCTTTTAGTCTccttgaaaattaaaagaaagctGCTGCT
TGCCGAAGATAAGTTTTTCATAGTTCAATAATAAACCTTGGTAAATATTT
CTCGCACAAACTTAGTTTACTTTTAGGCAAATGTAAATTGTAATTTATAT
ACCCTTCAATTCGCTAAAAATAAGTCACTCgccaaataaaaaatgtttaa
aattgatAACTCTGATATCACCTATCACCTAGGTATCTTGCTGGACCCGT
ATAATGTAATATAGATAAGTCCAAAAAagtactttaaaaaaatactgaaT
ATAAACtattaaaattcatcaaaaaatcaTTCACTTTCTCCAACTTATTG
GTACTGTTCCCTATTGTTAATGAGTAGGTTCTTGGATAGAAAATGAACAT
TTTGatatcaaaaaacatttcagaATCCACCTCAAGCAaccttttcgaaa
ttttatttaaaaaatgtttcgcCGATAAGGCCTTtacaaattttcattag
gaCCATAGAATAAACCTTCCCAAGGAAGATGAGTGGTCAACCTTTGTCTA
GGAGGGTGAATCGAATATTTACATATTGATCTGGGGAACAGAGGATTTCT
GAAAAGTTAATAAAAAGTGGGGATGAAAGTGCAAAAATTAAATATAATAC
TAATATTACAAATaaatcatatttttaaatttcactGTTCGACTGTTCGC
CGCAATTATCATTATTTAATTGTTAGGTTAAATAAAGATACGATAATGCA
GTGAATTATTTGCTGGTGACAATTCTTTAAGTGGGGG Run BLAST on NCBI transcript from alignment at sc0004025:7612..8598 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00043220 ID=TCONS_00043220|Name=TCONS_00043220|organism=Clytia hemisphaerica|type=transcript|length=987bp|location=Sequence derived from alignment at sc0004025:7612..8598 (Clytia hemisphaerica)
CCCCCACTTAAAGAATTGTCACCAGCAAATAATTCACTGCATTATCGTAT
CTTTATTTAACCTAACAATTAAATAATGATAATTGCGGCGAACAGTCGAA
CagtgaaatttaaaaatatgatttATTTGTAATATTAGTATTATATTTAA
TTTTTGCACTTTCATCCCCACTTTTTATTAACTTTTCAGAAATCCTCTGT
TCCCCAGATCAATATGTAAATATTCGATTCACCCTCCTAGACAAAGGTTG
ACCACTCATCTTCCTTGGGAAGGTTTATTCTATGGtcctaatgaaaattt
gtaAAGGCCTTATCGgcgaaacattttttaaataaaatttcgaaaaggtT
GCTTGAGGTGGATtctgaaatgttttttgatatCAAAATGTTCATTTTCT
ATCCAAGAACCTACTCATTAACAATAGGGAACAGTACCAATAAGTTGGAG
AAAGTGAAtgattttttgatgaattttaataGTTTATAttcagtattttt
ttaaagtactTTTTTGGACTTATCTATATTACATTATACGGGTCCAGCAA
GATACCTAGGTGATAGGTGATATCAGAGTTatcaattttaaacatttttt
atttggcGAGTGACTTATTTTTAGCGAATTGAAGGGTATATAAATTACAA
TTTACATTTGCCTAAAAGTAAACTAAGTTTGTGCGAGAAATATTTACCAA
GGTTTATTATTGAACTATGAAAAACTTATCTTCGGCAAGCAGCagctttc
ttttaattttcaaggAGACTAAAAGGTTTTCCTAAGGAGAGTTTATTTGA
ATAAAACTCGTTTGAGTATGAAGTCTCCGTACTTGGAACTACATTTTTGC
ATTTGATTGCCGTTTTAGTTGAATAGTCAAAGGCCGGCGCATATCCTAAC
ATTGATTTATGTATAGTATAAAGTAAAAGGATATTTTCTGTCCAGATTTT
GTGTTATTTTAAATAATTATTgttatcaattttgaaa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00043220-exon-sc0004025-1491911889:7612..8598 | TCONS_00043220-exon-sc0004025-1491911889:7612..8598 | Clytia hemisphaerica | exon |
| TCONS_00043220-exon-sc0004025-1510915933:7612..8598 | TCONS_00043220-exon-sc0004025-1510915933:7612..8598 | Clytia hemisphaerica | exon |
| TCONS_00043220-exon-sc0004025-1575043694:7612..8598 | TCONS_00043220-exon-sc0004025-1575043694:7612..8598 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0004025 | supercontig | sc0004025:7612..8598 . |
Blast
The following BLAST results are available for this feature:
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