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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL78626_cuf0 >transcript:BL78626_cuf0-protein ID=transcript:BL78626_cuf0-protein|Name=transcript:BL78626_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=141bp
MYSCRPYESRCTFVMSIKIFCAFILITDNRLAFILLVYPLHDVLIHVALQ
GSRSAITWYIHTNKLSKKNGQNFEVHIFLALQYVYTRDQCVENYCKVHQL
QMTLDSEPSVNKAESVLTQLATIGPMTGQEMFKYTSFEMKL Run BLAST on NCBI mRNA from alignment at xfSc0003130:1..1953- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL78626_cuf0 ID=transcript:BL78626_cuf0|Name=transcript:BL78626_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=1953bp|location=Sequence derived from alignment at xfSc0003130:1..1953- (Branchiostoma lanceolatum)
GTATGAGCCGATTTGGCCGACCCCCATCTTCCCACCTCTGCCTGGTTTTC
TCATGCAATGACTCTTAAGTTTGCGGTAGTGCTCTTGTCACATACTGCTA
CTGTAACAGTAGTGGACAAAATGTTTGCGGTGGTTTTATGTTCGCGATGA
AATGTTTGCCGCGAAAACCGCGAATATAAAACTACAGCGAAAATTTCTGC
ATTAACAGTAACTGATTTTTTTGGTCAATTTCACAGATTCCAATACACAG
ATTTAAAGAAAGCTAACTCCGGAGGTATGCGTGCTTGGCTGGCCCAGCTC
TTTGGCCGTGGGAAACATGCTACATCTGAAGACAAGTTGCGAGAGCCTGG
GAAGGAGAGTGAGGACCCTGGGGAGGAGAGCGAAACCTCTGAGGAGAATG
ACTACATTGGAGAGCAGAGAGAATTAGTAACTCCGAGAGTCAGAGCAGAG
AGTGACAAAAAGGATAGATGATAGGTCTTACAGACATGGTTTTGTAGAGA
AGACATAATGTTACATGAAGATGCTTTTTGAATGCAGACATATTGTGATA
TCAACTGACTTTGATAAAATTGCTTATGTTGTATTTAGAGAAAATATTAC
CGGTATGTCTTCTTCCTGCTTGCTCTCCAAAAGCTAGAGAGTAAGGACAG
ATCAGGAAAATGTATCTTTGCGTACTCTCCAAGCAGAGGTTAGTGGAGAG
GATCGTGACCCTTTTGATTTTATCCTCAAAAGAAACGGGGCAGAGGATAA
AAAGGTCACAATCTTTTGCTTGGAGAGTATCTTTGCTGCCTTCAGTATGT
ACATGTAATCTTGTGTGCAATATGAACAGTCAAAGTCAAACCCTGTATAA
GTGACCACCTCTACATTGTGACCACTTTTTGGTGATCCTGTAGAACTAGT
AGTATACGTGTTACGTTAAGCTGAACATATTGAATTACCCGGTGGATATA
CTTGTACGTATATTCTTTTGCATCCACTTGTTTGTTTGCATGTATAGTTG
TAGACCTTACGAAAGTCGCTGTACTTTTGTTATGTCGATAAAGATTTTTT
GTGCTTTTATCTTAATCACTGATAACAGATTAGCTTTCATTTTATTGGTA
TACCCTTTGCATGATGTACTCATACATGTAGCATTACAGGGTTCAAGATC
TGCCATAACTTGGTACATACATACTAACAAGTTAAGTAAAAAAAATGGAC
AGAATTTCGAAGTCCACATATTCTTGGCGTTACAGTATGTTTACACAAGG
GATCAATGTGTAGAAAACTATTGCAAGGTCCACCAGCTGCAAATGACACT
CGACTCTGAACCATCAGTAAACAAAGCAGAATCTGTTCTAACACAACTTG
CAACAATAGGTCCAATGACAGGACAAGAAATGTTTAAATACACATCCTTT
GAAATGAAACTTTAAGGACAACTTTAGTCTACATGAATACATGACAATAT
GCTTGTTAAACTGTGTAGACATGAAAATACAAATTTGCTGCCAGGGTTGT
CTTAGTTTGTGCCTCTGCAGTCACAGCCAAACTACAGCATGGACAGCTTT
ACCATGTAGAAAAAAGGGCTGTTCCAAAAACAATTCAGGGGGTACTTGTT
CCAACACACTATAGTCTAGGCGATTGGTGCAAAAATTGTTCAAATTATGG
TAAAAGCATGAAACTTGGCATATATGTTCTGTACAACAATACTAGGGGTG
GAGCCATTAGAAACCTGCTCTTACATAGCAACTGCTGCCAGGAATTATTT
TTTTGCTTGGCAAAGGGTGCTTTAGAGAGCCAGTGTCTGTATTTTTGCCT
TAAGACGCCTTAATTTTGCAACAAAATGGCACAGAATTATAGTTGTAACC
AAGACCTACCTCTTTAGACGTGACAATTATTCTTTGAGTGGAAATCTTTT
TTAAATCTGTTTTATTGCATTTATTTGTCAAATTTCTTATAAACTACAGT
GTT Coding sequence (CDS) from alignment at xfSc0003130:1..1953- >transcript:BL78626_cuf0 ID=transcript:BL78626_cuf0|Name=transcript:BL78626_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=426bp|location=Sequence derived from alignment at xfSc0003130:1..1953- (Branchiostoma lanceolatum)
ATGTATAGTTGTAGACCTTACGAAAGTCGCTGTACTTTTGTTATGTCGAT
AAAGATTTTTTGTGCTTTTATCTTAATCACTGATAACAGATTAGCTTTCA
TTTTATTGGTATACCCTTTGCATGATGTACTCATACATGTAGCATTACAG
GGTTCAAGATCTGCCATAACTTGGTACATACATACTAACAAGTTAAGTAA
AAAAAATGGACAGAATTTCGAAGTCCACATATTCTTGGCGTTACAGTATG
TTTACACAAGGGATCAATGTGTAGAAAACTATTGCAAGGTCCACCAGCTG
CAAATGACACTCGACTCTGAACCATCAGTAAACAAAGCAGAATCTGTTCT
AACACAACTTGCAACAATAGGTCCAATGACAGGACAAGAAATGTTTAAAT
ACACATCCTTTGAAATGAAACTTTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| xfSc0003130 | genome | xfSc0003130:1..1953 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL78626_cuf0 |
| Biotype | protein_coding |
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