TCONS_00042344 (transcript) - C. hemisphaerica

Overview
NameTCONS_00042344
Unique NameTCONS_00042344
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length155

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00042344 ID=TCONS_00042344|Name=TCONS_00042344|organism=Clytia hemisphaerica|type=transcript|length=155bp
aaatcttttttaacGTTATCCTTATGACCCAAATGACAAGTTAAATCATA
TTCATATCcataaatgtttttcatttaaatCTCTCAATCTTTTATCCACC
AATGACACATCATTACCaacatttttttactttgatatttttgtattatt
taaAG
Run BLAST on NCBI

transcript from alignment at sc0003351:11438..11592

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00042344 ID=TCONS_00042344|Name=TCONS_00042344|organism=Clytia hemisphaerica|type=transcript|length=155bp|location=Sequence derived from alignment at sc0003351:11438..11592 (Clytia hemisphaerica)
CTttaaataatacaaaaatatcaaagtaaaaaaatgttGGTAATGATGTG
TCATTGGTGGATAAAAGATTGAGAGatttaaatgaaaaacatttatgGAT
ATGAATATGATTTAACTTGTCATTTGGGTCATAAGGATAACgttaaaaaa
gattt
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_026190XLOC_026190Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00042344-exon-sc0003351-1491911889:11438..11592TCONS_00042344-exon-sc0003351-1491911889:11438..11592Clytia hemisphaericaexon
TCONS_00042344-exon-sc0003351-1510915933:11438..11592TCONS_00042344-exon-sc0003351-1510915933:11438..11592Clytia hemisphaericaexon
TCONS_00042344-exon-sc0003351-1575043694:11438..11592TCONS_00042344-exon-sc0003351-1575043694:11438..11592Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0003351supercontigsc0003351:11438..11592 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00042344 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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