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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00042725 ID=TCONS_00042725|Name=TCONS_00042725|organism=Clytia hemisphaerica|type=transcript|length=615bp
ATTAACCGTCACTCCATCAAAGTTTGAACAATTAAAGAAGTGTGGCTTGC
TTCCAGCCAACGCAGGTCAAGCATCGAAAGTTAAGTCAAACTTAGCAAAA
TACAGCCATCATAAAAAGGTTAGCGAAAAGTTGGCACCCAAAATGGTTAC
TTTTGTCGATCGAAATGGCGTGGAATTAACACTCACTCCATCAAAGTTTG
AACAATTGNAGATGGTCACCTTTGTGGATCGAAATGGTGTGGAATTAACA
GTCACTCCATCAAAGTTTGAACAATTAAAGAAGTGTGGCTTGCTTCCAGC
CAACGCAGGTCAACCATCAAAAGTTAAGTCAAACTTAGCAAAAAACAgcc
atcataaaaaagttacCGAAAAGTTGGCGCCCAAGGTGGTCACAGAAAAC
AAGAGCGAAGATGAACAAAGCCTTGGCATATCAAAAGAACGTTTAGCGTT
CGCACAACAACTCATTAAGGAAGCCCAAGAGGCTCCGTTGCCCGAAGATG
ACGGTCGATGGTGAACTCTTCTCCGCATCAAAAACATAAATAATAAACAA
CCAAAACCTACAAACTCCtgaaattattttgcattcAATGTAAATATAAA
TCTGTATAATTAAAT Run BLAST on NCBI transcript from alignment at sc0003632:10438..11400- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00042725 ID=TCONS_00042725|Name=TCONS_00042725|organism=Clytia hemisphaerica|type=transcript|length=963bp|location=Sequence derived from alignment at sc0003632:10438..11400- (Clytia hemisphaerica)
ATTAACCGTCACTCCATCAAAGTTTGAACAATTAAAGAAGTGTGGCTTGC
TTCCAGCCAACGCAGGTCAAGCATCGAAAGTTAAGTCAAACTTAGCAAAA
TACAGCCATCATAAAAAGGTTAGCGAAAAGTTGGCACCCAAAATGGTTAC
TTTTGTCGATCGAAATGGCGTGGAATTAACACTCACTCCATCAAAGTTTG
AACAATTGNAGATGGTCACCTTTGTGGATCGAAATGGTGTGGAATTAACA
GTCACTCCATCAAAGTTTGAACAATTAAAGAAGTGTGGCTTGCTTCCAGC
CAACGCAGGTCAACCATCAAAAGTTGAATCAAGCTTAGCTAAAAACAGCC
ATCATAAAAAAGTTAGCCAAAAGTTGGCTCCCAAAATGGTTACTTTTGTC
GATCGAAATGGCGTGGAGTTAACCGTCACTCCATCAAAGTTTGAACAATT
AAAGAAGTGTGGCTTGCTTCCAGCCAACGCAGGCCAACCATCGAAAGTTA
AGTCAAACTTAGCAAAATACAGCCATCTTAAGAAGGTTAGCGAAAAGTTG
GCACCCAAAATGGTTACTTTTGTCGATCGAAATGGCGTGGAATTAACACT
CACTCCATCAAAGTTTGAACAATTAAAGAAGTGTGGATTGCTTCCAGCCA
ACACAGGTCAACCATCAAAAGTTAAGTCAAACTTAGCAAAAAACAGCCAT
CATAAAAAAGTTACCGAAAAGTTGGCGCCCAAGGTGGTCACAGAAAACAA
GAGCGAAGATGAACAAAGCCTTGGCATATCAAAAGAACGTTTAGCGTTCG
CACAACAACTCATTAAGGAAGCCCAAGAGGCTCCGTTGCCCGAAGATGAC
GGTCGATGGTGAACTCTTCTCCGCATCAAAAACATAAATAATAAACAACC
AAAACCTACAAACTCCTGAAATTATTTTGCATTCAATGTAAATATAAATC
TGTATAATTAAAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00042725-exon-sc0003632-1575043694:11093..11400 | TCONS_00042725-exon-sc0003632-1575043694:11093..11400 | Clytia hemisphaerica | exon |
| TCONS_00042725-exon-sc0003632-1575043694:10438..10744 | TCONS_00042725-exon-sc0003632-1575043694:10438..10744 | Clytia hemisphaerica | exon |
| TCONS_00042725-exon-sc0003632-1510915933:11093..11400 | TCONS_00042725-exon-sc0003632-1510915933:11093..11400 | Clytia hemisphaerica | exon |
| TCONS_00042725-exon-sc0003632-1510915933:10438..10744 | TCONS_00042725-exon-sc0003632-1510915933:10438..10744 | Clytia hemisphaerica | exon |
| TCONS_00042725-exon-sc0003632-1491911889:11093..11400 | TCONS_00042725-exon-sc0003632-1491911889:11093..11400 | Clytia hemisphaerica | exon |
| TCONS_00042725-exon-sc0003632-1491911889:10438..10744 | TCONS_00042725-exon-sc0003632-1491911889:10438..10744 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0003632 | supercontig | sc0003632:10438..11400 - |
Blast
The following BLAST results are available for this feature:
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