TCONS_00043039 (transcript) - C. hemisphaerica

Overview
NameTCONS_00043039
Unique NameTCONS_00043039
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length110

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00043039 ID=TCONS_00043039|Name=TCONS_00043039|organism=Clytia hemisphaerica|type=transcript|length=110bp
AATTTCAATTTCTTGCACCCAGTGAGATCCCTCAGACGTTTTGGCAGCGA
GTTGAAAAGCCTTGGTCCTTGGACTTTAAAACTTGAGTATATGACTTTTT
ACCAGGGCCC
Run BLAST on NCBI

transcript from alignment at sc0003874:3323..3432

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00043039 ID=TCONS_00043039|Name=TCONS_00043039|organism=Clytia hemisphaerica|type=transcript|length=110bp|location=Sequence derived from alignment at sc0003874:3323..3432 (Clytia hemisphaerica)
GGGCCCTGGTAAAAAGTCATATACTCAAGTTTTAAAGTCCAAGGACCAAG
GCTTTTCAACTCGCTGCCAAAACGTCTGAGGGATCTCACTGGGTGCAAGA
AATTGAAATT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_026783XLOC_026783Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00043039-exon-sc0003874-1491911889:3323..3432TCONS_00043039-exon-sc0003874-1491911889:3323..3432Clytia hemisphaericaexon
TCONS_00043039-exon-sc0003874-1510915933:3323..3432TCONS_00043039-exon-sc0003874-1510915933:3323..3432Clytia hemisphaericaexon
TCONS_00043039-exon-sc0003874-1575043694:3323..3432TCONS_00043039-exon-sc0003874-1575043694:3323..3432Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0003874supercontigsc0003874:3323..3432 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00043039 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top